Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18k02
(833 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 155 3e-38
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 103 1e-22
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 102 4e-22
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 102 4e-22
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 102 4e-22
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 100 1e-21
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 100 1e-21
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 100 1e-21
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 99 2e-21
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 99 2e-21
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 99 2e-21
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 98 8e-21
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 98 8e-21
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 98 8e-21
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 95 6e-20
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 94 1e-19
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 94 1e-19
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 93 2e-19
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 93 2e-19
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 93 2e-19
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 92 4e-19
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 91 9e-19
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 91 9e-19
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 85 8e-17
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 83 3e-16
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 83 3e-16
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 81 1e-15
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 78 7e-15
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 77 1e-14
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 75 5e-14
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 75 6e-14
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 75 8e-14
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 75 8e-14
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 73 2e-13
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 72 4e-13
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 72 4e-13
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 69 4e-12
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 64 1e-10
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 64 1e-10
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 62 5e-10
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 60 2e-09
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 60 2e-09
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 58 6e-09
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 58 6e-09
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 58 6e-09
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 57 1e-08
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 57 1e-08
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 56 3e-08
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 56 3e-08
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 53 2e-07
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related h... 44 1e-04
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 42 4e-04
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 42 4e-04
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 42 4e-04
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 42 7e-04
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 41 0.001
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 41 0.001
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 40 0.002
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 37 0.020
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 33 0.25
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr... 32 0.44
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 31 0.77
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 30 2.3
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 29 3.1
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 29 3.1
AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical ... 29 4.1
U23523-5|AAC46556.1| 77|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF043701-5|ABP57822.1| 166|Caenorhabditis elegans Hypothetical ... 28 9.5
