Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18h07
(727 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 336 1e-92
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 336 1e-92
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 336 1e-92
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 336 1e-92
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 336 1e-92
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 336 1e-92
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 290 1e-78
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 290 1e-78
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 179 1e-47
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 179 1e-47
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 64 2e-13
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 64 2e-13
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 62 7e-13
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 62 7e-13
AY075483-1|AAL68293.1| 313|Drosophila melanogaster RE39480p pro... 31 2.1
AE013599-905|AAF58912.1| 313|Drosophila melanogaster CG12926-PA... 31 2.1
BT025110-1|ABE73281.1| 320|Drosophila melanogaster IP10506p pro... 29 6.4
BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p pro... 29 6.4
AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-P... 29 6.4
AE014298-1708|AAF48109.2| 320|Drosophila melanogaster CG10352-P... 29 6.4
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 336 bits (827), Expect = 1e-92
Identities = 163/223 (73%), Positives = 183/223 (82%)
Frame = -1
Query: 727 PATGCQKLXEVVDEHKLXIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 548
PATGCQKL EVVDEHKL +FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGV
Sbjct: 8 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGV 67
Query: 547 LTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDG 368
LT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD
Sbjct: 68 LTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDT 127
Query: 367 NVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTPV 188
+PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKIQRL+TPV
Sbjct: 128 TIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQRLITPV 184
Query: 187 VLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 59
VLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 185 VLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 336 bits (827), Expect = 1e-92
Identities = 163/223 (73%), Positives = 183/223 (82%)
Frame = -1
Query: 727 PATGCQKLXEVVDEHKLXIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 548
PATGCQKL EVVDEHKL +FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGV
Sbjct: 8 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGV 67
Query: 547 LTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDG 368
LT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD
Sbjct: 68 LTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDT 127
Query: 367 NVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTPV 188
+PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKIQRL+TPV
Sbjct: 128 TIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQRLITPV 184
Query: 187 VLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 59
VLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 185 VLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 336 bits (827), Expect = 1e-92
Identities = 163/223 (73%), Positives = 183/223 (82%)
Frame = -1
Query: 727 PATGCQKLXEVVDEHKLXIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 548
PATGCQKL EVVDEHKL +FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGV
Sbjct: 8 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGV 67
Query: 547 LTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDG 368
LT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD
Sbjct: 68 LTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDT 127
Query: 367 NVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTPV 188
+PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKIQRL+TPV
Sbjct: 128 TIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQRLITPV 184
Query: 187 VLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 59
VLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 185 VLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 336 bits (827), Expect = 1e-92
Identities = 163/223 (73%), Positives = 183/223 (82%)
Frame = -1
Query: 727 PATGCQKLXEVVDEHKLXIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 548
PATGCQKL EVVDEHKL +FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGV
Sbjct: 8 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGV 67
Query: 547 LTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDG 368
LT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD
Sbjct: 68 LTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDT 127
Query: 367 NVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTPV 188
+PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKIQRL+TPV
Sbjct: 128 TIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQRLITPV 184
Query: 187 VLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 59
VLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 185 VLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 336 bits (827), Expect = 1e-92
Identities = 163/223 (73%), Positives = 183/223 (82%)
Frame = -1
Query: 727 PATGCQKLXEVVDEHKLXIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 548
PATGCQKL EVVDEHKL +FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGV
Sbjct: 11 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGV 70
Query: 547 LTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDG 368
LT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD
Sbjct: 71 LTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDT 130
Query: 367 NVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTPV 188
+PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKIQRL+TPV
Sbjct: 131 TIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQRLITPV 187
Query: 187 VLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 59
VLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 188 VLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 230
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 336 bits (827), Expect = 1e-92
Identities = 163/223 (73%), Positives = 183/223 (82%)
Frame = -1
Query: 727 PATGCQKLXEVVDEHKLXIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 548
PATGCQKL EVVDEHKL +FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGV
Sbjct: 8 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGV 67
Query: 547 LTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDG 368
LT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD
Sbjct: 68 LTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDT 127
Query: 367 NVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTPV 188
+PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKIQRL+TPV
Sbjct: 128 TIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQRLITPV 184
Query: 187 VLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 59
VLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 185 VLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 290 bits (712), Expect = 1e-78
Identities = 142/199 (71%), Positives = 161/199 (80%)
Frame = -1
Query: 655 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 476
MG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 475 RKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKED 296
RKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NLSKED
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKED 120
Query: 295 DVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEA 116
DVRR+VV+R LPA K+N K KAPKIQRL+TPVVLQ K + A
