Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18g21
(718 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1819 + 40110697-40110721,40110818-40110828,40111228-401115... 41 9e-04
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 40 0.002
12_01_0961 + 9566730-9566998,9567096-9567187,9567294-9567427,956... 36 0.024
07_03_1651 - 28395369-28395436,28395524-28395575,28395857-283960... 36 0.024
09_04_0706 + 19627024-19627380,19629945-19629976,19630657-196307... 36 0.042
01_05_0220 - 19434011-19434802 36 0.042
02_04_0653 - 24747959-24748276,24748847-24748959,24749815-247500... 35 0.056
12_02_0719 + 22500217-22500395,22500506-22500551,22500671-225007... 33 0.23
03_05_0226 - 22115285-22115404,22115477-22116661,22117037-221178... 33 0.23
01_01_0475 + 3500385-3500880,3501078-3501154,3501851-3502019,350... 33 0.23
06_03_0336 + 19671500-19672150,19672681-19673301 31 0.91
05_05_0173 + 22956927-22958615 31 0.91
04_03_0205 + 12649724-12650191,12651493-12652025,12652114-126522... 31 0.91
02_05_0890 - 32546918-32547088,32547224-32547334,32547705-325478... 31 0.91
01_06_1224 - 35508842-35510404 31 0.91
06_01_1173 + 10014391-10014678,10015478-10017245,10017333-100174... 31 1.2
01_06_0829 - 32270189-32270863 31 1.2
12_02_0130 + 14026460-14027017 30 1.6
05_07_0126 + 27869058-27869805,27869988-27870328,27870430-278705... 30 1.6
01_06_0344 - 28576568-28576699,28576881-28576961,28577036-285771... 30 1.6
08_02_0937 + 22801526-22802461 30 2.1
06_03_0841 - 25297531-25298547 30 2.1
12_01_0672 + 5731288-5731356,5732032-5732117,5732634-5732724,573... 29 2.8
04_04_0906 - 29297188-29297706 29 2.8
12_01_0914 + 8901915-8902574 29 3.7
12_01_0271 - 1972992-1973585 29 3.7
12_01_0267 - 1939123-1939722 29 3.7
08_01_0413 - 3679887-3681254 29 3.7
07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012... 29 3.7
06_02_0066 - 11081446-11081544,11081639-11081846,11083122-110832... 29 3.7
03_05_0513 - 25073518-25073623,25073719-25073777,25074048-250741... 29 3.7
03_02_0715 + 10621789-10623243,10624074-10625018 29 3.7
02_05_0619 + 30409313-30409785,30411257-30411746 29 3.7
12_02_0132 - 14054331-14054969 29 4.9
08_02_1334 - 26224546-26225337 29 4.9
04_03_0830 - 20125827-20125913,20126262-20126357,20126974-201270... 29 4.9
03_05_0800 - 27815322-27815838,27817549-27817805 29 4.9
03_05_0677 + 26663880-26664581 29 4.9
03_01_0351 - 2758646-2759518 29 4.9
02_02_0262 - 8396755-8397244,8398659-8398705 29 4.9
10_03_0012 - 7037088-7037282,7037453-7037954,7038079-7038081,704... 28 6.4
09_04_0651 - 19224403-19225032 28 6.4
07_03_1459 + 26681619-26682419,26682600-26682912,26683861-26684672 28 6.4
04_04_0918 - 29411239-29411373,29412276-29412526,29412772-294130... 28 6.4
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 28 6.4
12_02_1243 + 27300978-27301682 28 8.5
09_04_0634 - 19132916-19134033,19134716-19135915,19136002-191361... 28 8.5
07_01_1116 + 10308029-10308111,10308575-10308737,10308996-103090... 28 8.5
07_01_0218 - 1623373-1625418 28 8.5
06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-26... 28 8.5
05_06_0046 - 25157093-25157431,25157810-25157928,25158024-251581... 28 8.5
