Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18g21
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical p... 69 3e-12
AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical... 51 1e-06
U40421-3|AAA81439.2| 347|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical pr... 41 0.001
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 36 0.022
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 36 0.022
AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical ... 35 0.067
AL032654-10|CAB63391.1| 819|Caenorhabditis elegans Hypothetical... 34 0.088
U41026-1|AAM51522.2| 101|Caenorhabditis elegans Hypothetical pr... 33 0.15
L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein. 33 0.15
AF106580-2|AAK71369.1| 439|Caenorhabditis elegans Abnormal embr... 33 0.15
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z37983-5|CAA86059.2| 405|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z81547-2|CAB04460.1| 209|Caenorhabditis elegans Hypothetical pr... 31 0.62
U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w... 31 0.82
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical ... 31 1.1
AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical ... 31 1.1
AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical ... 31 1.1
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 31 1.1
AC017117-2|AAF16617.1| 295|Caenorhabditis elegans Hypothetical ... 31 1.1
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 30 1.4
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 30 1.4
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 30 1.4
Z75710-5|CAB54207.1| 240|Caenorhabditis elegans Hypothetical pr... 30 1.9
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 30 1.9
U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 29 2.5
U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical pr... 29 2.5
U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical p... 29 3.3
AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical ... 29 3.3
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 29 4.4
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 29 4.4
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 29 4.4
AC025724-2|AAG23378.2| 167|Caenorhabditis elegans Hypothetical ... 29 4.4
Z92831-5|CAJ58498.1| 247|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z83218-7|CAB05685.2| 283|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z49911-3|CAA90126.2| 735|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF098987-7|AAC67430.1| 310|Caenorhabditis elegans Forkhead tran... 28 5.8
AF016683-9|AAB66197.1| 299|Caenorhabditis elegans Hypothetical ... 28 5.8
Z50070-8|CAA90397.1| 263|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical ... 28 7.7
AF039047-9|AAB94228.1| 303|Caenorhabditis elegans Hypothetical ... 28 7.7
AC026301-1|AAK68897.1| 280|Caenorhabditis elegans Hypothetical ... 28 7.7
AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical
protein C55A6.1 protein.
Length = 228
Score = 68.9 bits (161), Expect = 3e-12
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 31/142 (21%)
Frame = -2
Query: 696 PTKL-SCGHVFCFLCVKGV-AHQSRKCAMCRTEIPLDYF--------------ENPVLLD 565
PT + +CGH FCF+C+KGV + C MCR I + F ++P++
Sbjct: 22 PTTIPACGHKFCFICLKGVYMNDMGGCPMCRGPIDSNIFAQPSQVLDLKMNVPKSPIVTL 81
Query: 564 K--------SN-----LQYAANV-DGVEGFQWYYEGRN-GWWKYDERSNSELENAFNNGE 430
K SN L A++ D E W Y G+N GWW+++ R+ E+E A+N G+
Sbjct: 82 KPKTAATLNSNQNVPALDLDASICDPEERKYWIYSGKNQGWWRFEPRNEREIEEAYNAGK 141
Query: 429 SECTLLLAGTLYIVDFQAMTQF 364
C +++ G Y++DF Q+
Sbjct: 142 CHCEVVICGRPYVIDFHQFLQY 163
>AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical
protein Y105E8A.14 protein.
Length = 224
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 513 WYYEGRN-GWWKYDERSNSELENAFNNGESECTLLLAGTLYIVDFQAMTQF 364
W Y GR+ GWW++D R E+E AF + + + G YIVDF M Q+
Sbjct: 132 WLYRGRHQGWWRFDPRIEKEIEEAFTHQMPMTEVTICGNPYIVDFSQMCQY 182
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = -2
Query: 696 PTKL-SCGHVFCFLCVKGVA-HQSRKCAMCRTEIPLDYFENPV 574
PT + SCGH FCF+C+KGV+ + C +CR I F+ P+
Sbjct: 34 PTTIPSCGHKFCFICLKGVSVSNNGDCPICRGPIDSQIFKKPL 76
>U40421-3|AAA81439.2| 347|Caenorhabditis elegans Hypothetical
protein C02B8.6 protein.
