Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18k06
(681 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 28 0.072
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 28 0.072
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 28 0.072
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 28 0.072
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 26 0.38
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 25 0.51
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 25 0.67
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 24 1.2
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 24 1.5
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 24 1.5
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 24 1.5
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 3.6
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 3.6
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 23 3.6
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 4.7
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 6.2
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 8.2
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 28.3 bits (60), Expect = 0.072
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 561 RYPYNHNIY*IKLYYKDRHIEKI 629
+Y YN+N Y KLYY +IE+I
Sbjct: 96 KYNYNNNNYNKKLYYNINYIEQI 118
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 28.3 bits (60), Expect = 0.072
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 561 RYPYNHNIY*IKLYYKDRHIEKI 629
+Y YN+N Y KLYY +IE+I
Sbjct: 96 KYNYNNNNYNKKLYYNINYIEQI 118
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 28.3 bits (60), Expect = 0.072
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 561 RYPYNHNIY*IKLYYKDRHIEKI 629
+Y YN+N Y KLYY +IE+I
Sbjct: 96 KYNYNNNNYNKKLYYNINYIEQI 118
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 28.3 bits (60), Expect = 0.072
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 561 RYPYNHNIY*IKLYYKDRHIEKI 629
+Y YN+N Y KLYY +IE+I
Sbjct: 96 KYNYNNNNYNKKLYYNINYIEQI 118
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 25.8 bits (54), Expect = 0.38
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 552 SQRRYPYNHNIY*IKLYYKD 611
+ Y YN+N Y KLYYK+
Sbjct: 325 NNNNYKYNYNNYNKKLYYKN 344
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.4 bits (53), Expect = 0.51
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 561 RYPYNHNIY*IKLYYKD 611
+Y YN+N Y KLYYK+
Sbjct: 103 KYNYNNNNYNKKLYYKN 119
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.67
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 552 SQRRYPYNHNIY*IKLYYKDRHIEKI 629
+ Y YN+N KLYY +IE+I
Sbjct: 92 NNNNYKYNYNNNCKKLYYNINYIEQI 117
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 564 YPYNHNIY*IKLYYKDRHIEKI 629
Y N+N Y KLYY +IE+I
Sbjct: 97 YNNNYNNYNKKLYYNINYIEQI 118
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 23.8 bits (49), Expect = 1.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 37 YYSYVVCYNIIP 2
YY+Y CYN+ P
Sbjct: 215 YYAYPYCYNLTP 226
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 570 YNHNIY*IKLYYKDRHIEKI 629
YN+N Y KLYY +IE+I
Sbjct: 103 YNNNNYNKKLYYNIINIEQI 122
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 570 YNHNIY*IKLYYKDRHIEKI 629
YN+N Y KLYY +IE+I
Sbjct: 103 YNNNNYNKKLYYNIINIEQI 122
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 573 NHNIY*IKLYYKDRHIEKI 629
N+N Y KLYY +IE+I
Sbjct: 98 NNNNYNKKLYYNINYIEQI 116
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 573 NHNIY*IKLYYKDRHIEKI 629
N+N Y KLYY +IE+I
Sbjct: 336 NNNNYNKKLYYNINYIEQI 354
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 22.6 bits (46), Expect = 3.6
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 192 AICSVGDLLETMPSDKKKYLQLLAL*EIS*IKLTILFTYTIIYCFLQFSE 341
A ++ ++ T+PSDK +Q L L I F + +++C ++ +E
Sbjct: 272 AFAALRKIIPTLPSDKLSKIQTLKL-----ATRYIDFLFQVLHCNMENTE 316
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 4.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = -1
Query: 198 ILPKMLLHWKWTNIN*LNKKICNSDEL 118
I+ L+HW WT + + + N +
Sbjct: 168 IVQPFLIHWIWTPHGWMRRNVLNKQHV 194
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 6.2
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 216 RGHRLNILPKMLLHWKWTNI 157
RG + LPK+ W TN+
Sbjct: 95 RGQPADALPKLFKEWGTTNL 114
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1
Query: 222 FPRGHRLNILPKMLL 178
FPR HR LP+ L
Sbjct: 68 FPRSHRFKSLPRCQL 82
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,857
Number of Sequences: 438
Number of extensions: 4118
Number of successful extensions: 23
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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