Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18h21
(824 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118783-1|AAM50643.1| 993|Drosophila melanogaster GH13756p pro... 260 2e-69
AF145632-1|AAD38607.1| 1225|Drosophila melanogaster BcDNA.GH0603... 260 2e-69
AE014134-2033|AAF53072.1| 1225|Drosophila melanogaster CG6230-PA... 260 2e-69
BT012457-1|AAS93728.1| 246|Drosophila melanogaster RE51991p pro... 31 1.9
AY052043-1|AAK93467.1| 704|Drosophila melanogaster LP05645p pro... 31 1.9
AE014297-3706|AAN14038.1| 244|Drosophila melanogaster CG7662-PB... 31 1.9
AE014296-1542|AAN11975.1| 704|Drosophila melanogaster CG5735-PD... 31 1.9
AE014296-1541|AAF50351.1| 704|Drosophila melanogaster CG5735-PC... 31 1.9
AE014296-1540|AAF50350.1| 704|Drosophila melanogaster CG5735-PB... 31 1.9
AE014296-1543|AAF50352.1| 551|Drosophila melanogaster CG5735-PA... 31 2.5
>AY118783-1|AAM50643.1| 993|Drosophila melanogaster GH13756p protein.
Length = 993
Score = 260 bits (637), Expect = 2e-69
Identities = 120/216 (55%), Positives = 165/216 (76%)
Frame = -3
Query: 807 LALNALILAYSQSVLYLDGIKFSDTQATLQSLLLASCFLFISRSKPLKQLSKERPLPNIF 628
LALNALI AY QSVLY+DGIKFSDTQAT+Q + +A+CFLFI+R+KPLK LSK PLPNIF
Sbjct: 770 LALNALIQAYCQSVLYIDGIKFSDTQATMQGIFIAACFLFITRAKPLKTLSKVAPLPNIF 829
Query: 627 NMYTIMTVLSQFAVHFLCLIYLVHEATVRSPGRDNKPKLDMDLAEDEDREFAPDLLNSTV 448
N YTI T+LSQFAVHF L YL +A + +P R+ K KL +D+ +E ++ P++++STV
Sbjct: 830 NFYTISTILSQFAVHFGTLYYLTSQANILAPPREGKVKLYIDMDAEEKTKYDPNIVSSTV 889
Query: 447 YIISMALQISTFAINYRGEPFMQGLKDNKPLLYSIVISGGAVLALAAGIFPDLSNMFEIV 268
YII ++LQ++T A+NY+G PFM+ L+ N+ L+Y+I S V+ L+ G+ P+L+ FEI+
Sbjct: 890 YIICLSLQVATIAVNYKGYPFMESLRSNRMLMYAIGASAALVILLSTGLAPELTEFFEII 949
Query: 267 YFPPDYRVILVQVLIADMLFAYLVDRFCLFLFGEGR 160
FP D+R L+ VL+ D++ A+L+DR C FLFGE R
Sbjct: 950 DFPTDFRKTLLGVLVLDIVGAFLLDRICSFLFGETR 985
>AF145632-1|AAD38607.1| 1225|Drosophila melanogaster BcDNA.GH06032
protein.
Length = 1225
Score = 260 bits (637), Expect = 2e-69
Identities = 120/216 (55%), Positives = 165/216 (76%)
Frame = -3
Query: 807 LALNALILAYSQSVLYLDGIKFSDTQATLQSLLLASCFLFISRSKPLKQLSKERPLPNIF 628
LALNALI AY QSVLY+DGIKFSDTQAT+Q + +A+CFLFI+R+KPLK LSK PLPNIF
Sbjct: 1002 LALNALIQAYCQSVLYIDGIKFSDTQATMQGIFIAACFLFITRAKPLKTLSKVAPLPNIF 1061
Query: 627 NMYTIMTVLSQFAVHFLCLIYLVHEATVRSPGRDNKPKLDMDLAEDEDREFAPDLLNSTV 448
N YTI T+LSQFAVHF L YL +A + +P R+ K KL +D+ +E ++ P++++STV
Sbjct: 1062 NFYTISTILSQFAVHFGTLYYLTSQANILAPPREGKVKLYIDMDAEEKTKYDPNIVSSTV 1121
Query: 447 YIISMALQISTFAINYRGEPFMQGLKDNKPLLYSIVISGGAVLALAAGIFPDLSNMFEIV 268
YII ++LQ++T A+NY+G PFM+ L+ N+ L+Y+I S V+ L+ G+ P+L+ FEI+
Sbjct: 1122 YIICLSLQVATIAVNYKGYPFMESLRSNRMLMYAIGASAALVILLSTGLAPELTEFFEII 1181
Query: 267 YFPPDYRVILVQVLIADMLFAYLVDRFCLFLFGEGR 160
FP D+R L+ VL+ D++ A+L+DR C FLFGE R
Sbjct: 1182 DFPTDFRKTLLGVLVLDIVGAFLLDRICSFLFGETR 1217
>AE014134-2033|AAF53072.1| 1225|Drosophila melanogaster CG6230-PA
protein.
