Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18g22
(312 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-2108|AAF48428.1| 93|Drosophila melanogaster CG9091-PA... 146 5e-36
AE013599-3544|AAF46957.1| 89|Drosophila melanogaster CG9873-PA... 129 6e-31
BT023213-1|AAY55629.1| 89|Drosophila melanogaster IP02962p pro... 125 1e-29
BT023224-1|AAY55640.1| 103|Drosophila melanogaster IP02862p pro... 75 1e-14
BT023192-1|AAY55608.1| 78|Drosophila melanogaster IP03162p pro... 61 3e-10
AY070652-1|AAL48123.1| 357|Drosophila melanogaster RH03777p pro... 30 0.52
AY070651-1|AAL48122.1| 357|Drosophila melanogaster RH03711p pro... 30 0.52
AE014296-2144|AAF49916.1| 733|Drosophila melanogaster CG10663-P... 30 0.69
DQ138896-1|ABA86502.1| 1309|Drosophila melanogaster CG18265 prot... 27 6.5
BT011387-1|AAR96179.1| 1322|Drosophila melanogaster GH10077p pro... 27 6.5
AY061630-1|AAL29178.1| 680|Drosophila melanogaster SD10769p pro... 27 6.5
AE014296-2912|AAF49339.1| 1322|Drosophila melanogaster CG18265-P... 27 6.5
AE013599-2895|AAF57554.1| 680|Drosophila melanogaster CG7744-PA... 27 6.5
>AE014298-2108|AAF48428.1| 93|Drosophila melanogaster CG9091-PA
protein.
Length = 93
Score = 146 bits (354), Expect = 5e-36
Identities = 66/81 (81%), Positives = 70/81 (86%)
Frame = -1
Query: 279 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 100
MTKGTSSFGKR NKTHTLCRRCGRSSYHIQKS CAQCGYPAAKLRSY+WSVKA
Sbjct: 1 MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWSVKAKRRKTTG 60
Query: 99 XXRMRHLKIVRRRFRNGFKEG 37
RM+HLK+VRRRFRNGF+EG
Sbjct: 61 TGRMQHLKVVRRRFRNGFREG 81
>AE013599-3544|AAF46957.1| 89|Drosophila melanogaster CG9873-PA
protein.
Length = 89
Score = 129 bits (312), Expect = 6e-31
Identities = 57/81 (70%), Positives = 66/81 (81%)
Frame = -1
Query: 279 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 100
MTKGT+SFGKR NKTHT+CRRCG SSYH+QKSKC+QCGYPAAK RS++WS KA
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQCGYPAAKTRSFNWSRKAKGRKAQG 60
Query: 99 XXRMRHLKIVRRRFRNGFKEG 37
RMR+LK +RRRFRNG +EG
Sbjct: 61 TGRMRYLKNLRRRFRNGLREG 81
>BT023213-1|AAY55629.1| 89|Drosophila melanogaster IP02962p
protein.
Length = 89
Score = 125 bits (302), Expect = 1e-29
Identities = 56/81 (69%), Positives = 65/81 (80%)
Frame = -1
Query: 279 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 100
MTKGT+SFGKR NKTHT+CRRCG SSYH+QKSKC+Q GYPAAK RS++WS KA
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQSGYPAAKTRSFNWSRKAKGRKAQG 60
Query: 99 XXRMRHLKIVRRRFRNGFKEG 37
RMR+LK +RRRFRNG +EG
Sbjct: 61 TGRMRYLKNLRRRFRNGLREG 81
>BT023224-1|AAY55640.1| 103|Drosophila melanogaster IP02862p
protein.
Length = 103
Score = 75.4 bits (177), Expect = 1e-14
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = -1
Query: 279 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQ 172
MTKGT+SFGKR NKTHT+CRRCG SSYH+QKSKC+Q
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQ 36
>BT023192-1|AAY55608.1| 78|Drosophila melanogaster IP03162p
protein.
