Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18h15
(407 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY226549-1|AAO47375.1| 306|Drosophila melanogaster pickpocket 2... 33 0.19
AE014297-4404|AAF56909.3| 550|Drosophila melanogaster CG12048-P... 33 0.19
BT001591-1|AAN71346.1| 760|Drosophila melanogaster RE27138p pro... 29 3.1
AY071846-1|AAL60055.1| 760|Drosophila melanogaster hepatocyte g... 29 3.1
AY051789-1|AAK93213.1| 760|Drosophila melanogaster LD30575p pro... 29 3.1
AE014134-454|AAF51222.1| 647|Drosophila melanogaster CG2903-PA,... 29 3.1
AE014134-453|AAN10412.2| 760|Drosophila melanogaster CG2903-PC,... 29 3.1
AE014134-452|AAF51221.2| 760|Drosophila melanogaster CG2903-PB,... 29 3.1
AE014297-2569|AAX52965.1| 94|Drosophila melanogaster CG14300-P... 28 5.4
AY089572-1|AAL90310.1| 297|Drosophila melanogaster RE09177p pro... 27 9.5
AE014296-434|AAF47629.2| 297|Drosophila melanogaster CG13806-PA... 27 9.5
>AY226549-1|AAO47375.1| 306|Drosophila melanogaster pickpocket 21
protein.
Length = 306
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 210 SNINTNKALTDFLRPLCETDQTRKTYAVPWNCNNIFH-CNYYNVPLFVVNCPENTAYSYV 386
SN NK LTD L L D + + C ++FH C + P VNC E Y +
Sbjct: 134 SNFFGNKTLTDELHMLDHLDLREVYKFIQFRCQDLFHTCRWRGNP---VNCCEVIEYQFT 190
Query: 387 SDG 395
G
Sbjct: 191 EAG 193
>AE014297-4404|AAF56909.3| 550|Drosophila melanogaster CG12048-PA
protein.
Length = 550
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 210 SNINTNKALTDFLRPLCETDQTRKTYAVPWNCNNIFH-CNYYNVPLFVVNCPENTAYSYV 386
SN NK LTD L L D + + C ++FH C + P VNC E Y +
Sbjct: 177 SNFFGNKTLTDELHMLDHLDLREVYKFIQFRCQDLFHTCRWRGNP---VNCCEVIEYQFT 233
Query: 387 SDG 395
G
Sbjct: 234 EAG 236
>BT001591-1|AAN71346.1| 760|Drosophila melanogaster RE27138p
protein.
Length = 760
Score = 28.7 bits (61), Expect = 3.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 342 KEHCNNCNEIYCYNSTAQR 286
K HC NC +++C TA++
Sbjct: 177 KHHCRNCGQVFCGQCTAKQ 195
>AY071846-1|AAL60055.1| 760|Drosophila melanogaster hepatocyte
growth factor-regulatedtyrosine kinase substrate
protein.
Length = 760
Score = 28.7 bits (61), Expect = 3.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 342 KEHCNNCNEIYCYNSTAQR 286
K HC NC +++C TA++
Sbjct: 177 KHHCRNCGQVFCGQCTAKQ 195
>AY051789-1|AAK93213.1| 760|Drosophila melanogaster LD30575p
protein.
Length = 760
Score = 28.7 bits (61), Expect = 3.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 342 KEHCNNCNEIYCYNSTAQR 286
K HC NC +++C TA++
Sbjct: 177 KHHCRNCGQVFCGQCTAKQ 195
>AE014134-454|AAF51222.1| 647|Drosophila melanogaster CG2903-PA,
isoform A protein.
Length = 647
Score = 28.7 bits (61), Expect = 3.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 342 KEHCNNCNEIYCYNSTAQR 286
K HC NC +++C TA++
Sbjct: 64 KHHCRNCGQVFCGQCTAKQ 82
>AE014134-453|AAN10412.2| 760|Drosophila melanogaster CG2903-PC,
isoform C protein.
Length = 760
Score = 28.7 bits (61), Expect = 3.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 342 KEHCNNCNEIYCYNSTAQR 286
K HC NC +++C TA++
Sbjct: 177 KHHCRNCGQVFCGQCTAKQ 195
>AE014134-452|AAF51221.2| 760|Drosophila melanogaster CG2903-PB,
isoform B protein.
Length = 760
Score = 28.7 bits (61), Expect = 3.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 342 KEHCNNCNEIYCYNSTAQR 286
K HC NC +++C TA++
Sbjct: 177 KHHCRNCGQVFCGQCTAKQ 195
>AE014297-2569|AAX52965.1| 94|Drosophila melanogaster CG14300-PA
protein.
Length = 94
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 249 RPLCETD-QTRKTYAVPWNCNNIFHCNYYNVPLFVVNCPENTAYSYVSDGCI 401
R C+ + + +TY ++ + C VP V+CP AY ++ CI
Sbjct: 26 RSACKDESEIGQTYTHHFDAAKYWLCETLGVPATEVDCPAGLAYMHLLKECI 77
>AY089572-1|AAL90310.1| 297|Drosophila melanogaster RE09177p
protein.
Length = 297
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 300 NCNNIFHCNYYNVPLFVVNCPENTAYSYVSDGCIL 404
+C ++C+ N L ++CP T Y C+L
Sbjct: 260 DCRKYYYCSALNGTLRHMDCPNGTYYRPELSSCVL 294
>AE014296-434|AAF47629.2| 297|Drosophila melanogaster CG13806-PA
protein.
Length = 297
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 300 NCNNIFHCNYYNVPLFVVNCPENTAYSYVSDGCIL 404
+C ++C+ N L ++CP T Y C+L
Sbjct: 260 DCRKYYYCSALNGTLRHMDCPNGTYYRPELSSCVL 294
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,648,513
Number of Sequences: 53049
Number of extensions: 203037
Number of successful extensions: 510
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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