Length = 347
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = -2
Query: 558 NLQYAANVDGVEGFQWYYEGR-NGWWKYDERSNSELENAFNNGESECTLLLAGTLYIVDF 382
N+Q NV V+ F W Y R +GWW++D+R ++E+ F + + L G YI+DF
Sbjct: 244 NVQANFNVARVKFF-WLYSSRGDGWWRFDQRCEKDIEDEFLANKPNMEMYLFGKPYILDF 302
Query: 381 QAMTQF 364
AM Q+
Sbjct: 303 VAMRQW 308
Score = 39.5 bits (88), Expect = 0.002
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKG-VAHQSRKCAMCR 610
P +L C H FC++C+KG + + CA+CR
Sbjct: 15 PVRLDCNHEFCYICIKGSIQNDMLNCAVCR 44
>U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical
protein C26B9.6 protein.
Length = 306
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 696 PTKL-SCGHVFCFLCVKGVAHQSRKCAMCRTEIPLDYFENPVLLD 565
PT++ +CGH FC++C+K C +CR +I F P+ D
Sbjct: 117 PTRIENCGHEFCYVCLKSNFAMGNDCPVCRGKISPSLFSMPIRYD 161
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/55 (18%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -2
Query: 519 FQWYYEGRN---GWWKYDERSNSELENAFNNGESECTLLLAGTLYIVDFQAMTQF 364
+ W Y N +++ + +EN++ + C + + G + +DF+ M ++
Sbjct: 10 YLWIYNDGNCKSNMYEFHKDLQEHIENSYKRKKKTCKVSIFGVTHTIDFEKMLKY 64
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSRKCAMCRTEIPLD 592
P KL C HVFC C++ Q C +CR E+ D
Sbjct: 347 PIKLECTHVFCKFCIETWLDQKSTCPICRAEVTKD 381
>Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical
protein C16C10.5 protein.
Length = 409
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = -2
Query: 690 KLSCGHVFCFLCVKG--VAHQSRKCAMCRTEIPLD-YFENPVLLDKSNLQYAANVDGV 526
KLSCGHVF C++G V + + C C+ + L F+NP +K +L Y +D +
Sbjct: 330 KLSCGHVFHEFCIRGWVVVGKLQTCPYCKERVDLQRMFKNP--WEKPHLFYGKLLDWI 385
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = -2
Query: 714 LQKCXHPTKLSCGHVFCFLCVKGVA---HQSRKCAMCRTE--IPLD 592
L + P L C H FC+ C++ A H++ KC CR E IP D
Sbjct: 47 LDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRAEHNIPYD 92
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = -2
Query: 714 LQKCXHPTKLSCGHVFCFLCVKGVA---HQSRKCAMCRTE--IPLD 592
L + P L C H FC+ C++ A H++ KC CR E IP D
Sbjct: 47 LDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRAEHNIPYD 92
>AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical
protein F40G9.14 protein.
Length = 261
Score = 34.7 bits (76), Expect = 0.067
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSR-KCAMC-RTEIPLDYFENPVLLDKSN 556
P +CGH +C C++ HQ + KC C T +++ N ++L+ N
Sbjct: 153 PRVFNCGHTYCESCIQVCKHQFQIKCPFCTTTSYQINFSTNKLILEVLN 201
>AL032654-10|CAB63391.1| 819|Caenorhabditis elegans Hypothetical
protein Y52B11A.10 protein.
