Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18g18
(690 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF169559-1|AAF06739.1| 387|Homo sapiens beta-ureidopropionase p... 284 2e-76
CR456375-1|CAG30261.1| 384|Homo sapiens Em:AP000355.2 protein. 283 3e-76
BC139843-1|AAI39844.2| 389|Homo sapiens UPB1 protein protein. 283 3e-76
BC131703-1|AAI31704.1| 384|Homo sapiens UPB1 protein protein. 283 3e-76
AF163312-1|AAF06735.1| 384|Homo sapiens beta-ureidopropionase p... 283 3e-76
AB013885-1|BAA88634.1| 384|Homo sapiens beta-ureidopropionase p... 283 3e-76
CR541846-1|CAG46644.1| 327|Homo sapiens NIT1 protein. 57 7e-08
CR541814-1|CAG46613.1| 327|Homo sapiens NIT1 protein. 57 7e-08
AL591806-16|CAI15379.1| 327|Homo sapiens nitrilase 1 protein. 57 7e-08
AF069987-1|AAC39907.1| 327|Homo sapiens nitrilase 1 protein. 57 7e-08
AF069984-1|AAC39901.1| 327|Homo sapiens nitrilase homolog 1 pro... 57 7e-08
BC046149-1|AAH46149.1| 243|Homo sapiens NIT1 protein protein. 41 0.005
AL591806-17|CAI15380.1| 243|Homo sapiens nitrilase 1 protein. 41 0.005
X53468-2|CAA37563.1| 278|Homo sapiens protein ( Human oct-2 mRN... 30 8.9
M36653-2|AAA36390.1| 278|Homo sapiens protein ( Human Oct-2 fac... 30 8.9
AJ406937-1|CAC27576.1| 186|Homo sapiens keratin associated prot... 30 8.9
>AF169559-1|AAF06739.1| 387|Homo sapiens beta-ureidopropionase
protein.
Length = 387
Score = 284 bits (696), Expect = 2e-76
Identities = 131/206 (63%), Positives = 157/206 (76%), Gaps = 1/206 (0%)
Frame = -3
Query: 688 VVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGRHHVLN 509
VVIS++G V+GK RKNHIPRVGDFNES YYMEGN GHPVF T++G+IAVNIC+GRHH LN
Sbjct: 182 VVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLN 241
Query: 508 WMMFGQNGAEIVFNPSATIAG-EGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEF 332
W+M+ NGAEI+FNPSATI SE +W +EARNAAI N FT AINRVG E FPNEF
Sbjct: 242 WLMYSINGAEIIFNPSATIGALRSLSESLWPIEARNAAIANHCFTCAINRVGTEHFPNEF 301
Query: 331 TSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCYYM 152
TS DGK AH+D G FYGSSY PD R PGLSR+RDGLL+A +DLNL +Q+ D + M
Sbjct: 302 TSGDGKKAHQDFGYFYGSSYVAAPDSSRTPGLSRSRDGLLVAKLDLNLCQQVNDVWNFKM 361
Query: 151 TQRLDMYVNSLSKVLELDYKPQVVHE 74
T R +MY L++ ++ +Y P +V E
Sbjct: 362 TGRYEMYARELAEAVKSNYSPTIVKE 387
>CR456375-1|CAG30261.1| 384|Homo sapiens Em:AP000355.2 protein.