03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105 28 8.5
02_05_0316 - 27825871-27826509 28 8.5
02_04_0596 + 24195863-24196179,24196257-24196359 28 8.5
02_03_0412 - 18749430-18749587,18749696-18749857,18750062-187501... 28 8.5
01_06_1720 + 39421381-39421444,39422424-39422601,39422812-394229... 28 8.5
01_03_0015 + 11669321-11670070 28 8.5
>01_06_1819 +
40110697-40110721,40110818-40110828,40111228-40111572,
40111707-40111782,40113605-40113771,40113818-40114036
Length = 280
Score = 41.1 bits (92), Expect = 9e-04
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -2
Query: 714 LQKCXHPTKLSCGHVFCFLCVKGVAHQSRKCAMCRTEIPLDYFENPVL 571
+ + P+ CGH+FC C+K +KC CR ++ ++ F L
Sbjct: 229 MNELVEPSSTICGHIFCKQCIKASIQAQKKCPTCRRKLTMNNFHRVYL 276
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -2
Query: 714 LQKCXHPTKLSCGHVFCFLCVKGVAHQSRKCAMCRTEIPLDYFENPVL 571
L K P+ +CGH+FC C++ +KC CR + + F L
Sbjct: 323 LNKLDKPSTTNCGHIFCEKCIQAWLKAQKKCPTCRKSLGIKSFHRVYL 370
>12_01_0961 +
9566730-9566998,9567096-9567187,9567294-9567427,
9567542-9567591,9569026-9569100,9569179-9569734
Length = 391
Score = 36.3 bits (80), Expect = 0.024
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 714 LQKCXHPTKLSCGHVFCFLCVKGVAHQ-SRKCAMCR 610
L+ C P+ CGH FC C+K A + ++C CR
Sbjct: 168 LEICFEPSTTPCGHSFCMKCLKHAAAKCGKRCPKCR 203
>07_03_1651 -
28395369-28395436,28395524-28395575,28395857-28396092,
28396362-28396419,28396509-28396577,28396686-28396791,
28397104-28397171,28397266-28397385,28398144-28398231,
28399433-28399534,28399699-28399757,28399866-28400003,
28400222-28400473,28400508-28400593,28401061-28401165,
28402351-28402516
Length = 590
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 11/59 (18%)
Frame = -2
Query: 696 PTKLSCGHVFCFLC---------VKGV--AHQSRKCAMCRTEIPLDYFENPVLLDKSNL 553
P LSCGH++C+LC V G+ A + KC +CR F N V LD+ N+
Sbjct: 209 PVALSCGHIYCYLCSCSAASVTIVDGLKSAERKSKCPLCR---QAGVFPNAVHLDELNM 264
>09_04_0706 +
19627024-19627380,19629945-19629976,19630657-19630751,
19632116-19632281,19632881-19632938,19633014-19633061,
19633274-19633464,19633580-19633702,19635174-19635289,
19635841-19635924,19636009-19636259,19636438-19636647
Length = 576
Score = 35.5 bits (78), Expect = 0.042
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSRKCAMCRTEIPLD 592
P+ L+CGHV+C C+ V + +C C P +
Sbjct: 416 PSVLNCGHVYCMPCLTSVGGEELECQFCGAPHPAE 450
>01_05_0220 - 19434011-19434802
Length = 263
Score = 35.5 bits (78), Expect = 0.042
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSRKCAMCRTEIPLDYFENPVLLDKSNLQYAA 541
P +L CGH F C+ G + R C MCR + F VL QY A
Sbjct: 200 PVRLPCGHAFHGQCIAGWLLEGRTCPMCRRD-----FSRLVLAPSCYQQYGA 246
>02_04_0653 -
24747959-24748276,24748847-24748959,24749815-24750015,
24750097-24750267,24750354-24750425,24751515-24751543,
24752161-24752303
Length = 348
Score = 35.1 bits (77), Expect = 0.056
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSRKCAMCRTEIPLDY 589
P L+CGHV+C C+ + + KC +C P D+
Sbjct: 131 PAVLNCGHVYCMSCLSSLDDGALKCQVCGGLHPGDF 166
>12_02_0719 +
22500217-22500395,22500506-22500551,22500671-22500745,
22500846-22500932,22501077-22501148,22501267-22501338,