Length = 819
Score = 34.3 bits (75), Expect = 0.088
Identities = 17/71 (23%), Positives = 40/71 (56%)
Frame = -2
Query: 252 KDETEDNVNENHDNAETEIIITDNVQNSNGSEHILNQNVSSVQSEDIDDVVSRISTLDLN 73
K+ ED +++++ E E ++ + +G+E L++ V+SED +D+V + + + +
Sbjct: 203 KELMEDELDDDNMEDEEEFEDEEDEADESGNELDLSEGEEPVESEDDEDMVDEMMSDEED 262
Query: 72 NADSNGLIDES 40
N D +++ S
Sbjct: 263 NVDDEKIVEIS 273
>U41026-1|AAM51522.2| 101|Caenorhabditis elegans Hypothetical
protein C28G1.5 protein.
Length = 101
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSR-KCAMCRT 607
P L+CGH C C+ + + S +C CRT
Sbjct: 22 PRNLTCGHALCHKCITAMVNNSTVECPFCRT 52
>L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein.
Length = 627
Score = 33.5 bits (73), Expect = 0.15
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSRKCAMCRTEI 601
P ++CGH +C C++ +R C +C+ ++
Sbjct: 66 PVMVTCGHSYCEPCIERHTRDTRACVICKLDV 97
>AF106580-2|AAK71369.1| 439|Caenorhabditis elegans Abnormal
embryonic partitioningof cytoplasm protein 2, isoform a
protein.
Length = 439
Score = 33.5 bits (73), Expect = 0.15
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSRKCAMCRTEI 601
P ++CGH +C C++ +R C +C+ ++
Sbjct: 66 PVMVTCGHSYCEPCIERHTRDTRACVICKLDV 97
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 33.1 bits (72), Expect = 0.20
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSRKCAMCR 610
P + CGH +C C++ + + KC +CR
Sbjct: 18 PCIIECGHSYCRFCIESHLNINEKCPLCR 46
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 32.3 bits (70), Expect = 0.36
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSRKCAMCRTEI 601
P +L C HVF C++ + + C CRT+I
Sbjct: 305 PKRLPCSHVFHAHCLRSWFQRQQTCPTCRTDI 336
>Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical
protein F08G12.5 protein.
Length = 185
Score = 32.3 bits (70), Expect = 0.36
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAH 637
P L+CGH FC C++ VAH
Sbjct: 51 PQTLTCGHSFCHRCIEEVAH 70
>Z37983-5|CAA86059.2| 405|Caenorhabditis elegans Hypothetical
protein B0393.6 protein.
Length = 405
Score = 31.9 bits (69), Expect = 0.47
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCV-KGVAHQSRKCAMCRTE 604
P L C H FC +C+ K + R C +C+T+
Sbjct: 29 PHVLPCSHTFCLMCLSKHDQRKKRHCLICKTK 60
>Z81547-2|CAB04460.1| 209|Caenorhabditis elegans Hypothetical
protein F53F8.3 protein.
Length = 209
Score = 31.5 bits (68), Expect = 0.62
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSR-KCAMCR 610
P L CGH C CV+ + Q KC CR
Sbjct: 158 PRVLGCGHTMCMGCVQKIVGQGYIKCPFCR 187
>U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w)
trna synthetaseprotein 2, isoform a protein.
Length = 650
Score = 31.1 bits (67), Expect = 0.82
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 8/40 (20%)
Frame = -2
Query: 699 HPTKLSCGHVFCFLCVK--------GVAHQSRKCAMCRTE 604
+P+ L CGH+FC+ C++ + S +C CR E
Sbjct: 263 NPSALFCGHLFCWTCIQEHAVAATSSASTSSARCPQCRLE 302
>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSRKCA---MCRTEIPLDYFENPVLL 568
P L CGHV C C + +Q++ C T P +Y N LL
Sbjct: 29 PVSLICGHVICRKCAEKPENQTKPCPHDDWKTTHSPSEYPNNVALL 74
>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSRKCA---MCRTEIPLDYFENPVLL 568
P L CGHV C C + +Q++ C T P +Y N LL
Sbjct: 29 PVSLICGHVICRKCAEKPENQTKPCPHDDWKTTHSPSEYPNNVALL 74
>U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical
protein C28G1.6 protein.
