Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18i02
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 377 e-105
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 377 e-105
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 377 e-105
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 377 e-105
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 377 e-105
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 377 e-105
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 376 e-104
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 376 e-104
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 376 e-104
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 370 e-103
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 355 2e-98
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 173 2e-43
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 168 3e-42
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 9e-28
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 108 5e-24
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 97 9e-21
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 77 1e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 1e-05
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 32 0.40
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.70
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.70
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.70
Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr prote... 29 3.7
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 5.0
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 5.0
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 5.0
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 8.7
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 8.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 8.7
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 8.7
AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical ... 28 8.7
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 377 bits (927), Expect = e-105
Identities = 179/186 (96%), Positives = 183/186 (98%)
Frame = -1
Query: 783 MKILTERGXSFTTTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVIT 604
MKILTERG SFTTTAEREIVRDIKEKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 250
Query: 603 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 424
+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGI
Sbjct: 251 VGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 310
Query: 423 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 244
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 243 VHRKCF 226
VHRKCF
Sbjct: 371 VHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 377 bits (927), Expect = e-105
Identities = 179/186 (96%), Positives = 183/186 (98%)
Frame = -1
Query: 783 MKILTERGXSFTTTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVIT 604
MKILTERG SFTTTAEREIVRDIKEKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 250
Query: 603 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 424
+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGI
Sbjct: 251 VGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 310
Query: 423 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 244
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 243 VHRKCF 226
VHRKCF
Sbjct: 371 VHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 377 bits (927), Expect = e-105
Identities = 179/186 (96%), Positives = 183/186 (98%)
Frame = -1
Query: 783 MKILTERGXSFTTTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVIT 604
MKILTERG SFTTTAEREIVRDIKEKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 250
Query: 603 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 424
+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGI
Sbjct: 251 VGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 310
Query: 423 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 244
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 243 VHRKCF 226
VHRKCF
Sbjct: 371 VHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 377 bits (927), Expect = e-105
Identities = 179/186 (96%), Positives = 183/186 (98%)
Frame = -1
Query: 783 MKILTERGXSFTTTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVIT 604
MKILTERG SFTTTAEREIVRDIKEKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT
Sbjct: 147 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 206
Query: 603 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 424
+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGI
Sbjct: 207 VGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 266
Query: 423 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 244
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 267 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 326
Query: 243 VHRKCF 226
VHRKCF
Sbjct: 327 VHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 377 bits (927), Expect = e-105
Identities = 179/186 (96%), Positives = 183/186 (98%)
Frame = -1
Query: 783 MKILTERGXSFTTTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVIT 604
MKILTERG SFTTTAEREIVRDIKEKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT
Sbjct: 177 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 236
Query: 603 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 424
+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGI
Sbjct: 237 VGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 296
Query: 423 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 244
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 297 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 356
Query: 243 VHRKCF 226
VHRKCF
Sbjct: 357 VHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 377 bits (927), Expect = e-105
Identities = 179/186 (96%), Positives = 183/186 (98%)
Frame = -1
Query: 783 MKILTERGXSFTTTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVIT 604
MKILTERG SFTTTAEREIVRDIKEKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 250
Query: 603 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 424
+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGI
Sbjct: 251 VGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 310