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 155 bits (377), Expect = 3e-38
Identities = 70/108 (64%), Positives = 87/108 (80%)
Frame = -2
Query: 796 CMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 617
C+HGDK Q ERD VL +FK G+ I++ATDVAARGLDVD IK+VIN+DYPN+SEDY+HRI
Sbjct: 405 CIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRI 464
Query: 616 GRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 473
GRTGRS KGT+Y FFT +N+ +AKDL+ VL EA Q + L+ MA+R
Sbjct: 465 GRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQALRDMANR 512
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 103 bits (248), Expect = 1e-22
Identities = 49/105 (46%), Positives = 72/105 (68%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+HGD Q ER++ L F+ G A ILVAT VAARGLD+ +K+VIN+D P+ ++Y+HRIG
Sbjct: 457 IHGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDLPSDVDEYVHRIG 516
Query: 613 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 479
RTGR + G + +FF N A++L+ ++ EANQ + L+ M+
Sbjct: 517 RTGRVGNVGLATSFFNDKNRNIARELMDLIVEANQELPDWLEGMS 561
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 102 bits (244), Expect = 4e-22
Identities = 48/110 (43%), Positives = 71/110 (64%)
Frame = -2
Query: 808 LASCCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDY 629
+ S +HGD Q ER+ L F+ G+ ILVAT VAARGLD+ +++VIN+D P S++Y
Sbjct: 423 IRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEY 482
Query: 628 IHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 479
+HRIGRTGR + G + +FF N +DL +++ E+NQ + L +A
Sbjct: 483 VHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQVA 532
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 102 bits (244), Expect = 4e-22
Identities = 48/110 (43%), Positives = 71/110 (64%)
Frame = -2
Query: 808 LASCCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDY 629
+ S +HGD Q ER+ L F+ G+ ILVAT VAARGLD+ +++VIN+D P S++Y
Sbjct: 407 IRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEY 466
Query: 628 IHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 479
+HRIGRTGR + G + +FF N +DL +++ E+NQ + L +A
Sbjct: 467 VHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQVA 516
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 102 bits (244), Expect = 4e-22
Identities = 48/110 (43%), Positives = 71/110 (64%)
Frame = -2
Query: 808 LASCCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDY 629
+ S +HGD Q ER+ L F+ G+ ILVAT VAARGLD+ +++VIN+D P S++Y
Sbjct: 404 IRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEY 463
Query: 628 IHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 479
+HRIGRTGR + G + +FF N +DL +++ E+NQ + L +A
Sbjct: 464 VHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQVA 513
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 100 bits (239), Expect = 1e-21
Identities = 41/89 (46%), Positives = 63/89 (70%)
Frame = -2
Query: 796 CMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 617
C+HGD Q ERD ++ +F+ G + +L+ TD+ ARG+DV + VIN+D P++ E+YIHRI
Sbjct: 297 CLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRI 356
Query: 616 GRTGRSKSKGTSYAFFTPSNSRQAKDLVS 530
GR+GR KG + F T +++RQ K++ S
Sbjct: 357 GRSGRFGRKGVAINFVTENDARQLKEIES 385
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 100 bits (239), Expect = 1e-21
Identities = 41/89 (46%), Positives = 63/89 (70%)
Frame = -2
Query: 796 CMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 617
C+HGD Q ERD ++ +F+ G + +L+ TD+ ARG+DV + VIN+D P++ E+YIHRI
Sbjct: 10 CLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRI 69
Query: 616 GRTGRSKSKGTSYAFFTPSNSRQAKDLVS 530
GR+GR KG + F T +++RQ K++ S
Sbjct: 70 GRSGRFGRKGVAINFVTENDARQLKEIES 98
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 100 bits (239), Expect = 1e-21
Identities = 41/89 (46%), Positives = 63/89 (70%)
Frame = -2
Query: 796 CMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 617
C+HGD Q ERD ++ +F+ G + +L+ TD+ ARG+DV + VIN+D P++ E+YIHRI
Sbjct: 297 CLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRI 356
Query: 616 GRTGRSKSKGTSYAFFTPSNSRQAKDLVS 530
GR+GR KG + F T +++RQ K++ S
Sbjct: 357 GRSGRFGRKGVAINFVTENDARQLKEIES 385
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 99 bits (238), Expect = 2e-21
Identities = 48/105 (45%), Positives = 69/105 (65%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIG
Sbjct: 636 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIG 695
Query: 613 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 479
RTGR + G + +F + S +LV VL +A QI+ +Q A