Length = 295
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCV-KGVAHQSRKCAMCRTEI 601
P L+CGHV C +C K + KC CR I
Sbjct: 20 PKNLNCGHVICPVCASKLFENPEVKCPTCRQPI 52
>AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical
protein Y38F1A.2 protein.
Length = 283
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Frame = -2
Query: 714 LQKCXHPTKLSCGHVFCFLCVKGVAHQSR------KCAMCRT 607
L P CGH+FC C+ QS+ CAMCR+
Sbjct: 109 LANASFPVLTDCGHIFCCECIIQYWQQSKAIVTPCDCAMCRS 150
>AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical
protein B0281.8 protein.
Length = 292
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -2
Query: 699 HPTKLSCGHVFCFLCVKGVAHQSR-KCAMCR--TEIPL 595
+P L C H C C+K + R C CR TE+P+
Sbjct: 22 NPRNLKCSHTLCEGCIKKLLKNGRVVCPFCREPTEVPV 59
>AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical
protein B0281.3 protein.
Length = 331
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSR-KCAMCR--TEIP 598
P L C H C C+K + + SR C CR TE+P
Sbjct: 52 PRNLKCCHTLCEGCIKKLLNYSRIVCPFCREPTEVP 87
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 684 SCGHVFCFLCVKGVAHQSRKCAMCRTEI 601
+CGH FC+ C+ C MCR +
Sbjct: 53 NCGHTFCYSCLFDWLKSQDTCPMCREAV 80
>AC017117-2|AAF16617.1| 295|Caenorhabditis elegans Hypothetical
protein F43C11.7 protein.
Length = 295
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 699 HPTKLSCGHVFCFLC-VKGVAHQSRKCAMCRTEIPLDYFEN 580
HP L+CGH C C K V++ C CR L EN
Sbjct: 21 HPKNLTCGHSICKACSSKLVSNFKILCPFCRKTTELRENEN 61
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 690 KLSCGHVFCFLCVKGVAHQSRKCAMCRTEI 601
KL C HVF C+ +++C MCR EI
Sbjct: 448 KLRCNHVFHPECIYKWLDINKRCPMCREEI 477
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -2
Query: 681 CGHVFCFLCVKGVAHQSRKCAMCRTEIPLDYFENPVLLD 565
CGH++ C+ R+C CR +P + F + D
Sbjct: 31 CGHIYHHGCISQWIATKRQCPSCRRTVPKNGFVEKLFFD 69
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -2
Query: 681 CGHVFCFLCVKGVAHQSRK--CAMCRTEI 601
C H FCF C+ QS + C MCR ++
Sbjct: 85 CNHSFCFSCISEWVCQSLRPSCPMCRKDV 113
>Z75710-5|CAB54207.1| 240|Caenorhabditis elegans Hypothetical
protein D1081.9 protein.
Length = 240
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 684 SCGHVFCFLCVKGVAHQSRKCAMCRTEIPLD 592
+CGHVFC C K A + +C +C+ + +D
Sbjct: 22 ACGHVFCQNCTK--AAFNSQCYLCKKPLKVD 50
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Frame = -2
Query: 297 IAGIRTNINQVPIEIKDETEDNVNE------NHDNAET---EIIITDNVQNSNGSEHIL- 148
+ GI N+N +P E DE + +NE D AE E+ + ++ S ++L
Sbjct: 2317 LQGIEDNLNSLPAEESDEIREKLNELRRRKQESDQAEALLQELSVISDMPISTLDLNMLQ 2376
Query: 147 --NQNVSSVQSEDIDDVVSRISTLDLNNADSN 58
N++S+ +E+ D + +I+ L +S+
Sbjct: 2377 GVEDNLNSLPTEEADKIREKINDLRRRKQESD 2408
>U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger
protein protein 1 protein.