Query: 423 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 244
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 243 VHRKCF 226
VHRKCF
Sbjct: 371 VHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 376 bits (925), Expect = e-104
Identities = 178/186 (95%), Positives = 183/186 (98%)
Frame = -1
Query: 783 MKILTERGXSFTTTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVIT 604
MKILTERG SFTTTAEREIVRDIKEKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 250
Query: 603 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 424
+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGI
Sbjct: 251 VGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 310
Query: 423 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 244
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 243 VHRKCF 226
VHRKCF
Sbjct: 371 VHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 376 bits (925), Expect = e-104
Identities = 178/186 (95%), Positives = 183/186 (98%)
Frame = -1
Query: 783 MKILTERGXSFTTTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVIT 604
MKILTERG SFTTTAEREIVRDIKEKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 250
Query: 603 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 424
+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGI
Sbjct: 251 VGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 310
Query: 423 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 244
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 243 VHRKCF 226
VHRKCF
Sbjct: 371 VHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 376 bits (925), Expect = e-104
Identities = 178/186 (95%), Positives = 183/186 (98%)
Frame = -1
Query: 783 MKILTERGXSFTTTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVIT 604
MKILTERG SFTTTAEREIVRDIKEKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 250
Query: 603 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 424
+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGI
Sbjct: 251 VGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 310
Query: 423 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 244
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 243 VHRKCF 226
VHRKCF
Sbjct: 371 VHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 370 bits (910), Expect = e-103
Identities = 177/186 (95%), Positives = 182/186 (97%)
Frame = -1
Query: 783 MKILTERGXSFTTTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVIT 604
MKILTERG SFTTTAEREIVRDIKEKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 250
Query: 603 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 424
+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGI
Sbjct: 251 VGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGI 310
Query: 423 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 244
ADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 311 ADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 369
Query: 243 VHRKCF 226
VHRKCF
Sbjct: 370 VHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 355 bits (874), Expect = 2e-98
Identities = 169/186 (90%), Positives = 175/186 (94%)
Frame = -1
Query: 783 MKILTERGXSFTTTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVIT 604
MKILTERG +FTTTAEREIVRDIKEKL YVA DFE E+A AASSSSLEKSYELPDGQVIT
Sbjct: 190 MKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVIT 249
Query: 603 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 424
IGNERFRCPE LFQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGI
Sbjct: 250 IGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGI 309
Query: 423 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 244
ADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 310 ADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 369
Query: 243 VHRKCF 226
VHRKCF
Sbjct: 370 VHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 173 bits (420), Expect = 2e-43
Identities = 85/184 (46%), Positives = 117/184 (63%)
Frame = -1
Query: 777 ILTERGXSFTTTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIG 598
+L G F + E EIVR++KE Y+ALD T ++S++ SY LPD I I
Sbjct: 196 LLRREGYEFHRSNEFEIVREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEIS 250
Query: 597 NERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 418
N FR PE LF+P +G E G+ SIMKCDVD+R+ LY+N VLSGGTT++ G D
Sbjct: 251 NSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGD 310
Query: 417 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 238
R+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H
Sbjct: 311 RLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMH 370
Query: 237 RKCF 226
++ F
Sbjct: 371 KRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 168 bits (409), Expect = 3e-42
Identities = 85/190 (44%), Positives = 118/190 (62%), Gaps = 13/190 (6%)
Frame = -1
Query: 783 MKILTERGXSFTTTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVIT 604
+K+L +RG +F +A+ E VR +KEKL Y+A D EQE A ++ L + Y LPDG+VI
Sbjct: 194 IKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIR 253
Query: 603 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 424
+G ERF PE LFQP + +E G+ E + I D+D R D Y + VLSGGTTMYPG+
Sbjct: 254 LGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGL 313
Query: 423 ADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMW 283
R++KE+ L A KI+I APP RK+ V++GG++LA+L Q W
Sbjct: 314 PSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFW 373
Query: 282 ISKQEYDESG 253
+SK+EY+E G
Sbjct: 374 VSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (290), Expect = 9e-28
Identities = 60/143 (41%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
Frame = -1
Query: 633 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 469
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 468 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLST 298
+N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 297 FQQMWISKQEYDESGPSIVHRKC 229
FQQMW+SK EYDESG SIV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 108 bits (259), Expect = 5e-24
Identities = 54/166 (32%), Positives = 97/166 (58%), Gaps = 3/166 (1%)
Frame = -1
Query: 756 SFTTTAEREIVRDIKEKLXYVALDFEQEMATAASSS--SLEKSYELPDGQV-ITIGNERF 586