Length = 384
Score = 283 bits (695), Expect = 3e-76
Identities = 131/205 (63%), Positives = 157/205 (76%)
Frame = -3
Query: 688 VVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGRHHVLN 509
VVIS++G V+GK RKNHIPRVGDFNES YYMEGN GHPVF T++G+IAVNIC+GRHH LN
Sbjct: 182 VVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLN 241
Query: 508 WMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFT 329
W+M+ NGAEI+FNPSATI SE +W +EARNAAI N FT AINRVG E FPNEFT
Sbjct: 242 WLMYSINGAEIIFNPSATIGAL--SESLWPIEARNAAIANHCFTCAINRVGTEHFPNEFT 299
Query: 328 SADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCYYMT 149
S DGK AH+D G FYGSSY PD R PGLSR+RDGLL+A +DLNL +Q+ D + MT
Sbjct: 300 SGDGKKAHQDFGYFYGSSYVAAPDSSRTPGLSRSRDGLLVAKLDLNLCQQVNDVWNFKMT 359
Query: 148 QRLDMYVNSLSKVLELDYKPQVVHE 74
R +MY L++ ++ +Y P +V E
Sbjct: 360 GRYEMYARELAEAVKSNYSPTIVKE 384
>BC139843-1|AAI39844.2| 389|Homo sapiens UPB1 protein protein.
Length = 389
Score = 283 bits (695), Expect = 3e-76
Identities = 131/205 (63%), Positives = 157/205 (76%)
Frame = -3
Query: 688 VVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGRHHVLN 509
VVIS++G V+GK RKNHIPRVGDFNES YYMEGN GHPVF T++G+IAVNIC+GRHH LN
Sbjct: 182 VVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLN 241
Query: 508 WMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFT 329
W+M+ NGAEI+FNPSATI SE +W +EARNAAI N FT AINRVG E FPNEFT
Sbjct: 242 WLMYSINGAEIIFNPSATIGAL--SESLWPIEARNAAIANHCFTCAINRVGTEHFPNEFT 299
Query: 328 SADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCYYMT 149
S DGK AH+D G FYGSSY PD R PGLSR+RDGLL+A +DLNL +Q+ D + MT
Sbjct: 300 SGDGKKAHQDFGYFYGSSYVAAPDSSRTPGLSRSRDGLLVAKLDLNLCQQVNDVWNFKMT 359
Query: 148 QRLDMYVNSLSKVLELDYKPQVVHE 74
R +MY L++ ++ +Y P +V E
Sbjct: 360 GRYEMYARELAEAVKSNYSPTIVKE 384
>BC131703-1|AAI31704.1| 384|Homo sapiens UPB1 protein protein.
Length = 384
Score = 283 bits (695), Expect = 3e-76
Identities = 131/205 (63%), Positives = 157/205 (76%)
Frame = -3
Query: 688 VVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGRHHVLN 509
VVIS++G V+GK RKNHIPRVGDFNES YYMEGN GHPVF T++G+IAVNIC+GRHH LN
Sbjct: 182 VVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLN 241
Query: 508 WMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFT 329
W+M+ NGAEI+FNPSATI SE +W +EARNAAI N FT AINRVG E FPNEFT
Sbjct: 242 WLMYSINGAEIIFNPSATIGAL--SESLWPIEARNAAIANHCFTCAINRVGTEHFPNEFT 299
Query: 328 SADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCYYMT 149
S DGK AH+D G FYGSSY PD R PGLSR+RDGLL+A +DLNL +Q+ D + MT
Sbjct: 300 SGDGKKAHQDFGYFYGSSYVAAPDSSRTPGLSRSRDGLLVAKLDLNLCQQVNDVWNFKMT 359
Query: 148 QRLDMYVNSLSKVLELDYKPQVVHE 74
R +MY L++ ++ +Y P +V E
Sbjct: 360 GRYEMYARELAEAVKSNYSPTIVKE 384
>AF163312-1|AAF06735.1| 384|Homo sapiens beta-ureidopropionase
protein.