22501448-22501519,22501644-22502510
Length = 489
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = -2
Query: 261 IEIKDETEDNVNENHDNAETEIIITDNVQNSNGSEHILNQNVSSVQSEDIDD 106
++ ++ TED+ N ++AE EII+ +N N +E+ + + + E+ D+
Sbjct: 177 MDTENVTEDDDNSGKNDAENEIIVNENEGEENSAENTFSLSSPDITLEEHDN 228
>03_05_0226 -
22115285-22115404,22115477-22116661,22117037-22117861,
22118029-22118106,22118370-22118420,22118510-22118581,
22118666-22118667,22119453-22119557,22119668-22119749,
22120178-22120227,22120514-22120567,22121084-22121164,
22121567-22121656,22121884-22121964,22122304-22122544
Length = 1038
Score = 33.1 bits (72), Expect = 0.23
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Frame = -2
Query: 258 EIKDET-EDNVNENHDNAETEIIITDNVQNS-NGSEHILNQ---NVSSVQSEDIDDVVSR 94
+++DE EDN EN + + NVQNS + S I NQ NV +V+S D+D
Sbjct: 303 QVEDEDLEDNELENWNLDMFNLSNGQNVQNSADNSTEIGNQATTNVDTVESNDLDANGEM 362
Query: 93 ISTLDLNN 70
++ D+NN
Sbjct: 363 LTEEDINN 370
>01_01_0475 +
3500385-3500880,3501078-3501154,3501851-3502019,
3502385-3502473,3502601-3502765,3502841-3502918,
3503087-3503190,3503317-3503422
Length = 427
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 711 QKCXHPTKLSCGHVFCFLCVKGVAHQSRKCAMCRTEI-PLD 592
+K P L C H+FC CV + R C +CR + P D
Sbjct: 371 EKMHTPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAD 411
>06_03_0336 + 19671500-19672150,19672681-19673301
Length = 423
Score = 31.1 bits (67), Expect = 0.91
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 684 SCGHVFCFLCVKGVAHQSRKCAMCRTEI 601
SCGH+F C+ H R C +CR ++
Sbjct: 166 SCGHLFHVDCIDMWLHAHRTCPLCRRDL 193
>05_05_0173 + 22956927-22958615
Length = 562
Score = 31.1 bits (67), Expect = 0.91
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAH---QSRKCAMCRTEI 601
P SCGH+FC+ C+ H ++C +C+ E+
Sbjct: 248 PVVTSCGHLFCWPCLYQWLHVHSTHKECPVCKGEV 282
>04_03_0205 +
12649724-12650191,12651493-12652025,12652114-12652239,
12652625-12652724,12652880-12652899,12653035-12653137,
12653213-12653351,12653448-12653662,12653772-12654320
Length = 750
Score = 31.1 bits (67), Expect = 0.91
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 5/85 (5%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCV-KGVAHQSRKCAMCRT----EIPLDYFENPVLLDKSNLQYAANVD 532
P CGH FC C + + + R C +CR ++ D N L+ + AAN
Sbjct: 154 PVTTPCGHNFCLKCFRRWIENGKRACVICRAPITQKVAQDLRINLALVQAIRMAKAANNA 213
Query: 531 GVEGFQWYYEGRNGWWKYDERSNSE 457
G Y + K D +E
Sbjct: 214 STTGETTVYHYKENEDKPDRAFTTE 238
>02_05_0890 -
32546918-32547088,32547224-32547334,32547705-32547884,
32547960-32548064,32548333-32548431,32548524-32548679,
32548772-32548850,32549213-32549278,32549382-32549536,
32549675-32550034,32550150-32550305,32550779-32550856,
32551471-32551812
Length = 685
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -2
Query: 684 SCGHVFCFLCVKGVAHQSRK--CAMCRTEIPLDYFENPVLLDK 562
+CGH FC++C+ V H S K C C + LLDK
Sbjct: 74 ACGHSFCYMCI--VTHLSHKSDCPCCGNYLTKAQLYPNFLLDK 114
>01_06_1224 - 35508842-35510404
Length = 520
Score = 31.1 bits (67), Expect = 0.91
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCV---KGVAHQSRKCAMCRTEI 601