Length = 381
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Frame = -2
Query: 687 LSCGHVFCFLCVKGVAHQSR----KCAMCRTE 604
L CGH FC C++ V + +C CR E
Sbjct: 39 LHCGHTFCTECIRNVQNYGNSPHLECPTCRAE 70
>U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical
protein C24A3.1 protein.
Length = 638
Score = 29.5 bits (63), Expect = 2.5
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Frame = -2
Query: 285 RTNINQVPIEIKDETEDNVNENHDNAETEIIITDNV-QNSNGSEHILNQNVSS-VQSEDI 112
RT + ++ + +N D A E + QN + + L N SS VQS D
Sbjct: 85 RTGDDAALSRLQSQLAQMQQQNRDLATAEKAARKRLEQNQDALQRRLQNNESSGVQSRDF 144
Query: 111 DDVVSRISTLD----LNNADSNGLIDES*MKISKL-HLSN 7
DD+ +++ +D + N D +GL + +++ L H++N
Sbjct: 145 DDIRRQMNGVDAKLMIMNNDISGLRNSMDRQVTDLMHINN 184
>U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical
protein C06A5.8a protein.
Length = 283
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Frame = -2
Query: 687 LSCGHVFCFLCVKGVAHQSR----KCAMCRTEIPLD 592
L CGH FC C+K + +C CR E D
Sbjct: 55 LHCGHTFCTECIKTMQKYGNSAYLECPSCRAETKCD 90
>AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical
protein F40G9.12 protein.
Length = 230
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVA 640
P LSCGH +C +C++ +A
Sbjct: 34 PRVLSCGHTYCEICIQELA 52
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSRK--CAMCRT 607
P +C H+FC C+ + RK C +CR+
Sbjct: 31 PILSTCFHIFCRSCINACFERKRKVQCPICRS 62
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSRKCAMCR 610
P L C H FC C+ +RKC C+
Sbjct: 110 PHTLRCQHSFCKKCIDQCLPLTRKCPSCQ 138
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 687 LSCGHVFCFLCVKGVAH-QSRKCAMCRTEIPLDYF 586
L C H+FC C+K + + RKC C + + F
Sbjct: 795 LKCYHLFCETCIKTMYDTRQRKCPKCNSNFGANDF 829
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 687 LSCGHVFCFLCVKGVAH-QSRKCAMCRTEIPLDYF 586
L C H+FC C+K + + RKC C + + F
Sbjct: 798 LKCYHLFCETCIKTMYDTRQRKCPKCNSNFGANDF 832
>AC025724-2|AAG23378.2| 167|Caenorhabditis elegans Hypothetical
protein Y67D8C.4 protein.
Length = 167
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 172 ILHIICYYNFSFCIIMIFVDIIFSFIFYF 258
+ +I+C +FS C+ F IFS+ F F
Sbjct: 120 LAYIVCVLHFSGCLSHFFKQFIFSWFFAF 148
>Z92831-5|CAJ58498.1| 247|Caenorhabditis elegans Hypothetical
protein F22G12.8 protein.
Length = 247
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = -2
Query: 297 IAGIRTNINQVPIEIKDETEDNVNENHDNAETEIIITDNVQNSNGSEHILNQNVSSVQSE 118
I +R ++ P ++ E + + + T+ + SNG E I+N+ + +
Sbjct: 41 IESMRDKTSKKPASNRNHEEIGLAFLKSELDNLVETTEGIMKSNGIELIINKEIDQTKIR 100
Query: 117 DIDDVVSRISTLDLNN-ADSNGLIDES*MKISKLHLSNGS 1
+I +SR+ ++LN A++ G I +KI K++L S
Sbjct: 101 EI--ALSRMK-IELNTLAEAAGAI----LKIRKINLIEDS 133
>Z83218-7|CAB05685.2| 283|Caenorhabditis elegans Hypothetical
protein C31A11.3 protein.