Length = 384
Score = 283 bits (695), Expect = 3e-76
Identities = 131/205 (63%), Positives = 157/205 (76%)
Frame = -3
Query: 688 VVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGRHHVLN 509
VVIS++G V+GK RKNHIPRVGDFNES YYMEGN GHPVF T++G+IAVNIC+GRHH LN
Sbjct: 182 VVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLN 241
Query: 508 WMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFT 329
W+M+ NGAEI+FNPSATI SE +W +EARNAAI N FT AINRVG E FPNEFT
Sbjct: 242 WLMYSINGAEIIFNPSATIGAL--SESLWPIEARNAAIANHCFTCAINRVGTEHFPNEFT 299
Query: 328 SADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCYYMT 149
S DGK AH+D G FYGSSY PD R PGLSR+RDGLL+A +DLNL +Q+ D + MT
Sbjct: 300 SGDGKKAHQDFGYFYGSSYVAAPDSSRTPGLSRSRDGLLVAKLDLNLCQQVNDVWNFKMT 359
Query: 148 QRLDMYVNSLSKVLELDYKPQVVHE 74
R +MY L++ ++ +Y P +V E
Sbjct: 360 GRYEMYARELAEAVKSNYSPTIVKE 384
>AB013885-1|BAA88634.1| 384|Homo sapiens beta-ureidopropionase
protein.
Length = 384
Score = 283 bits (695), Expect = 3e-76
Identities = 131/205 (63%), Positives = 157/205 (76%)
Frame = -3
Query: 688 VVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGRHHVLN 509
VVIS++G V+GK RKNHIPRVGDFNES YYMEGN GHPVF T++G+IAVNIC+GRHH LN
Sbjct: 182 VVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLN 241
Query: 508 WMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFT 329
W+M+ NGAEI+FNPSATI SE +W +EARNAAI N FT AINRVG E FPNEFT
Sbjct: 242 WLMYSINGAEIIFNPSATIGAL--SESLWPIEARNAAIANHCFTCAINRVGTEHFPNEFT 299
Query: 328 SADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCYYMT 149
S DGK AH+D G FYGSSY PD R PGLSR+RDGLL+A +DLNL +Q+ D + MT
Sbjct: 300 SGDGKKAHQDFGYFYGSSYVAAPDSSRTPGLSRSRDGLLVAKLDLNLCQQVNDVWNFKMT 359
Query: 148 QRLDMYVNSLSKVLELDYKPQVVHE 74
R +MY L++ ++ +Y P +V E
Sbjct: 360 GRYEMYARELAEAVKSNYSPTIVKE 384
>CR541846-1|CAG46644.1| 327|Homo sapiens NIT1 protein.
Length = 327
Score = 56.8 bits (131), Expect = 7e-08
Identities = 59/194 (30%), Positives = 82/194 (42%), Gaps = 6/194 (3%)
Frame = -3
Query: 688 VVISDTGNVIGKHRKNH-----IPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGR 524
V+++ G V+ +RK H IP G ESN M G + +T GKI + +C+
Sbjct: 147 VLLNSKGAVVATYRKTHLCDVEIPGQGPMCESNSTMPGPSLESPVSTPAGKIGLAVCYDM 206
Query: 523 HHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAI-TNCYFTAAINRVGYEE 347
+ Q GAEI+ PSA + G + W V R AI T CY AA
Sbjct: 207 RFPELSLALAQAGAEILTYPSAFGSITGPAH--WEVLLRARAIETQCYVVAA-------- 256
Query: 346 FPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDR 167
+ G+ H + YG S P G S GL +A +DLN RQ+R
Sbjct: 257 ------AQCGR--HHEKRASYGHSMVVDPWGTVVARCSE-GPGLCLARIDLNYLRQLRRH 307
Query: 166 RCYYMTQRLDMYVN 125
+ +R D+Y N
Sbjct: 308 LPVFQHRRPDLYGN 321
>CR541814-1|CAG46613.1| 327|Homo sapiens NIT1 protein.