P SCGH+FC+ C+ V ++C +C+ E+
Sbjct: 204 PVVTSCGHLFCWPCLYQWLNVYSNHKECPVCKGEV 238
>06_01_1173 +
10014391-10014678,10015478-10017245,10017333-10017436,
10017632-10017706,10017887-10017918,10019396-10019482,
10020848-10021294,10021477-10021630,10022203-10022329,
10022547-10022632,10022719-10022790,10023083-10023286,
10023732-10024049
Length = 1253
Score = 30.7 bits (66), Expect = 1.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 681 CGHVFCFLCVKGVAHQSRKCAMCR 610
C H FCF+C+ A +C C+
Sbjct: 45 CAHHFCFVCIMAWARVESRCPFCK 68
>01_06_0829 - 32270189-32270863
Length = 224
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -2
Query: 714 LQKCXHPTKLSCGHVFCFLCVKGVAH---QSRKCAMCR 610
L+ P CGH+FC+ C+ H SR+C +C+
Sbjct: 31 LELAQDPVVTLCGHLFCWPCLYEWLHVHAHSRECPVCK 68
>12_02_0130 + 14026460-14027017
Length = 185
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 684 SCGHVFCFLCVKGVAHQSRKCAMCRTEI 601
+CGH F CV G C MCR ++
Sbjct: 141 ACGHAFHAPCVDGWLRDHATCPMCRADV 168
>05_07_0126 +
27869058-27869805,27869988-27870328,27870430-27870510,
27870978-27871073,27871152-27871307,27871575-27871721
Length = 522
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 687 LSCGHVFCFLCVKGVAHQSRKCAMCR-TEIPLD 592
L CGH + +C+KG C +C+ T +P D
Sbjct: 486 LGCGHKYHAMCIKGWLMVKNLCPICKTTALPAD 518
>01_06_0344 -
28576568-28576699,28576881-28576961,28577036-28577131,
28578862-28579038,28579633-28580130
Length = 327
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 690 KLSCGHVFCFLCVKGVAHQSRKCAMCRTEI 601
+L CGH + C+K Q C +C+T +
Sbjct: 295 RLDCGHSYHVYCIKQWLSQKNVCPVCKTAV 324
>08_02_0937 + 22801526-22802461
Length = 311
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -2
Query: 690 KLSCGHVFCFLCVKGVAHQSRKCAMCRTEIPLD 592
+L CGH++ C+ C +CR+ +P D
Sbjct: 189 RLPCGHLYHSECIVQWLEMRNSCPVCRSRLPSD 221
>06_03_0841 - 25297531-25298547
Length = 338
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 693 TKLSCGHVFCFLCVKGVAHQSRKCAMCRTEIPLD 592
T+L C H++ C++ C +CR E+P D
Sbjct: 278 TQLPCAHLYHGACIEPWLAIRNSCPVCRYELPTD 311
>12_01_0672 +
5731288-5731356,5732032-5732117,5732634-5732724,
5732886-5732935,5733339-5733408,5733508-5733617,
5733943-5734463,5734856-5734949,5735095-5735225,
5735241-5736274,5736383-5736457,5736615-5737104,
5737375-5738009,5738166-5738378
Length = 1222
Score = 29.5 bits (63), Expect = 2.8
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -2
Query: 681 CGHVFCFLCVKGVAHQSRKCAMCRTE 604
C H FC+ C+ + + +C +C++E
Sbjct: 49 CQHWFCYTCIDNWSAITNRCPLCKSE 74
>04_04_0906 - 29297188-29297706
Length = 172
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 684 SCGHVFCFLCVKGVAHQSRKCAMCRTEI 601
SC H F C+ G ++ C +CRT +
Sbjct: 137 SCSHAFHAACIDGWVVEAGTCPLCRTPV 164
>12_01_0914 + 8901915-8902574
Length = 219
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 258 EIKDETEDNVNENHDNAETEIIITD 184
E++D+++ VNE +DN E EI + D
Sbjct: 137 EVEDKSKSKVNEANDNLEEEIALLD 161
>12_01_0271 - 1972992-1973585
Length = 197
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 693 TKLSCGHVFCFLCVKGVAHQSRKCAMCRTEIP 598
T++ C H F C+ S +C +CR +P
Sbjct: 160 TRMPCSHCFHATCILDWLRLSHRCPLCRFPMP 191
>12_01_0267 - 1939123-1939722