Sbjct: 121 DVRRFVVRRPLPA---KDNKKATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASA 177
Query: 115 EYAKLLAQRKKESKVRRQE 59
+YAKLL QRKKESK +R+E
Sbjct: 178 DYAKLLVQRKKESKAKREE 196
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 290 bits (712), Expect = 1e-78
Identities = 142/199 (71%), Positives = 161/199 (80%)
Frame = -1
Query: 655 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 476
MG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 475 RKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKED 296
RKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NLSKED
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKED 120
Query: 295 DVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEA 116
DVRR+VV+R LPA K+N K KAPKIQRL+TPVVLQ K + A
Sbjct: 121 DVRRFVVRRPLPA---KDNKKATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASA 177
Query: 115 EYAKLLAQRKKESKVRRQE 59
+YAKLL QRKKESK +R+E
Sbjct: 178 DYAKLLVQRKKESKAKREE 196
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 179 bits (436), Expect(2) = 1e-47
Identities = 97/172 (56%), Positives = 116/172 (67%)
Frame = -1
Query: 727 PATGCQKLXEVVDEHKLXIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 548
PATGCQKL EVVDEHKL +FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGV
Sbjct: 8 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGV 67
Query: 547 LTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDG 368
LT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 68 LTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS-------- 118
Query: 367 NVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 212
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 119 --PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 161
Score = 29.9 bits (64), Expect(2) = 1e-47
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 118 AEYAKLLAQRKKESKVRR 65
AEY KLL +RKKESK R
Sbjct: 165 AEYVKLLVKRKKESKANR 182
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 179 bits (436), Expect(2) = 1e-47
Identities = 97/172 (56%), Positives = 116/172 (67%)
Frame = -1
Query: 727 PATGCQKLXEVVDEHKLXIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 548
PATGCQKL EVVDEHKL +FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGV
Sbjct: 8 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGV 67
Query: 547 LTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDG 368
LT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 68 LTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS-------- 118
Query: 367 NVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 212
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 119 --PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 161
Score = 29.9 bits (64), Expect(2) = 1e-47
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 118 AEYAKLLAQRKKESKVRR 65
AEY KLL +RKKESK R
Sbjct: 165 AEYVKLLVKRKKESKANR 182
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 64.5 bits (150), Expect(2) = 2e-13
Identities = 44/110 (40%), Positives = 60/110 (54%)
Frame = -1
Query: 541 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNV 362
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53
Query: 361 PRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 212
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 54 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 96
Score = 29.9 bits (64), Expect(2) = 2e-13
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 118 AEYAKLLAQRKKESKVRR 65
AEY KLL +RKKESK R
Sbjct: 100 AEYVKLLVKRKKESKANR 117
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 64.5 bits (150), Expect(2) = 2e-13
Identities = 44/110 (40%), Positives = 60/110 (54%)
Frame = -1
Query: 541 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNV 362
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53
Query: 361 PRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 212
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 54 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 96
Score = 29.9 bits (64), Expect(2) = 2e-13
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 118 AEYAKLLAQRKKESKVRR 65
AEY KLL +RKKESK R
Sbjct: 100 AEYVKLLVKRKKESKANR 117
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 62.5 bits (145), Expect(2) = 7e-13
Identities = 43/108 (39%), Positives = 59/108 (54%)
Frame = -1
Query: 535 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 356
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 21 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 69
Query: 355 RLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 212
RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 70 RLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 110
Score = 29.9 bits (64), Expect(2) = 7e-13
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 118 AEYAKLLAQRKKESKVRR 65
AEY KLL +RKKESK R
Sbjct: 114 AEYVKLLVKRKKESKANR 131
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 62.5 bits (145), Expect(2) = 7e-13
Identities = 43/108 (39%), Positives = 59/108 (54%)
Frame = -1
Query: 535 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 356
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 355 RLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 212
RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 68 RLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 108
Score = 29.9 bits (64), Expect(2) = 7e-13
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 118 AEYAKLLAQRKKESKVRR 65
AEY KLL +RKKESK R
Sbjct: 112 AEYVKLLVKRKKESKANR 129
>AY075483-1|AAL68293.1| 313|Drosophila melanogaster RE39480p
protein.
Length = 313
Score = 30.7 bits (66), Expect = 2.1
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -1
Query: 337 ASKIRKLFNL-SKEDDVRRYVVKRVLPAKEGKEN 239
+ KIRK F++ SK D + +YV K LPA+ G N
Sbjct: 223 SEKIRKRFHIHSKLDSLYKYVPKECLPAEYGGSN 256
>AE013599-905|AAF58912.1| 313|Drosophila melanogaster CG12926-PA
protein.
Length = 313
Score = 30.7 bits (66), Expect = 2.1
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -1
Query: 337 ASKIRKLFNL-SKEDDVRRYVVKRVLPAKEGKEN 239
+ KIRK F++ SK D + +YV K LPA+ G N
Sbjct: 223 SEKIRKRFHIHSKLDSLYKYVPKECLPAEYGGSN 256
>BT025110-1|ABE73281.1| 320|Drosophila melanogaster IP10506p
protein.
Length = 320
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 375 VNPGISWAPLRTITRAKTERLASTIHPRTDLRFLS 479
V PG+ W PLR E LA H D+ F++
Sbjct: 33 VPPGVVWYPLRDFIPGSAEALAHLAHLGKDVTFVT 67
>BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p
protein.
Length = 638
Score = 29.1 bits (62), Expect = 6.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 493 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGP 344
P ER R + R I+ ++ A+V+V G +E DG RRL P
Sbjct: 271 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 321
>AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-PA
protein.
Length = 681
Score = 29.1 bits (62), Expect = 6.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 493 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGP 344
P ER R + R I+ ++ A+V+V G +E DG RRL P
Sbjct: 314 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 364
>AE014298-1708|AAF48109.2| 320|Drosophila melanogaster CG10352-PA
protein.
Length = 320
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 375 VNPGISWAPLRTITRAKTERLASTIHPRTDLRFLS 479
V PG+ W PLR E LA H D+ F++
Sbjct: 33 VPPGVVWYPLRDFIPGSAEALAHLAHLGKDVTFVT 67
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,405,223
Number of Sequences: 53049
Number of extensions: 687293
Number of successful extensions: 2007
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1983
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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