Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18j16
(685 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 27 0.17
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 27 0.17
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 27 0.17
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 24 1.2
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 2.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.6
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 22 4.7
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 8.3
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 8.3
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 21 8.3
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 8.3
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 21 8.3
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 27.1 bits (57), Expect = 0.17
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 517 ECNEFL-DGDVDLVPIDCATIHDAQYCIKHVGRFE 416
EC+E D V +P+ C + D CI+ VG+ E
Sbjct: 45 ECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKE 79
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 27.1 bits (57), Expect = 0.17
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 517 ECNEFL-DGDVDLVPIDCATIHDAQYCIKHVGRFE 416
EC+E D V +P+ C + D CI+ VG+ E
Sbjct: 45 ECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKE 79
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 27.1 bits (57), Expect = 0.17
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 517 ECNEFL-DGDVDLVPIDCATIHDAQYCIKHVGRFE 416
EC+E D V +P+ C + D CI+ VG+ E
Sbjct: 45 ECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKE 79
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1
Query: 493 HRLKTHCIRTDYSNQYQNIDNSLYYKL 573
+ ++T+ + T+YS++Y N YKL
Sbjct: 195 NNIETYIVNTNYSSKYMREYNDPEYKL 221
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 523 DYSNQYQNIDNSLYYKL 573
+Y+N Y N + LYY +
Sbjct: 96 NYNNNYNNYNKKLYYNI 112
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 622 SCLTFSILFVSFTTFKT 572
SC+ F +LFV F+ +T
Sbjct: 15 SCVIFGVLFVLFSFLRT 31
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 622 SCLTFSILFVSFTTFKT 572
SC+ F +LFV F+ +T
Sbjct: 15 SCVIFGVLFVLFSFLRT 31
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 22.2 bits (45), Expect = 4.7
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -1
Query: 499 DGDVDLVPIDCATIHDAQYCIKHVG 425
+G +++ I ++ D +YCI H+G
Sbjct: 21 NGINEILKIMAVSMKDIRYCIIHMG 45
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 523 DYSNQYQNIDNSLYYKLF 576
+Y+N Y N N+ Y KL+
Sbjct: 100 NYNNNYNNNYNNNYKKLY 117
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 523 DYSNQYQNIDNSLYYKLF 576
+Y+N Y N N+ Y KL+
Sbjct: 100 NYNNNYNNNYNNNYKKLY 117
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 21.4 bits (43), Expect = 8.3
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -2
Query: 504 F*TVMLTWYPLIVL 463
F +M+ W+PL+V+
Sbjct: 207 FGMIMMYWFPLVVI 220
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 529 SNQYQNIDNSLYYK 570
+N Y N + LYYK
Sbjct: 335 NNNYNNYNKKLYYK 348
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.4 bits (43), Expect = 8.3
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 505 THCIRTDYSNQYQNIDN 555
THC+ + ++ QN +N
Sbjct: 412 THCVNNNQNDNIQNTNN 428
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,804
Number of Sequences: 438
Number of extensions: 3872
Number of successful extensions: 32
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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