Length = 199
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 693 TKLSCGHVFCFLCVKGVAHQSRKCAMCRTEIP 598
T++ C H F C+ S +C +CR +P
Sbjct: 162 TRMPCSHCFHATCILDWLRLSHRCPLCRFPMP 193
>08_01_0413 - 3679887-3681254
Length = 455
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAH---QSRKCAMCRTEI 601
P CGH+FC+ C+ H + C +C+ E+
Sbjct: 251 PVVTPCGHLFCWPCIYQWLHGHSEHSDCPVCKGEV 285
>07_03_1762 -
29299328-29299437,29299782-29299871,29300487-29301291,
29301956-29303278
Length = 775
Score = 29.1 bits (62), Expect = 3.7
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 681 CGHVFCFLCVKGVAHQSRKCAMCR 610
C H FCF C+ + +C +C+
Sbjct: 388 CAHYFCFACIMEWSKVESRCPLCK 411
>06_02_0066 -
11081446-11081544,11081639-11081846,11083122-11083257,
11083339-11083541,11083616-11083765,11083848-11083964,
11084623-11085119
Length = 469
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 690 KLSCGHVFCFLCVKGVAHQSRKCAMCRTEI 601
KL CGH+F C++ + C CR I
Sbjct: 272 KLLCGHLFHVHCLRSWLERQHTCPTCRAPI 301
>03_05_0513 -
25073518-25073623,25073719-25073777,25074048-25074185,
25074719-25074982,25075062-25075306,25075874-25076081
Length = 339
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 714 LQKCXHPTKLSCGHVFCFLCVKGVA 640
L +P LSCGH+FC C G A
Sbjct: 239 LDTLFNPYALSCGHLFCKGCACGAA 263
>03_02_0715 + 10621789-10623243,10624074-10625018
Length = 799
Score = 29.1 bits (62), Expect = 3.7
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 681 CGHVFCFLCVKGVAHQSRKCAMCR 610
C H FCF C+ + +C +C+
Sbjct: 432 CSHYFCFACIMQWSKVESRCPLCK 455
>02_05_0619 + 30409313-30409785,30411257-30411746
Length = 320
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 681 CGHVFCFLCVKGVAHQSRKCAMCRTEI 601
C H F CV QSR C +CR E+
Sbjct: 98 CEHGFHARCVDSWLRQSRVCPICRAEV 124
>12_02_0132 - 14054331-14054969
Length = 212
Score = 28.7 bits (61), Expect = 4.9
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -2
Query: 684 SCGHVFCFLCVKGVAHQSRKCAMCRTEI 601
+CGH F C+ G C +CR ++
Sbjct: 173 ACGHAFHAACIDGWLRAHATCPVCRADV 200
>08_02_1334 - 26224546-26225337
Length = 263
Score = 28.7 bits (61), Expect = 4.9
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 687 LSCGHVFCFLCVKGVAHQSRKCAMCRTEI 601
+ CGH FC C + + +C +C I
Sbjct: 228 IPCGHTFCRTCARELLAGRGRCPLCNAAI 256
>04_03_0830 -
20125827-20125913,20126262-20126357,20126974-20127053,
20127124-20127220,20127457-20127544,20128491-20128576,
20129358-20130530
Length = 568
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 325 PLHPPPASMITSTELSH 375
P HPPPAS +ST SH
Sbjct: 71 PFHPPPASASSSTPTSH 87
>03_05_0800 - 27815322-27815838,27817549-27817805
Length = 257
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +2
Query: 452 SNSELLRSSYFHQPFLPS*YHWNPSTPSTLAAY*RLDLSNRTGFSK*SKGISVRHIAHFL 631
S +EL +Y H ++ Y+ + P L A L + R GF K SV HI++ +
Sbjct: 15 STTELCEENYAHSSYIAEFYNTVSNVPCVLLALVGLVNALRQGF---EKRFSVLHISNMI 71
Query: 632 L 634
L
Sbjct: 72 L 72
>03_05_0677 + 26663880-26664581
Length = 233
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAH---QSRKCAMCRTEIPLD 592
P CGH+FC+ C+ H S +C +C+ + D
Sbjct: 34 PIVTLCGHLFCWPCIYRWLHIHAHSPECPVCKAVVEED 71
>03_01_0351 - 2758646-2759518
