Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18g02
(643 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U48394-1|AAB61633.1| 228|Drosophila melanogaster M(1)15D protein. 314 9e-86
AY075368-1|AAL68215.1| 228|Drosophila melanogaster GM13047p pro... 314 9e-86
AE014298-2526|AAF48700.1| 228|Drosophila melanogaster CG8922-PA... 314 9e-86
AY071138-1|AAL48760.1| 230|Drosophila melanogaster RE17836p pro... 306 2e-83
AE014297-1922|AAF55116.1| 230|Drosophila melanogaster CG7014-PA... 306 2e-83
L20297-1|AAA28860.1| 685|Drosophila melanogaster neurotrophic r... 29 4.1
AE014134-1796|AAF52885.1| 685|Drosophila melanogaster CG4926-PA... 29 4.1
>U48394-1|AAB61633.1| 228|Drosophila melanogaster M(1)15D protein.
Length = 228
Score = 314 bits (770), Expect = 9e-86
Identities = 154/188 (81%), Positives = 166/188 (88%)
Frame = -3
Query: 638 AEAGXVVVXTMSXPQAADIXEIKLFGRWSXYDVQVXDMSLQDYISVKEKYAKYLPHSAGR 459
AE ++ T + ++ EIKLFGRWS DV V D+SLQDYISVKEK+A+YLPHSAGR
Sbjct: 21 AEVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGR 79
Query: 458 YAHKRFRKAQCPIVERLTNSXMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 279
YA KRFRKAQCPIVERLT S MM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+A
Sbjct: 80 YAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSA 139
Query: 278 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLXTGAREAAFRNIKTIAECVAD 99
IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLL TGAREAAFRNIKTIAEC+AD
Sbjct: 140 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLAD 199
Query: 98 ELINAAKG 75
ELINAAKG
Sbjct: 200 ELINAAKG 207
Score = 37.5 bits (83), Expect = 0.015
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -1
Query: 79 KGSSNSYAIKKKDRDWKRVAKSN 11
KGSSNSYAIKKKD + +RVAKSN
Sbjct: 206 KGSSNSYAIKKKD-ELERVAKSN 227
>AY075368-1|AAL68215.1| 228|Drosophila melanogaster GM13047p
protein.
Length = 228
Score = 314 bits (770), Expect = 9e-86
Identities = 154/188 (81%), Positives = 166/188 (88%)
Frame = -3
Query: 638 AEAGXVVVXTMSXPQAADIXEIKLFGRWSXYDVQVXDMSLQDYISVKEKYAKYLPHSAGR 459
AE ++ T + ++ EIKLFGRWS DV V D+SLQDYISVKEK+A+YLPHSAGR
Sbjct: 21 AEVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGR 79
Query: 458 YAHKRFRKAQCPIVERLTNSXMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 279
YA KRFRKAQCPIVERLT S MM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+A
Sbjct: 80 YAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSA 139
Query: 278 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLXTGAREAAFRNIKTIAECVAD 99
IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLL TGAREAAFRNIKTIAEC+AD
Sbjct: 140 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLAD 199
Query: 98 ELINAAKG 75
ELINAAKG
Sbjct: 200 ELINAAKG 207
Score = 37.5 bits (83), Expect = 0.015
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -1
Query: 79 KGSSNSYAIKKKDRDWKRVAKSN 11
KGSSNSYAIKKKD + +RVAKSN
Sbjct: 206 KGSSNSYAIKKKD-ELERVAKSN 227
>AE014298-2526|AAF48700.1| 228|Drosophila melanogaster CG8922-PA
protein.
Length = 228
Score = 314 bits (770), Expect = 9e-86
Identities = 154/188 (81%), Positives = 166/188 (88%)
Frame = -3
Query: 638 AEAGXVVVXTMSXPQAADIXEIKLFGRWSXYDVQVXDMSLQDYISVKEKYAKYLPHSAGR 459
AE ++ T + ++ EIKLFGRWS DV V D+SLQDYISVKEK+A+YLPHSAGR
Sbjct: 21 AEVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGR 79
Query: 458 YAHKRFRKAQCPIVERLTNSXMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 279
YA KRFRKAQCPIVERLT S MM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+A
Sbjct: 80 YAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSA 139
Query: 278 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLXTGAREAAFRNIKTIAECVAD 99
IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLL TGAREAAFRNIKTIAEC+AD
Sbjct: 140 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLAD 199
Query: 98 ELINAAKG 75
ELINAAKG
Sbjct: 200 ELINAAKG 207
Score = 37.5 bits (83), Expect = 0.015
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -1
Query: 79 KGSSNSYAIKKKDRDWKRVAKSN 11
KGSSNSYAIKKKD + +RVAKSN
Sbjct: 206 KGSSNSYAIKKKD-ELERVAKSN 227
>AY071138-1|AAL48760.1| 230|Drosophila melanogaster RE17836p
protein.