Length = 1225
Score = 260 bits (637), Expect = 2e-69
Identities = 120/216 (55%), Positives = 165/216 (76%)
Frame = -3
Query: 807 LALNALILAYSQSVLYLDGIKFSDTQATLQSLLLASCFLFISRSKPLKQLSKERPLPNIF 628
LALNALI AY QSVLY+DGIKFSDTQAT+Q + +A+CFLFI+R+KPLK LSK PLPNIF
Sbjct: 1002 LALNALIQAYCQSVLYIDGIKFSDTQATMQGIFIAACFLFITRAKPLKTLSKVAPLPNIF 1061
Query: 627 NMYTIMTVLSQFAVHFLCLIYLVHEATVRSPGRDNKPKLDMDLAEDEDREFAPDLLNSTV 448
N YTI T+LSQFAVHF L YL +A + +P R+ K KL +D+ +E ++ P++++STV
Sbjct: 1062 NFYTISTILSQFAVHFGTLYYLTSQANILAPPREGKVKLYIDMDAEEKTKYDPNIVSSTV 1121
Query: 447 YIISMALQISTFAINYRGEPFMQGLKDNKPLLYSIVISGGAVLALAAGIFPDLSNMFEIV 268
YII ++LQ++T A+NY+G PFM+ L+ N+ L+Y+I S V+ L+ G+ P+L+ FEI+
Sbjct: 1122 YIICLSLQVATIAVNYKGYPFMESLRSNRMLMYAIGASAALVILLSTGLAPELTEFFEII 1181
Query: 267 YFPPDYRVILVQVLIADMLFAYLVDRFCLFLFGEGR 160
FP D+R L+ VL+ D++ A+L+DR C FLFGE R
Sbjct: 1182 DFPTDFRKTLLGVLVLDIVGAFLLDRICSFLFGETR 1217
>BT012457-1|AAS93728.1| 246|Drosophila melanogaster RE51991p
protein.
Length = 246
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 477 FAPDLLNSTVYIISMALQISTFAINYRGEPFMQGLKDNKPLLYSIVISGG 328
+ P + S +++I AL I F + G M G + N P+ S +I GG
Sbjct: 128 YRPRIYVSIIHLILKALSIFNFCFSGLGFNAMGGKEQNSPIYISRIIPGG 177
>AY052043-1|AAK93467.1| 704|Drosophila melanogaster LP05645p
protein.
Length = 704
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 124 SKGRVS*LRLRNPPFPEEEQTETVHQIREQHIRYQNLHEYH----PIIRWEVYYFEHVGE 291
S G + L L PP ++Q + HQ +QH + Q LH++ P + ++ + +
Sbjct: 162 SCGGLPNLNLNKPPQLHQQQHQQQHQQHQQHQQQQQLHQHQQQLSPNLSALHHHHQQQQQ 221
Query: 292 VREYPGCKSKHRP 330
+RE G S P
Sbjct: 222 LRESGGSHSPSSP 234
>AE014297-3706|AAN14038.1| 244|Drosophila melanogaster CG7662-PB,
isoform B protein.
Length = 244
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 477 FAPDLLNSTVYIISMALQISTFAINYRGEPFMQGLKDNKPLLYSIVISGG 328
+ P + S +++I AL I F + G M G + N P+ S +I GG
Sbjct: 128 YRPRIYVSIIHLIWKALSIFNFCFSGLGFNVMGGKEQNSPIYISRIIPGG 177
>AE014296-1542|AAN11975.1| 704|Drosophila melanogaster CG5735-PD,
isoform D protein.
Length = 704
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 124 SKGRVS*LRLRNPPFPEEEQTETVHQIREQHIRYQNLHEYH----PIIRWEVYYFEHVGE 291
S G + L L PP ++Q + HQ +QH + Q LH++ P + ++ + +
Sbjct: 162 SCGGLPNLNLNKPPQLHQQQHQQQHQQHQQHQQQQQLHQHQQQLSPNLSALHHHHQQQQQ 221
Query: 292 VREYPGCKSKHRP 330
+RE G S P
Sbjct: 222 LRESGGSHSPSSP 234
>AE014296-1541|AAF50351.1| 704|Drosophila melanogaster CG5735-PC,
isoform C protein.
Length = 704
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 124 SKGRVS*LRLRNPPFPEEEQTETVHQIREQHIRYQNLHEYH----PIIRWEVYYFEHVGE 291
S G + L L PP ++Q + HQ +QH + Q LH++ P + ++ + +
Sbjct: 162 SCGGLPNLNLNKPPQLHQQQHQQQHQQHQQHQQQQQLHQHQQQLSPNLSALHHHHQQQQQ 221
Query: 292 VREYPGCKSKHRP 330
+RE G S P
Sbjct: 222 LRESGGSHSPSSP 234
>AE014296-1540|AAF50350.1| 704|Drosophila melanogaster CG5735-PB,
isoform B protein.
Length = 704
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 124 SKGRVS*LRLRNPPFPEEEQTETVHQIREQHIRYQNLHEYH----PIIRWEVYYFEHVGE 291
S G + L L PP ++Q + HQ +QH + Q LH++ P + ++ + +
Sbjct: 162 SCGGLPNLNLNKPPQLHQQQHQQQHQQHQQHQQQQQLHQHQQQLSPNLSALHHHHQQQQQ 221
Query: 292 VREYPGCKSKHRP 330
+RE G S P
Sbjct: 222 LRESGGSHSPSSP 234
>AE014296-1543|AAF50352.1| 551|Drosophila melanogaster CG5735-PA,
isoform A protein.
Length = 551
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +1
Query: 145 LRLRNPPFPEEEQTETVHQIREQHIRYQNLHEYH----PIIRWEVYYFEHVGEVREYPGC 312
L L PP ++Q + HQ +QH + Q LH++ P + ++ + ++RE G
Sbjct: 16 LNLNKPPQLHQQQHQQQHQQHQQHQQQQQLHQHQQQLSPNLSALHHHHQQQQQLRESGGS 75
Query: 313 KSKHRP 330
S P
Sbjct: 76 HSPSSP 81
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,153,082
Number of Sequences: 53049
Number of extensions: 826330
Number of successful extensions: 2281
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2279
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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