Sbjct: 696 RTGRVGNSGRATSFISEDCS-LLSELVGVLADAQQIVPDWMQGAA 739
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 99 bits (238), Expect = 2e-21
Identities = 48/105 (45%), Positives = 69/105 (65%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIG
Sbjct: 636 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIG 695
Query: 613 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 479
RTGR + G + +F + S +LV VL +A QI+ +Q A
Sbjct: 696 RTGRVGNSGRATSFISEDCS-LLSELVGVLADAQQIVPDWMQGAA 739
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 99 bits (238), Expect = 2e-21
Identities = 48/105 (45%), Positives = 69/105 (65%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIG
Sbjct: 636 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIG 695
Query: 613 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 479
RTGR + G + +F + S +LV VL +A QI+ +Q A
Sbjct: 696 RTGRVGNSGRATSFISEDCS-LLSELVGVLADAQQIVPDWMQGAA 739
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 97.9 bits (233), Expect = 8e-21
Identities = 45/102 (44%), Positives = 69/102 (67%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIG
Sbjct: 847 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIG 906
Query: 613 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQ 488
RTGR + G + +F + + +LV VL +A+Q++ +Q
Sbjct: 907 RTGRVGNAGRATSFIS-EDCNLLSELVRVLSDADQLVPEWMQ 947
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 97.9 bits (233), Expect = 8e-21
Identities = 45/102 (44%), Positives = 69/102 (67%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIG
Sbjct: 847 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIG 906
Query: 613 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQ 488
RTGR + G + +F + + +LV VL +A+Q++ +Q
Sbjct: 907 RTGRVGNAGRATSFIS-EDCNLLSELVRVLSDADQLVPEWMQ 947
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 97.9 bits (233), Expect = 8e-21
Identities = 45/102 (44%), Positives = 69/102 (67%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIG
Sbjct: 847 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIG 906
Query: 613 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQ 488
RTGR + G + +F + + +LV VL +A+Q++ +Q
Sbjct: 907 RTGRVGNAGRATSFIS-EDCNLLSELVRVLSDADQLVPEWMQ 947
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 95.1 bits (226), Expect = 6e-20
Identities = 40/107 (37%), Positives = 71/107 (66%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+HG ++Q +R+ L + G ILVATD+A+RG+DV I +V+N+D+P E+Y+HR+G
Sbjct: 368 LHGGRSQSDREMSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVG 427
Query: 613 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 473
RTGR+ KG + +F ++ + L+ +L+++ Q + QL+ A++
Sbjct: 428 RTGRAGRKGEAMSFLWWNDRSNFEGLIQILEKSEQEVPDQLRRDAEK 474
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 94.3 bits (224), Expect = 1e-19
Identities = 47/105 (44%), Positives = 66/105 (62%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+HGD Q ER+E L +F++ ++ ILVATDVAARGLD+ I+ VINFD + ++HRIG
Sbjct: 541 LHGDMLQAERNENLLKFRK-KSQILVATDVAARGLDISEIRTVINFDMARDIDTHVHRIG 599
Query: 613 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 479
RTGR+ KGT+Y T + LV L+ +Q + L +A
Sbjct: 600 RTGRAGHKGTAYTLVTEKDIEMVGHLVKNLESVSQEVPKPLMDLA 644
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 93.9 bits (223), Expect = 1e-19
Identities = 45/93 (48%), Positives = 58/93 (62%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+HG K Q +R+ L KEG + ILVATDVA RG+DV + V+N+D S EDY HRIG
Sbjct: 603 LHGGKGQDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIG 662
Query: 613 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEA 515
RTGR+ G + F TP ++ DL VL E+
Sbjct: 663 RTGRAGKHGKAITFLTPDDTAVYFDLKQVLVES 695
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 93.1 bits (221), Expect = 2e-19
Identities = 49/113 (43%), Positives = 67/113 (59%)
Frame = -2
Query: 820 KEIWLASCCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNS 641
KE MHGD Q++RDEV+ +F+ G +L++TDV ARGLDV + VIN+D PN+
Sbjct: 286 KEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNN 345
Query: 640 SEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 482
E YIHRIGR+GR KG + F +D V +L++ Q S Q+ M
Sbjct: 346 RELYIHRIGRSGRFGRKGVAINFV-------KQDDVRILRDIEQYYSTQIDEM 391
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 93.1 bits (221), Expect = 2e-19
Identities = 49/113 (43%), Positives = 67/113 (59%)
Frame = -2
Query: 820 KEIWLASCCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNS 641
KE MHGD Q++RDEV+ +F+ G +L++TDV ARGLDV + VIN+D PN+