Length = 230
Score = 306 bits (751), Expect = 2e-83
Identities = 145/182 (79%), Positives = 161/182 (88%)
Frame = -3
Query: 620 VVXTMSXPQAADIXEIKLFGRWSXYDVQVXDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 441
VV TM + + EIKLFGRW+ D+ + D+SLQDYI+VKEK+A+YLPHSAGRYA KRF
Sbjct: 28 VVTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFARYLPHSAGRYAAKRF 87
Query: 440 RKAQCPIVERLTNSXMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 261
RKAQCPIVERLT+ MM GR+NGKKL+A RIVKHAFEIIHLLT ENPLQV V AI+NSGP
Sbjct: 88 RKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSENPLQVTVNAIVNSGP 147
Query: 260 REDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLXTGAREAAFRNIKTIAECVADELINAA 81
REDSTRIGRAGTVRRQAVDVSPLRRVNQAIWL+ TGAREAAFRNIKT+AEC+ADELINAA
Sbjct: 148 REDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIKTVAECLADELINAA 207
Query: 80 KG 75
KG
Sbjct: 208 KG 209
Score = 37.5 bits (83), Expect = 0.015
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -1
Query: 79 KGSSNSYAIKKKDRDWKRVAKSN 11
KGSSNSYAIKKKD + +RVAKSN
Sbjct: 208 KGSSNSYAIKKKD-ELERVAKSN 229
>AE014297-1922|AAF55116.1| 230|Drosophila melanogaster CG7014-PA
protein.
Length = 230
Score = 306 bits (751), Expect = 2e-83
Identities = 145/182 (79%), Positives = 161/182 (88%)
Frame = -3
Query: 620 VVXTMSXPQAADIXEIKLFGRWSXYDVQVXDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 441
VV TM + + EIKLFGRW+ D+ + D+SLQDYI+VKEK+A+YLPHSAGRYA KRF
Sbjct: 28 VVTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFARYLPHSAGRYAAKRF 87
Query: 440 RKAQCPIVERLTNSXMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 261
RKAQCPIVERLT+ MM GR+NGKKL+A RIVKHAFEIIHLLT ENPLQV V AI+NSGP
Sbjct: 88 RKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSENPLQVTVNAIVNSGP 147
Query: 260 REDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLXTGAREAAFRNIKTIAECVADELINAA 81
REDSTRIGRAGTVRRQAVDVSPLRRVNQAIWL+ TGAREAAFRNIKT+AEC+ADELINAA
Sbjct: 148 REDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIKTVAECLADELINAA 207
Query: 80 KG 75
KG
Sbjct: 208 KG 209
Score = 37.5 bits (83), Expect = 0.015
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -1
Query: 79 KGSSNSYAIKKKDRDWKRVAKSN 11
KGSSNSYAIKKKD + +RVAKSN
Sbjct: 208 KGSSNSYAIKKKD-ELERVAKSN 229
>L20297-1|AAA28860.1| 685|Drosophila melanogaster neurotrophic
receptor protein.
Length = 685
Score = 29.5 bits (63), Expect = 4.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 480 IFCVLLFNGNVVLQRHIXDLHIVXTPSAEKLDFXN 584
IF ++LF ++ + ++H + TPSA+K + N
Sbjct: 332 IFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGN 366
>AE014134-1796|AAF52885.1| 685|Drosophila melanogaster CG4926-PA
protein.
Length = 685
Score = 29.5 bits (63), Expect = 4.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 480 IFCVLLFNGNVVLQRHIXDLHIVXTPSAEKLDFXN 584
IF ++LF ++ + ++H + TPSA+K + N
Sbjct: 332 IFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGN 366
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,023,561
Number of Sequences: 53049
Number of extensions: 556625
Number of successful extensions: 1163
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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