Length = 78
Score = 60.9 bits (141), Expect = 3e-10
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = -1
Query: 279 MTKGTSSFGKRRNKTHTLCRRCGRSSYH 196
MTKGT+SFGKR NKTHT+CRRCG SSYH
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYH 28
>AY070652-1|AAL48123.1| 357|Drosophila melanogaster RH03777p
protein.
Length = 357
Score = 30.3 bits (65), Expect = 0.52
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = -2
Query: 230 RYAEDVVDRHITFKNQNAPNVDILQQNYDPTTGQ*RLSAGRLL-ELAACVI*RLSGGASV 54
RY + D + P+ D YDP TG+ G + L + L GG+ +
Sbjct: 128 RYVKSRDDEQLLGHLSQTPSTDCAPFAYDPDTGKPIAPCGAIANSLFNDTLTLLQGGSEI 187
Query: 53 MVLKKGKPTPPKKACSF 3
+LK G P K F
Sbjct: 188 KLLKTGIAWPSDKRVKF 204
>AY070651-1|AAL48122.1| 357|Drosophila melanogaster RH03711p
protein.
Length = 357
Score = 30.3 bits (65), Expect = 0.52
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = -2
Query: 230 RYAEDVVDRHITFKNQNAPNVDILQQNYDPTTGQ*RLSAGRLL-ELAACVI*RLSGGASV 54
RY + D + P+ D YDP TG+ G + L + L GG+ +
Sbjct: 128 RYVKSRDDEQLLGHLSQTPSTDCAPFAYDPDTGKPIAPCGAIANSLFNDTLTLLQGGSEI 187
Query: 53 MVLKKGKPTPPKKACSF 3
+LK G P K F
Sbjct: 188 KLLKTGIAWPSDKRVKF 204
>AE014296-2144|AAF49916.1| 733|Drosophila melanogaster CG10663-PA
protein.
Length = 733
Score = 29.9 bits (64), Expect = 0.69
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = -1
Query: 252 KRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLR 145
+RR + + R+CG + H+++SKC+ C +PA ++
Sbjct: 64 RRRERFCKVKRKCGHTK-HVEQSKCSHC-HPAPAIK 97
>DQ138896-1|ABA86502.1| 1309|Drosophila melanogaster CG18265
protein.
Length = 1309
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 291 KSDKMTKGTSSFGKRRNKTHTLCRRCGRS 205
+++ M + S +R N HT C++CG S
Sbjct: 213 ETEAMADISESSKQRENPYHTYCKQCGES 241
>BT011387-1|AAR96179.1| 1322|Drosophila melanogaster GH10077p
protein.
Length = 1322
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 291 KSDKMTKGTSSFGKRRNKTHTLCRRCGRS 205
+++ M + S +R N HT C++CG S
Sbjct: 220 ETEAMADISESSKQRENPYHTYCKQCGES 248
>AY061630-1|AAL29178.1| 680|Drosophila melanogaster SD10769p
protein.
Length = 680
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 207 SSYHIQKSKCAQCGYPAAKLRSYHWS 130
S + Q AQCG AA +R Y WS
Sbjct: 593 SGFESQPRPEAQCGTGAATVRDYGWS 618
>AE014296-2912|AAF49339.1| 1322|Drosophila melanogaster CG18265-PA
protein.
Length = 1322
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 291 KSDKMTKGTSSFGKRRNKTHTLCRRCGRS 205
+++ M + S +R N HT C++CG S
Sbjct: 220 ETEAMADISESSKQRENPYHTYCKQCGES 248
>AE013599-2895|AAF57554.1| 680|Drosophila melanogaster CG7744-PA
protein.
Length = 680
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 207 SSYHIQKSKCAQCGYPAAKLRSYHWS 130
S + Q AQCG AA +R Y WS
Sbjct: 593 SGFESQPRPEAQCGTGAATVRDYGWS 618
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,872,356
Number of Sequences: 53049
Number of extensions: 248355
Number of successful extensions: 937
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 610819518
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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