Sbjct: 286 KEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNN 345
Query: 640 SEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 482
E YIHRIGR+GR KG + F +D V +L++ Q S Q+ M
Sbjct: 346 RELYIHRIGRSGRFGRKGVAINFV-------KQDDVRILRDIEQYYSTQIDEM 391
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 93.1 bits (221), Expect = 2e-19
Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+HG K Q +R + F++ +LVATDVA++GLD GI++VINFD P E+Y+HRIG
Sbjct: 471 IHGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENYVHRIG 530
Query: 613 RTGRSKSKGTSYAFFTPSNSRQA-KDLVSVLQEANQIISPQLQSMA 479
RTGRS KG + F + DL +L EA Q + L+ +A
Sbjct: 531 RTGRSGRKGLATTFINKKSEMSVLSDLKQLLAEAGQELPEFLKMLA 576
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 92.3 bits (219), Expect = 4e-19
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+HG Q +RD + FK G +LVAT VAARGLDV + V+N+D PN EDY+HR+G
Sbjct: 582 LHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVG 641
Query: 613 RTGRSKSKGTSYAFFTPSN-SRQAKDLVSVLQEANQIISPQLQSMADR 473
RTGR+ KG +Y F P + + A ++ + A L++M +R
Sbjct: 642 RTGRAGRKGYAYTFVLPEHQEKMAGEICRAFETAGCKPPADLKAMFER 689
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 91.1 bits (216), Expect = 9e-19
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+HG + Q+ER L F+ G +L+AT V RGLD+ G+ +VIN+D PN+ +DYIHRIG
Sbjct: 593 IHGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIG 652
Query: 613 RTGRSKSKGTSYAFFTPSNSRQ-AKDLVSVLQEANQIISPQLQSMA 479
RTGR + G + +F + ++ Q LV L +A Q++ ++ A
Sbjct: 653 RTGRVGNSGRATSFISLADDVQILPQLVRTLADAEQVVPSWMKEAA 698
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 91.1 bits (216), Expect = 9e-19
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+HG + Q+ER L F+ G +L+AT V RGLD+ G+ +VIN+D PN+ +DYIHRIG
Sbjct: 593 IHGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIG 652
Query: 613 RTGRSKSKGTSYAFFTPSNSRQ-AKDLVSVLQEANQIISPQLQSMA 479
RTGR + G + +F + ++ Q LV L +A Q++ ++ A
Sbjct: 653 RTGRVGNSGRATSFISLADDVQILPQLVRTLADAEQVVPSWMKEAA 698
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 84.6 bits (200), Expect = 8e-17
Identities = 36/104 (34%), Positives = 63/104 (60%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
++ K+ +ERDE + +F+ G +LV T++ RGLD+ + VIN+D P S YIHR+G
Sbjct: 405 INSGKSDKERDETMERFRRGEIWVLVCTELLGRGLDLSDVGLVINYDLPTSIVSYIHRVG 464
Query: 613 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 482
RTGR+ G + +FT ++ + K + +V++++ + L M
Sbjct: 465 RTGRAGKSGHAVTYFTDADMKYIKSIATVIRQSGFDVPEYLMEM 508
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 82.6 bits (195), Expect = 3e-16
Identities = 41/103 (39%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Frame = -2
Query: 808 LASCCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYP--NSSE 635
+++ MH + Q++RD L F+ G+ +VA++V ARGL++ G+ +V+N+D P N +
Sbjct: 1027 VSTISMHSYQNQEQRDRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMPDKNGFD 1086
Query: 634 DYIHRIGRTGRSKSKGTSYAFFTPSNSRQ-AKDLVSVLQEANQ 509
+Y++RIGRTGR+ GTS AF N LVS+L EA +
Sbjct: 1087 EYVNRIGRTGRAGFTGTSTAFVDVENDTDIIPCLVSILNEAKK 1129
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 82.6 bits (195), Expect = 3e-16
Identities = 41/103 (39%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Frame = -2
Query: 808 LASCCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYP--NSSE 635
+++ MH + Q++RD L F+ G+ +VA++V ARGL++ G+ +V+N+D P N +
Sbjct: 1027 VSTISMHSYQNQEQRDRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMPDKNGFD 1086
Query: 634 DYIHRIGRTGRSKSKGTSYAFFTPSNSRQ-AKDLVSVLQEANQ 509
+Y++RIGRTGR+ GTS AF N LVS+L EA +
Sbjct: 1087 EYVNRIGRTGRAGFTGTSTAFVDVENDTDIIPCLVSILNEAKK 1129
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = -2
Query: 808 LASCCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDY 629
L++ C+HGD++ +ER L FK+G LV +DV ARGLDV G+ +VI+ P+ Y
Sbjct: 530 LSAACLHGDRSAEERQSSLEGFKKGIIRFLVCSDVVARGLDVQGVPFVISVTLPDEKSMY 589
Query: 628 IHRIGRTGRSKSKGTS 581
+HRIGR GR++ G S
Sbjct: 590 VHRIGRVGRAERMGLS 605
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 78.2 bits (184), Expect = 7e-15
Identities = 35/85 (41%), Positives = 54/85 (63%)
Frame = -2
Query: 820 KEIWLASCCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNS 641
+++ + + +HG +Q++R L +FK ILV TDVAARGLD+ + VIN+D P+
Sbjct: 304 RQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQ 363
Query: 640 SEDYIHRIGRTGRSKSKGTSYAFFT 566
S+DY+HR+GRT R+ G + T
Sbjct: 364 SKDYVHRVGRTARAGRSGIAITVVT 388