Length = 290
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 684 SCGHVFCFLCVKGVAHQSRKCAMCRTEI 601
SC H F C+ H + C +CRT +
Sbjct: 130 SCSHAFHIDCIDTWLHHNVSCPLCRTVV 157
>02_02_0262 - 8396755-8397244,8398659-8398705
Length = 178
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 684 SCGHVFCFLCVKGVAHQSRKCAMCRTEI 601
+C H+F C+ H R C MCR ++
Sbjct: 123 ACKHLFHVECIDMWLHSHRTCPMCRCDL 150
>10_03_0012 -
7037088-7037282,7037453-7037954,7038079-7038081,
7040633-7041213
Length = 426
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 693 TKLSCGHV-FCFLCVKGVAHQSRKCAMCRTEI 601
T L C H+ C C K + +Q+ +C +CR +
Sbjct: 355 TVLPCRHMCMCSECAKVLRYQTNRCPICRQPV 386
>09_04_0651 - 19224403-19225032
Length = 209
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 687 LSCGHVFCFLCVKGVAHQSRKCAMCRTEI 601
+ CGH FC C + + +C +C I
Sbjct: 174 IPCGHTFCRACARELRVGRGRCPLCNAAI 202
>07_03_1459 + 26681619-26682419,26682600-26682912,26683861-26684672
Length = 641
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -2
Query: 684 SCGHVFCFLCV-KGVAHQSRKCAMCRTEI 601
SC H++C C+ K + S +C +CR +
Sbjct: 409 SCTHIYCQTCIMKILKSSSSRCPICRRSL 437
>04_04_0918 -
29411239-29411373,29412276-29412526,29412772-29413009,
29413133-29414251,29414540-29415106
Length = 769
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = -2
Query: 123 SEDIDDVVSRISTLDLNNADSNGLIDES*MKISKLHLSNGS 1
S D ++ S++ST+DLNN+ ++ +++ IS +H +N S
Sbjct: 202 SIDSMEIWSKLSTMDLNNSQNDAILN----CISSMHSNNSS 238
>03_03_0246 + 15789635-15794227,15794314-15794555,15794630-15794771,
15796089-15796272,15796349-15796696,15796753-15797450,
15798208-15798900
Length = 2299
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = -2
Query: 561 SNLQYAANVDGVEGFQWYYEGRNGWWK---YDERSNSELENAFNNGESE 424
S + ++ V +E +W E K YDE SNS E+ N G+ E
Sbjct: 939 SRINTSSTVSHLEDDEWPSENNENRQKQDEYDEESNSYQEDEINEGDDE 987
>12_02_1243 + 27300978-27301682
Length = 234
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAH---QSRKCAMCRTEIPLD 592
P CGH+FC+ C+ H S +C +C+ + D
Sbjct: 35 PIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEED 72
>09_04_0634 -
19132916-19134033,19134716-19135915,19136002-19136106,
19136273-19136315,19137622-19137740,19138074-19138172,
19138264-19138480
Length = 966
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/67 (22%), Positives = 33/67 (49%)
Frame = -2
Query: 282 TNINQVPIEIKDETEDNVNENHDNAETEIIITDNVQNSNGSEHILNQNVSSVQSEDIDDV 103
T+ + PI ++ ED+++ H +E + + ++N N + VQ+ED +
Sbjct: 334 TSQSTSPIMVESLMEDSMDALHIISEVSPSLEEKAGSANAESVTENSRIDFVQTEDQLKL 393
Query: 102 VSRISTL 82
+ ++TL
Sbjct: 394 TNAVNTL 400
>07_01_1116 +
10308029-10308111,10308575-10308737,10308996-10309062,
10309120-10309375,10309658-10309781,10310039-10310077
Length = 243
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/35 (25%), Positives = 14/35 (40%)
Frame = -2
Query: 714 LQKCXHPTKLSCGHVFCFLCVKGVAHQSRKCAMCR 610
++ C +C H C C + +S C CR
Sbjct: 167 METCTKMVLPNCSHAMCIKCYRDWYRRSESCPFCR 201
>07_01_0218 - 1623373-1625418
Length = 681
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 183 NVQNS-NGSEHILNQNVSSVQSEDIDDVVSRISTLDLNNADS 61
NVQN N S H+L + ++QS + D+ + +D+N S