Length = 283
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 181 IICYYNFSFCIIMIFVDIIFSFIFYFNWHLINICSYTGYSFG 306
I +Y FS CI +++ I +F+ Y ++ + SFG
Sbjct: 51 IDAFYTFSICISRVYIPITMTFVDYIIKNMSFYLFWASTSFG 92
>Z49911-3|CAA90126.2| 735|Caenorhabditis elegans Hypothetical
protein M28.4 protein.
Length = 735
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2
Query: 150 LNQNVSSVQSEDIDDVVSRISTLDLNNADSNGLIDES 40
LN VS+ S +DD S + +D+N+ D +G D++
Sbjct: 210 LNSFVSNYTSTVVDDTESGVGIVDVNDFDLSGYRDQN 246
>AF098987-7|AAC67430.1| 310|Caenorhabditis elegans Forkhead
transcription factor familyprotein 8 protein.
Length = 310
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 519 FQWYYEGRNGWWKYDERSNSELENAFNNGE 430
FQ+Y E RN WK R N L F+ E
Sbjct: 90 FQFYRENRNSSWKNSIRHNLSLNKQFSRIE 119
>AF016683-9|AAB66197.1| 299|Caenorhabditis elegans Hypothetical
protein K09F6.7 protein.
Length = 299
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSR-KCAMCR--TEIPLDYFEN 580
P L C H C C+K + S+ C CR T++P + E+
Sbjct: 22 PRNLKCSHTLCEGCIKKMLGNSKIVCPFCREPTDMPGNKMES 63
>Z50070-8|CAA90397.1| 263|Caenorhabditis elegans Hypothetical
protein F43G6.8 protein.
Length = 263
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGV-AHQSRKCAMCRT 607
P L CGH C C++ + +C CRT
Sbjct: 214 PRVLVCGHTLCTSCIEKLDVGDGIRCPFCRT 244
>AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical
protein C45G7.4 protein.
Length = 603
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 7/38 (18%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVA-HQ------SRKCAMCRTE 604
P L CGH FC C+ + HQ S KC CR E
Sbjct: 38 PKLLPCGHNFCESCIFSLCLHQEYYLLDSIKCPTCRRE 75
>AF039047-9|AAB94228.1| 303|Caenorhabditis elegans Hypothetical
protein K11D12.8 protein.
Length = 303
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 163 SITILHIICYYNFSFCIIMIFVDIIFSFIFYFNW 264
SI +L + + ++C+ +I I+++ FYF W
Sbjct: 261 SILLLQGVSIFLNNYCLSLIITCILYNNTFYFKW 294
>AC026301-1|AAK68897.1| 280|Caenorhabditis elegans Hypothetical
protein Y54F10BM.6 protein.
Length = 280
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -2
Query: 696 PTKLSCGHVFCFLCVKGVAHQSRKCAMC 613
P ++CGH +C C++ A Q +C
Sbjct: 80 PRVMNCGHTYCGSCIEIFAEQKDGMVIC 107
>AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical
protein Y53G8AL.1 protein.
Length = 704
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/90 (20%), Positives = 45/90 (50%)
Frame = -2
Query: 276 INQVPIEIKDETEDNVNENHDNAETEIIITDNVQNSNGSEHILNQNVSSVQSEDIDDVVS 97
I+ +E ++ETE+ V+E + AE + + + +NS + +N + ++ + V
Sbjct: 495 ISDFLVENQEETEEKVSEAAEKAENPMKLAEIDENSENLDISAAENAENAENH-VTAVAE 553
Query: 96 RISTLDLNNADSNGLIDES*MKISKLHLSN 7
++ + ++ N ++ +ISK+ S+
Sbjct: 554 SENSENFSSESENPAENDENPEISKIMTSS 583
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,904,006
Number of Sequences: 27780
Number of extensions: 303366
Number of successful extensions: 1249
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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