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 77.4 bits (182), Expect = 1e-14
Identities = 35/88 (39%), Positives = 55/88 (62%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
M TQ +R E L +FK+ +LV+TD+A+RGLD++G++ VIN + P S + YIHR+G
Sbjct: 447 MQSSLTQGQRIESLSKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHRVG 506
Query: 613 RTGRSKSKGTSYAFFTPSNSRQAKDLVS 530
RT R+ G S + + K++V+
Sbjct: 507 RTARAGKAGRSISLVGEDERKLLKEIVN 534
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 75.4 bits (177), Expect = 5e-14
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSED-----Y 629
+HGD++Q R++++ FK R ++LV TD+ +RG+DV + VINFD P+ D +
Sbjct: 676 LHGDRSQDMREKLINDFKSNRVNLLVTTDLLSRGIDVSDLDRVINFDLPDGDPDQGADTF 735
Query: 628 IHRIGRTGRS--KSKGTSYAFFTPSNSRQA 545
IHR GRTGR+ K G +F P + R +
Sbjct: 736 IHRAGRTGRTGRKENGLCVSFVDPQSDRDS 765
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 74.9 bits (176), Expect = 6e-14
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = -2
Query: 787 GDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRT 608
G Q++R E +F E +A++L+ATDVA+RGLD + I +VI D P +DYIHR+GR+
Sbjct: 354 GTMNQKKRIETFTKFDESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRS 413
Query: 607 GRSKSKGTSYAFFTPS 560
R G S +PS
Sbjct: 414 ARMDDSGNSLLMVSPS 429
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 74.5 bits (175), Expect = 8e-14
Identities = 37/91 (40%), Positives = 55/91 (60%)
Frame = -2
Query: 820 KEIWLASCCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNS 641
K + + +H Q++R + L +F E + ++L+ATDVAARGLD+ GI +VI++ P
Sbjct: 294 KSVNIDPMILHAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKK 353
Query: 640 SEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQ 548
E YIHR GRT R+ +G + P SRQ
Sbjct: 354 VEIYIHRSGRTARASHRGLTVVLVDPP-SRQ 383
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 74.5 bits (175), Expect = 8e-14
Identities = 37/91 (40%), Positives = 55/91 (60%)
Frame = -2
Query: 820 KEIWLASCCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNS 641
K + + +H Q++R + L +F E + ++L+ATDVAARGLD+ GI +VI++ P
Sbjct: 461 KSVNIDPMILHAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKK 520
Query: 640 SEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQ 548
E YIHR GRT R+ +G + P SRQ
Sbjct: 521 VEIYIHRSGRTARASHRGLTVVLVDPP-SRQ 550
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/88 (36%), Positives = 50/88 (56%)
Frame = -2
Query: 829 KEHKEIWLASCCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDY 650
K+ EI + +H Q R+ V + F++G LV +D+ RG+D+ + VINFD+
Sbjct: 298 KKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDF 357
Query: 649 PNSSEDYIHRIGRTGRSKSKGTSYAFFT 566
P ++E Y+HRIGR+GR G + T
Sbjct: 358 PRNAETYLHRIGRSGRFGHLGVAINLIT 385
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 72.1 bits (169), Expect = 4e-13
Identities = 36/92 (39%), Positives = 52/92 (56%)
Frame = -2
Query: 802 SCCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIH 623
S +H Q+ER FK+ + ILVATD+ RG+D++ + V N+D P S+ Y+H
Sbjct: 310 SIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLH 369
Query: 622 RIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSV 527
R+ R GR +KG + F + N AK L SV
Sbjct: 370 RVARAGRFGTKGLAITFVSDEN--DAKTLNSV 399
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 72.1 bits (169), Expect = 4e-13
Identities = 36/92 (39%), Positives = 52/92 (56%)
Frame = -2
Query: 802 SCCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIH 623
S +H Q+ER FK+ + ILVATD+ RG+D++ + V N+D P S+ Y+H
Sbjct: 302 SIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLH 361
Query: 622 RIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSV 527
R+ R GR +KG + F + N AK L SV
Sbjct: 362 RVARAGRFGTKGLAITFVSDEN--DAKTLNSV 391
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 68.9 bits (161), Expect = 4e-12
Identities = 27/64 (42%), Positives = 42/64 (65%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+HG + QQ+R +QF + IL+ TDVAARGLD+ + +++ +D + +YIHR+G
Sbjct: 344 IHGKQKQQKRTTTFFQFCQAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREYIHRVG 403
Query: 613 RTGR 602
RT R
Sbjct: 404 RTAR 407
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/104 (30%), Positives = 56/104 (53%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+H Q++R L F+ +++ TDVA+RGLD+ + V+N + P + YIHR+G
Sbjct: 367 LHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVG 426
Query: 613 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 482
R+ R+ G++ +F T + V +LQ Q+I +L +