Length = 327
Score = 56.8 bits (131), Expect = 7e-08
Identities = 59/194 (30%), Positives = 82/194 (42%), Gaps = 6/194 (3%)
Frame = -3
Query: 688 VVISDTGNVIGKHRKNH-----IPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGR 524
V+++ G V+ +RK H IP G ESN M G + +T GKI + +C+
Sbjct: 147 VLLNSKGAVVATYRKTHLCDVEIPGQGPMCESNSTMPGPSLESPVSTPAGKIGLAVCYDM 206
Query: 523 HHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAI-TNCYFTAAINRVGYEE 347
+ Q GAEI+ PSA + G + W V R AI T CY AA
Sbjct: 207 RFPELSLALAQAGAEILTYPSAFGSITGPAH--WEVLLRARAIETQCYVVAA-------- 256
Query: 346 FPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDR 167
+ G+ H + YG S P G S GL +A +DLN RQ+R
Sbjct: 257 ------AQCGR--HHEKRASYGHSMVVDPWGTVVARCSE-GPGLCLARIDLNYLRQLRRH 307
Query: 166 RCYYMTQRLDMYVN 125
+ +R D+Y N
Sbjct: 308 LPVFQHRRPDLYGN 321
>AL591806-16|CAI15379.1| 327|Homo sapiens nitrilase 1 protein.
Length = 327
Score = 56.8 bits (131), Expect = 7e-08
Identities = 59/194 (30%), Positives = 82/194 (42%), Gaps = 6/194 (3%)
Frame = -3
Query: 688 VVISDTGNVIGKHRKNH-----IPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGR 524
V+++ G V+ +RK H IP G ESN M G + +T GKI + +C+
Sbjct: 147 VLLNSKGAVVATYRKTHLCDVEIPGQGPMCESNSTMPGPSLESPVSTPAGKIGLAVCYDM 206
Query: 523 HHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAI-TNCYFTAAINRVGYEE 347
+ Q GAEI+ PSA + G + W V R AI T CY AA
Sbjct: 207 RFPELSLALAQAGAEILTYPSAFGSITGPAH--WEVLLRARAIETQCYVVAA-------- 256
Query: 346 FPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDR 167
+ G+ H + YG S P G S GL +A +DLN RQ+R
Sbjct: 257 ------AQCGR--HHEKRASYGHSMVVDPWGTVVARCSE-GPGLCLARIDLNYLRQLRRH 307
Query: 166 RCYYMTQRLDMYVN 125
+ +R D+Y N
Sbjct: 308 LPVFQHRRPDLYGN 321
>AF069987-1|AAC39907.1| 327|Homo sapiens nitrilase 1 protein.
Length = 327
Score = 56.8 bits (131), Expect = 7e-08
Identities = 59/194 (30%), Positives = 82/194 (42%), Gaps = 6/194 (3%)
Frame = -3
Query: 688 VVISDTGNVIGKHRKNH-----IPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGR 524
V+++ G V+ +RK H IP G ESN M G + +T GKI + +C+
Sbjct: 147 VLLNSKGAVVATYRKTHLCDVEIPGQGPMCESNSTMPGPSLESPVSTPAGKIGLAVCYDM 206
Query: 523 HHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAI-TNCYFTAAINRVGYEE 347
+ Q GAEI+ PSA + G + W V R AI T CY AA
Sbjct: 207 RFPELSLALAQAGAEILTYPSAFGSITGPAH--WEVLLRARAIETQCYVVAA-------- 256
Query: 346 FPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDR 167
+ G+ H + YG S P G S GL +A +DLN RQ+R
Sbjct: 257 ------AQCGR--HHEKRASYGHSMVVDPWGTVVARCSE-GPGLCLARIDLNYLRQLRRH 307
Query: 166 RCYYMTQRLDMYVN 125
+ +R D+Y N
Sbjct: 308 LPVFQHRRPDLYGN 321
>AF069984-1|AAC39901.1| 327|Homo sapiens nitrilase homolog 1
protein.