Sbjct: 137 NVQNDGNASNHMLAVELDTIQSVEFRDINANHVGVDINGLQS 178
>06_01_0026 +
265755-265968,267319-267468,267694-267738,267786-268460,
268779-268843,268854-269073,269163-269438,269547-269663,
269776-269853,269930-270184,270235-270323,270403-270816
Length = 865
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/82 (23%), Positives = 38/82 (46%)
Frame = -2
Query: 246 ETEDNVNENHDNAETEIIITDNVQNSNGSEHILNQNVSSVQSEDIDDVVSRISTLDLNNA 67
ET++N N N + +N SNGS + N S ++ + + + + + + +
Sbjct: 175 ETQENANSQETNENSNNSSLENRSPSNGSHEVCN----SGETVTVANGKAGLKVITIIDK 230
Query: 66 DSNGLIDES*MKISKLHLSNGS 1
+ NGL + + LH++N S
Sbjct: 231 NQNGLANSN----GSLHIANVS 248
>05_06_0046 -
25157093-25157431,25157810-25157928,25158024-25158189,
25158289-25158415,25158490-25158590,25158719-25158905,
25159000-25159100,25159220-25160194,25160325-25160423,
25160500-25160972,25161307-25161420,25161830-25161900,
25162015-25162086,25162334-25162377
Length = 995
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = -2
Query: 687 LSCGHVFCFLCVKGVAHQSRKCAMCRTEI------PLDYFENPVLLDKSNLQYAANVDGV 526
+SC HVFC C+ + C +C+ P + +N V + KS ++ AA + V
Sbjct: 31 ISCNHVFCNDCLTESMKSTSSCPVCKVPFRRREMRPAPHMDNLVSIFKS-MEAAAGTNVV 89
>03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105
Length = 430
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 693 TKLSCGHV-FCFLCVKGVAHQSRKCAMCRTEI 601
T L C H+ C C K + +Q+ +C +CR +
Sbjct: 350 TVLPCRHMCMCSECAKVLRYQTTRCPICRQPV 381
>02_05_0316 - 27825871-27826509
Length = 212
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -2
Query: 684 SCGHVFCFLCV-KGVAHQSRKCAMCRTEI 601
+C HVF C+ + +AH+ R C +CR +
Sbjct: 134 NCRHVFHRGCLDRWMAHEQRTCPLCRAPL 162
>02_04_0596 + 24195863-24196179,24196257-24196359
Length = 139
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 459 QSCYAHHISTNHFFLHNTIGILLLHQHWQH 548
+ +A H+S++ FFLH + + L W H
Sbjct: 90 EGIFALHLSSDRFFLHRRLPVTLGVMGWAH 119
>02_03_0412 -
18749430-18749587,18749696-18749857,18750062-18750194,
18751640-18751744,18751818-18751935,18752232-18752320,
18752407-18753660,18753785-18753831,18754285-18754339,
18754783-18754884
Length = 740
Score = 27.9 bits (59), Expect = 8.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCV 652
P SCGH++CF C+
Sbjct: 242 PQITSCGHIYCFPCI 256
>01_06_1720 +
39421381-39421444,39422424-39422601,39422812-39422980,
39423101-39423170,39423259-39423487,39425130-39425340
Length = 306
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = -2
Query: 714 LQKCXHPTKLSCGHVFCFLCVKGVAHQSRKCAMCR 610
L+ C +C H C C + +S+ C CR
Sbjct: 214 LETCTKMVLPNCNHAMCINCYRDWYTRSQSCPFCR 248
>01_03_0015 + 11669321-11670070
Length = 249
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -2
Query: 681 CGHVFCFLCVKGVAHQSRKCAMCRTEIPLDY 589
CGH F C+ ++ C +CR ++ Y
Sbjct: 166 CGHRFHVECIDAWFRENSTCPLCRADVEAPY 196
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,497,551
Number of Sequences: 37544
Number of extensions: 316158
Number of successful extensions: 1253
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1252
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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