Sbjct: 427 RSARAGRFGSALSFVTQYD-------VELLQAVEQVIGKKLDEL 463
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/104 (30%), Positives = 56/104 (53%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+H Q++R L F+ +++ TDVA+RGLD+ + V+N + P + YIHR+G
Sbjct: 367 LHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVG 426
Query: 613 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 482
R+ R+ G++ +F T + V +LQ Q+I +L +
Sbjct: 427 RSARAGRFGSALSFVTQYD-------VELLQAVEQVIGKKLDEL 463
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 62.1 bits (144), Expect = 5e-10
Identities = 29/87 (33%), Positives = 48/87 (55%)
Frame = -2
Query: 796 CMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 617
C HG+ ER++++ F +LV TD+ ARG+++ +IN+D + E+Y+ R
Sbjct: 256 CFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMNIRK-SLIINYDVSGNMENYMLRN 314
Query: 616 GRTGRSKSKGTSYAFFTPSNSRQAKDL 536
GR G SKG +FFT ++ K +
Sbjct: 315 GRQGNFGSKGLPISFFTENDISDLKKI 341
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/78 (38%), Positives = 46/78 (58%)
Frame = -2
Query: 742 KEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 563
K +AS L +RG+D + V+NFD+P +++ YIHR+GRT R +KGT+ +F P
Sbjct: 355 KGKKASKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIP 414
Query: 562 SNSRQAKDLVSVLQEANQ 509
S + L + +E NQ
Sbjct: 415 S---ERAHLEQIQEEINQ 429
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/78 (38%), Positives = 46/78 (58%)
Frame = -2
Query: 742 KEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 563
K +AS L +RG+D + V+NFD+P +++ YIHR+GRT R +KGT+ +F P
Sbjct: 422 KGKKASKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIP 481
Query: 562 SNSRQAKDLVSVLQEANQ 509
S + L + +E NQ
Sbjct: 482 S---ERAHLEQIQEEINQ 496
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 614
+HG + R + F + ++++TDV ARG+D+ I +VI FD P S ++HR G
Sbjct: 289 VHGKCSNPHRASQIKAFSDSTNGVMISTDVMARGIDISDIDWVIQFDLPKHSSWFVHRAG 348
Query: 613 RTGRSKSKGTS 581
RT R +G +
Sbjct: 349 RTARCGREGNA 359
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 58.4 bits (135), Expect = 6e-09
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 17/113 (15%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYP----------- 647
+HGD T ER + + FK G +L+ T+V ARG+DV + VIN+D P
Sbjct: 485 LHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMV 544
Query: 646 ------NSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQI 506
E Y+HRIGRTGR G + +S + ++++VL+ Q+
Sbjct: 545 VDGFTQPDCETYLHRIGRTGRFGKTGIAINLI---DSEDSMNMINVLENHFQM 594
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 58.4 bits (135), Expect = 6e-09
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 17/113 (15%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYP----------- 647
+HGD T ER + + FK G +L+ T+V ARG+DV + VIN+D P
Sbjct: 510 LHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMV 569
Query: 646 ------NSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQI 506
E Y+HRIGRTGR G + +S + ++++VL+ Q+
Sbjct: 570 VDGFTQPDCETYLHRIGRTGRFGKTGIAINLI---DSEDSMNMINVLENHFQM 619
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 58.4 bits (135), Expect = 6e-09
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 17/113 (15%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYP----------- 647
+HGD T ER + + FK G +L+ T+V ARG+DV + VIN+D P
Sbjct: 894 LHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMV 953
Query: 646 ------NSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQI 506
E Y+HRIGRTGR G + +S + ++++VL+ Q+
Sbjct: 954 VDGFTQPDCETYLHRIGRTGRFGKTGIAINLI---DSEDSMNMINVLENHFQM 1003
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = -2
Query: 778 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 599
+Q++R + Q + R ILV++D+ ARG+D D + V+N D + E Y HRIGR R
Sbjct: 294 SQKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAARF 353
Query: 598 KSKGTS 581
+ G +
Sbjct: 354 GAHGAA 359
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = -2
Query: 778 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 599
+Q++R + Q + R ILV++D+ ARG+D D + V+N D + E Y HRIGR R
Sbjct: 294 SQKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAARF 353
Query: 598 KSKGTS 581
+ G +
Sbjct: 354 GAHGAA 359
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = -2
Query: 754 LYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYA 575
+ +F E + +ILV TDVAARG+D+ + VIN +P ++ ++HR+GR R+ GT+ +
Sbjct: 308 IQKFHEKQNNILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAIS 367
Query: 574 FFTPSNSRQAKDLVSVL 524
DL L