+F + E+ I+R E+ YV D+++E + + SL+ P Q I N RF
Sbjct: 374 AFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRF 433
Query: 585 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 406
C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGIA+++++
Sbjct: 434 LCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQ 493
Query: 405 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 268
E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 494 ELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 97.5 bits (232), Expect = 9e-21
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 23/201 (11%)
Frame = -1
Query: 777 ILTERGXSFTTTAEREIVRDIKEKLXYVALDFEQEMATA-ASSSSLEKSYELPDGQV--- 610
+L +R + E+ + IKEK YV D +E ++ ++Y+ +
Sbjct: 214 LLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEFVKYDTDAAKWLRTYDGINSITKKP 273
Query: 609 --ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 439
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+T
Sbjct: 274 FNVDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGST 333
Query: 438 MYPGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILAS 307
M+ A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS
Sbjct: 334 MFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLAS 393
Query: 306 LSTFQQMWISKQEYDESGPSI 244
S F Q+ +K EY E GPSI
Sbjct: 394 TSEFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 77.0 bits (181), Expect = 1e-14
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 25/198 (12%)
Frame = -1
Query: 738 EREIVRDIKEKLXYVALDFEQEMATAAS---SSSLEKSYELPD------GQV-------- 610
E ++ + KE L +V+ +F++ M A + ++ K Y +PD G V
Sbjct: 198 ETYVINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHD 257
Query: 609 -----ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 445
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG
Sbjct: 258 PQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGG 317
Query: 444 TTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISK 274
++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI++
Sbjct: 318 SSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINR 373
Query: 273 QEYDESGPSIVHRKCF*T 220
+++DE G S+ F T
Sbjct: 374 KDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 77.0 bits (181), Expect = 1e-14
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 25/198 (12%)
Frame = -1
Query: 738 EREIVRDIKEKLXYVALDFEQEMATAAS---SSSLEKSYELPD------GQV-------- 610
E ++ + KE L +V+ +F++ M A + ++ K Y +PD G V
Sbjct: 198 ETYVINECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHD 257
Query: 609 -----ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 445
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG
Sbjct: 258 PQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGG 317
Query: 444 TTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISK 274
++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI++
Sbjct: 318 SSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINR 373
Query: 273 QEYDESGPSIVHRKCF*T 220
+++DE G S+ F T
Sbjct: 374 KDWDERGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -1
Query: 507 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 343
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 342 ----YSVWIGGSILASL-STFQQMWISKQEY 265
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 32.3 bits (70), Expect = 0.40
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +1
Query: 478 LTDVHVALHDGVICGLVDAASFHTQERGLEESLWATESFVSDSDDLTVGKFVRLLEGAAG 657
+T +H A V+ G +DA + + R E + + D+LTV + +RL+ G
Sbjct: 497 ITGMHQATEGKVMIGGIDANANRAEAR---ELIGYCPQYNPIYDELTVWEHLRLVNALKG 553
Query: 658 CSGG-HFLLEVKSDVXQL-LLDVTNDFP--LGGGSER 756
SGG F ++ +S + Q+ L D N L GG +R
Sbjct: 554 RSGGSDFKMDAESLLKQIELTDKRNTLAKNLSGGMKR 590
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 331 PYGVLPLWRSNDLNLHCRWGESCD 402
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 331 PYGVLPLWRSNDLNLHCRWGESCD 402
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 331 PYGVLPLWRSNDLNLHCRWGESCD 402
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical
protein C41C4.4 protein.
Length = 967
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 643 REVLRTSRRSGHHYRK--RKIPLPRGSLPTLVLGYGSLRHPR 524
R++LR R HHYR+ + G +P L Y + R PR
Sbjct: 844 RDLLRAMRNKKHHYRELPEDVRQSLGDIPDQFLHYFTSRFPR 885
>AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr protein
kinase protein.
Length = 967
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 643 REVLRTSRRSGHHYRK--RKIPLPRGSLPTLVLGYGSLRHPR 524
R++LR R HHYR+ + G +P L Y + R PR
Sbjct: 844 RDLLRAMRNKKHHYRELPEDVRQSLGDIPDQFLHYFTSRFPR 885
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 601 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 488
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 601 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 488
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 601 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 488
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 601 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 488
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 601 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 488
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 167 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 259
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 270 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 169
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 167 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 259
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 351 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 190
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
>AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical
protein Y57A10B.1 protein.
Length = 470
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 574 LWATESFVSDSDDLTVGKFVRLLEGAAGCSGG 669
L++T SFVS + T + + + G +GC GG
Sbjct: 7 LFSTASFVSPATTSTTTRCMEQVGGGSGCGGG 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,460,820
Number of Sequences: 27780
Number of extensions: 379175
Number of successful extensions: 1143
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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