Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18i22
(819 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 24 1.5
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 23 2.6
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 23 2.6
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 23 2.6
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 5.9
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 5.9
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 7.8
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 7.8
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 7.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 7.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 7.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 7.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 7.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 7.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 7.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 7.8
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 7.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 7.8
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 7.8
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 7.8
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 24.2 bits (50), Expect = 1.5
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 332 TMRFLSTARRLNVVSALSDSMVPP*TVPFGFTAKNRRLINSRPGIDV 472
T R+LS RLN+ ALS S+ V F + + PG+DV
Sbjct: 29 TTRYLSVCERLNL--ALSLSLTET-QVKIWFQNRRTKWKKQNPGLDV 72
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 23.4 bits (48), Expect = 2.6
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 276 YGSKTLSDDCFMR-EIMEKNNYNTYYKMYDRKLTYVALKNDGTPRKLQISKGRKLG 112
+GS D + E KNNY + + K+ L+ +G P L + +K+G
Sbjct: 44 FGSDERRQDAILSGEYDYKNNYPSDIDQWHDKIFVTMLRYNGVPSSLNVI-SKKVG 98
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.4 bits (48), Expect = 2.6
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 276 YGSKTLSDDCFMR-EIMEKNNYNTYYKMYDRKLTYVALKNDGTPRKLQISKGRKLG 112
+GS D + E KNNY + + K+ L+ +G P L + +K+G
Sbjct: 44 FGSDERRQDAILSGEYDYKNNYPSDIDQWHDKIFVTMLRYNGVPSSLNVI-SKKVG 98
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.4 bits (48), Expect = 2.6
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 276 YGSKTLSDDCFMR-EIMEKNNYNTYYKMYDRKLTYVALKNDGTPRKLQISKGRKLG 112
+GS D + E KNNY + + K+ L+ +G P L + +K+G
Sbjct: 44 FGSDERRQDAILSGEYDYKNNYPSDIDQWHDKIFVTMLRYNGVPSSLNVI-SKKVG 98
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 22.2 bits (45), Expect = 5.9
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = -1
Query: 225 KNNYNTYYKMYDRKLTYVALKNDGTPRKLQI 133
KNN ++ K L+NDG P L +
Sbjct: 63 KNNVPIDVDRWNGKTFVTILRNDGVPSSLNV 93
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 5.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 418 KRNRLRRNH*IGQRRHHIQAPCR*QKSHR 332
K+ L+R+H + HH+Q+ Q HR
Sbjct: 134 KQETLQRHHHLQNHHHHLQSTAV-QDHHR 161
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/35 (22%), Positives = 19/35 (54%)
Frame = -1
Query: 276 YGSKTLSDDCFMREIMEKNNYNTYYKMYDRKLTYV 172
YG+ + F++ + +N + + K+ D +TY+
Sbjct: 300 YGADFPFNFAFIKNVSRDSNSSDFKKLVDNWMTYM 334
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 222 NNYNTYYKMY 193
NNYN Y K+Y
Sbjct: 101 NNYNNYKKLY 110
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 7.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 222 NNYNTYYKMY 193
NNYN Y K+Y
Sbjct: 101 NNYNNYKKLY 110
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 222 NNYNTYYKMY 193
NNYN Y K+Y
Sbjct: 101 NNYNNYKKLY 110
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 222 NNYNTYYKMY 193
NNYN Y K+Y
Sbjct: 101 NNYNNYKKLY 110
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 222 NNYNTYYKMY 193
NNYN Y K+Y
Sbjct: 101 NNYNNYKKLY 110
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 222 NNYNTYYKMY 193
NNYN Y K+Y
Sbjct: 101 NNYNNYKKLY 110
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 222 NNYNTYYKMY 193
NNYN Y K+Y
Sbjct: 101 NNYNNYKKLY 110
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 222 NNYNTYYKMY 193
NNYN Y K+Y
Sbjct: 101 NNYNNYKKLY 110
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 222 NNYNTYYKMY 193
NNYN Y K+Y
Sbjct: 99 NNYNNYKKLY 108
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 7.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 222 NNYNTYYKMY 193
NNYN Y K+Y
Sbjct: 109 NNYNNYKKLY 118
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 7.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 222 NNYNTYYKMY 193
NNYN Y K+Y
Sbjct: 344 NNYNNYKKLY 353
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 7.8
Identities = 13/81 (16%), Positives = 34/81 (41%)
Frame = -1
Query: 246 FMREIMEKNNYNTYYKMYDRKLTYVALKNDGTPRKLQISKGRKLGKFSVYAMTLLKRLSF 67
+ + + + N+N Y + ++ D P K +S + L + VYA+ + L+
Sbjct: 48 YFEQTLNELNFNLNYVNKGVTYKHTIIEMDSNPIKTALSVCKSLIERQVYAVVVSHPLTG 107
Query: 66 PIYTSCPNIKNEXYCSXIVNV 4
+ + + + Y ++ +
Sbjct: 108 DLSPAAVSYTSGFYHIPVIGI 128
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/35 (22%), Positives = 19/35 (54%)
Frame = -1
Query: 276 YGSKTLSDDCFMREIMEKNNYNTYYKMYDRKLTYV 172
YG+ + F++ + +N + + K+ D +TY+
Sbjct: 300 YGADFPFNFAFIKNVSRDSNSSDFKKLIDNWMTYM 334
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,649
Number of Sequences: 438
Number of extensions: 4858
Number of successful extensions: 41
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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