Sbjct: 368 LIANDELPYLTDLFMFL 384
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = -2
Query: 754 LYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYA 575
+ +F E + +ILV TDVAARG+D+ + VIN +P ++ ++HR+GR R+ GT+ +
Sbjct: 308 IQKFHEKQNNILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAIS 367
Query: 574 FFTPSNSRQAKDLVSVL 524
DL L
Sbjct: 368 LIANDELPYLTDLFMFL 384
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/106 (25%), Positives = 49/106 (46%)
Frame = -2
Query: 820 KEIWLASCCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNS 641
+ I + S H T+ +R++ F + + +VAT G+D ++ VI++ PN+
Sbjct: 467 RRIGVRSAHYHAGLTKNQREKAHTDFMRDKITTIVATVAFGMGIDKPDVRNVIHYGCPNN 526
Query: 640 SEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQII 503
E Y IGR GR S F+ P + K + Q+ +++
Sbjct: 527 IESYYQEIGRAGRDGSPSICRVFWAPKDLNTIKFKLRNSQQKEEVV 572
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 52.4 bits (120), Expect = 4e-07
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = -2
Query: 772 QERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKS 593
+ R ++L +F + +L+ +DV ARG D++ + VIN++ P + ++HR GRTGR+
Sbjct: 436 KRRYKMLEKFNKNENRVLICSDVLARGTDLNKVDCVINYNLPADDKLFVHRAGRTGRAGQ 495
Query: 592 KG 587
G
Sbjct: 496 DG 497
>U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related
helicase protein 2 protein.
Length = 620
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = -2
Query: 778 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 599
++Q++ E L F +G ILV+T VA GLD+ VI ++Y + ++ R GR
Sbjct: 333 SKQKQMEKLKMFADGENQILVSTSVAEEGLDIPECSLVIKYNYATNETAHVQRRGRARAR 392
Query: 598 KSK 590
SK
Sbjct: 393 NSK 395
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical protein
D2005.5 protein.
Length = 1119
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/88 (28%), Positives = 43/88 (48%)
Frame = -2
Query: 781 KTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 602
+T QE+ L +F GR ++VAT V GLDV +I Y SS I + + GR
Sbjct: 811 QTSQEQQLTLDKFNNGRLKVIVATSVVEEGLDVTACNLIIK--YNCSSGSAIQLVQQRGR 868
Query: 601 SKSKGTSYAFFTPSNSRQAKDLVSVLQE 518
+++K + + +S + +++ E
Sbjct: 869 ARAKNSRSVLLSVKSSINETETNALISE 896
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -2
Query: 721 LVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTS 581
+V T++ ARG+DV +K+ I + + Y HRIGR GR G S
Sbjct: 430 VVCTNILARGIDVSSVKHTIIMEMSADFDTYKHRIGRVGRDGCGGKS 476
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = -2
Query: 778 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 599
++Q++ E L F +G ILV+T VA GLDV VI ++Y + ++ R GR GR+
Sbjct: 751 SKQKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATNEIAHVQRRGR-GRA 809
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = -2
Query: 778 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 599
++Q++ E L F +G ILV+T VA GLDV VI ++Y + ++ R GR GR+
Sbjct: 751 SKQKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATNEIAHVQRRGR-GRA 809
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -2
Query: 772 QERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKS 593
+ + EVL +F + L+AT V G+DV VI FD P Y+ GR R+ S
Sbjct: 440 KRQTEVLRRFHRNEINCLIATSVLEEGVDVKQCNLVIKFDRPLDMRSYVQSKGRARRAGS 499
Query: 592 K 590
+
Sbjct: 500 R 500
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -2
Query: 736 GRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFF 569
G+ ++VAT G+D +++VI+ P S E+Y GR GR T ++
Sbjct: 358 GKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYY 413
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -2
Query: 736 GRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFF 569
G+ ++VAT G+D +++VI+ P S E+Y GR GR T ++
Sbjct: 381 GKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYY 436
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -2
Query: 721 LVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 587
+V T++ +RG+DV +K I + Y+HRIGR GR G
Sbjct: 428 VVCTNIMSRGIDVSSVKQTIIMEMSTDFPSYMHRIGRVGRDGCGG 472
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -2
Query: 721 LVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 599
+V T++ ARG+DV +K+ I + + Y HRIGR S
Sbjct: 277 VVCTNILARGIDVSSVKHTIIMEMSADFDTYKHRIGRVSIS 317
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = -2
Query: 793 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVIN 659
+H + +E+D+V Q G +++T+VA + +DGI++VI+
Sbjct: 345 LHSTLSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFVID 389
>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical
protein W03A3.2 protein.