Length = 327
Score = 56.8 bits (131), Expect = 7e-08
Identities = 59/194 (30%), Positives = 82/194 (42%), Gaps = 6/194 (3%)
Frame = -3
Query: 688 VVISDTGNVIGKHRKNH-----IPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGR 524
V+++ G V+ +RK H IP G ESN M G + +T GKI + +C+
Sbjct: 147 VLLNSKGAVVATYRKTHLCDVEIPGQGPMCESNSTMPGPSLESPVSTPAGKIGLAVCYDM 206
Query: 523 HHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAI-TNCYFTAAINRVGYEE 347
+ Q GAEI+ PSA + G + W V R AI T CY AA
Sbjct: 207 RFPELSLALAQAGAEILTYPSAFGSITGPAH--WEVLLRARAIETQCYVVAA-------- 256
Query: 346 FPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDR 167
+ G+ H + YG S P G S GL +A +DLN RQ+R
Sbjct: 257 ------AQCGR--HHEKRASYGHSMVVDPWGTVVARCSE-GPGLCLARIDLNYLRQLRRH 307
Query: 166 RCYYMTQRLDMYVN 125
+ +R D+Y N
Sbjct: 308 LPVFQHRRPDLYGN 321
>BC046149-1|AAH46149.1| 243|Homo sapiens NIT1 protein protein.
Length = 243
Score = 40.7 bits (91), Expect = 0.005
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = -3
Query: 688 VVISDTGNVIGKHRKNH-----IPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGR 524
V+++ G V+ +RK H IP G ESN M G + +T GKI + +C+
Sbjct: 147 VLLNSKGAVVATYRKTHLCDVEIPGQGPMCESNSTMPGPSLESPVSTPAGKIGLAVCYDM 206
Query: 523 HHVLNWMMFGQNGAEIVFNPSA 458
+ Q GAEI+ PSA
Sbjct: 207 RFPELSLALAQAGAEILTYPSA 228
>AL591806-17|CAI15380.1| 243|Homo sapiens nitrilase 1 protein.
Length = 243
Score = 40.7 bits (91), Expect = 0.005
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = -3
Query: 688 VVISDTGNVIGKHRKNH-----IPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGR 524
V+++ G V+ +RK H IP G ESN M G + +T GKI + +C+
Sbjct: 147 VLLNSKGAVVATYRKTHLCDVEIPGQGPMCESNSTMPGPSLESPVSTPAGKIGLAVCYDM 206
Query: 523 HHVLNWMMFGQNGAEIVFNPSA 458
+ Q GAEI+ PSA
Sbjct: 207 RFPELSLALAQAGAEILTYPSA 228
>X53468-2|CAA37563.1| 278|Homo sapiens protein ( Human oct-2 mRNA
for B-cell specific transcription factor NF-A2. ).
Length = 278
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2
Query: 209 RGRGLEPEQTDQRQTLLLHDPTPGHVREQSQQSTRAGL 96
RGRG P Q L H PTPGH ++ Q +R L
Sbjct: 199 RGRGCAPPQFHP----LCHSPTPGHHQQHKPQPSRQPL 232
>M36653-2|AAA36390.1| 278|Homo sapiens protein ( Human Oct-2 factor
mRNA, complete cds. ).
Length = 278
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2
Query: 209 RGRGLEPEQTDQRQTLLLHDPTPGHVREQSQQSTRAGL 96
RGRG P Q L H PTPGH ++ Q +R L
Sbjct: 199 RGRGCAPPQFHP----LCHSPTPGHHQQHKPQPSRQPL 232
>AJ406937-1|CAC27576.1| 186|Homo sapiens keratin associated protein
4.5 protein.
Length = 186
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +1
Query: 82 RPAACNPARVLC*DCSRTCPGVGSCNNNVCL*SVCSGSSPRPRLTSRLWC 231
RP C P+ C C TC C C S C S RP+ + C
Sbjct: 77 RPCCCRPS---C--CQTTCCRTTCCRTTCCCPSCCVSSCCRPQCCQSVCC 121
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,968,456
Number of Sequences: 237096
Number of extensions: 2084721
Number of successful extensions: 5688
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5671
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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