Length = 1540
Score = 32.3 bits (70), Expect = 0.44
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -2
Query: 790 HGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFD--YPN--SSEDYIH 623
H T +ER+ + F+E ILVAT A G+++ + +I P+ +S +Y
Sbjct: 206 HAGLTMEERECIELGFREKNIVILVATSTLASGVNLPAERVLIKAQPRGPSALTSLNYRQ 265
Query: 622 RIGRTGRS--KSKGTSY 578
+GR GR+ ++G +Y
Sbjct: 266 MVGRAGRTGHATRGETY 282
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = -2
Query: 829 KEHKEIWLASCCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDY 650
K +W+ C +G +E+ + G ++VAT++A + + GI YVI+ Y
Sbjct: 324 KNCDRLWVVPC--YGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGY 381
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 629 VILRRIWIIKIYYIF-DTINIKPSS-CNISCYKNTSTTFLELIQNFISFLLSFIAMHATA 802
V++ + W+ +Y DT PS C + C S + + F F +SF+A H+TA
Sbjct: 1314 VLVEKEWLAFGHYFHKDTETSSPSFICFLDCVYQISQQYPTAFE-FSYFYISFLAYHSTA 1372
Query: 803 G 805
G
Sbjct: 1373 G 1373
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -2
Query: 736 GRASILVATDVAARGLDVDGIKYVIN 659
G+ +++AT++A L +DGI YV++
Sbjct: 806 GKRKVVIATNIAETSLTIDGIFYVVD 831
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -2
Query: 736 GRASILVATDVAARGLDVDGIKYVIN 659
G+ +++AT++A L +DGI YV++
Sbjct: 806 GKRKVVIATNIAETSLTIDGIFYVVD 831
>AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical
protein Y105C5A.1 protein.
Length = 767
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 319 ILFNSRQIVCNHCRPPFGYSCQNCFRV*KSRHHLGHLHRIC-SCSTRRHHHRNGRPSTAV 495
++ N + +CN+ + Y C NC + KS G ++C C T + N RP+ V
Sbjct: 488 VVCNCAEKLCNNLKFEPRYGCTNCKKNVKSSSDHGATEKLCLICQTYQKLTGNVRPARNV 547
>U23523-5|AAC46556.1| 77|Caenorhabditis elegans Hypothetical
protein F53A9.1 protein.
Length = 77
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 412 HHLGHLHRICSCSTRRHHHRNG 477
HH G LH + T HHH +G
Sbjct: 49 HHHGFLHELGHAMTGHHHHHHG 70
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -3
Query: 585 HHMLSLPLQIPVKPKIWYLFYKKLIRLLAHNCSRW 481
+++++LP+ + K W+LFY I+ + H+ W
Sbjct: 580 NYLVTLPIGVIRKASTWFLFYDD-IQKIVHSLQNW 613
>AF043701-5|ABP57822.1| 166|Caenorhabditis elegans Hypothetical
protein K12C11.7 protein.
Length = 166
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +2
Query: 704 NISCYKNTSTTFLELIQNFISFLLSFIAM 790
+IS +++ +++FL +QNF+ + L +AM
Sbjct: 100 SISSWRHFASSFLFFLQNFVDYSLMLVAM 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,360,496
Number of Sequences: 27780
Number of extensions: 343764
Number of successful extensions: 958
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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