Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18g01
(767 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094892-1|AAM11245.1| 196|Drosophila melanogaster RE67638p pro... 254 1e-67
AE014297-1856|AAF55063.1| 196|Drosophila melanogaster CG3351-PA... 254 1e-67
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE... 31 2.3
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro... 30 4.0
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC... 30 4.0
AY051831-1|AAK93255.1| 703|Drosophila melanogaster LD33749p pro... 29 7.0
BT016108-1|AAV36993.1| 731|Drosophila melanogaster LD15123p pro... 29 9.3
AE013599-3902|AAF47229.1| 731|Drosophila melanogaster CG11416-P... 29 9.3
>AY094892-1|AAM11245.1| 196|Drosophila melanogaster RE67638p
protein.
Length = 196
Score = 254 bits (621), Expect = 1e-67
Identities = 119/195 (61%), Positives = 149/195 (76%)
Frame = -2
Query: 613 MSKSVARLKSMRKVAEKIDHSSKMRTNIXXXXXXXXXXXXXXXGQRNINIAAFCKDFNEK 434
MSK+ +LKS++K E++ H+SK++TNI GQR INIAAFCKDFN K
Sbjct: 1 MSKAAGKLKSLKKTVERVTHTSKLKTNIPAGMAAAGPPLGPMLGQRAINIAAFCKDFNAK 60
Query: 433 TANIKQGIPLPTRVKVNSDRSYHLVIHQPPASYFLKQAAGISKGAMEPVRETSGKITLKH 254
TA +K+G+PLP R+ VNSDRSY L IH PPA++FLKQAAGI +G M P +E +G ITLKH
Sbjct: 61 TAEMKEGVPLPCRISVNSDRSYDLAIHHPPATFFLKQAAGIQRGTMTPGKEVAGMITLKH 120
Query: 253 LYEIAKIKQQDPPLEWKSLQEICTMLIATARTCGIEIVKELDPKEYGEFLEERKKIVEEQ 74
LYEIA IK QDPP ++Q++C MLI+ ARTCGI++V+E+DP YGEFLEERK IVE+Q
Sbjct: 121 LYEIAAIKIQDPPNVLLTMQQMCEMLISIARTCGIKVVREIDPAAYGEFLEERKLIVEQQ 180
Query: 73 KKMLQEKREAKMLRT 29
++ LQEKREAKMLRT
Sbjct: 181 RRELQEKREAKMLRT 195
>AE014297-1856|AAF55063.1| 196|Drosophila melanogaster CG3351-PA
protein.
Length = 196
Score = 254 bits (621), Expect = 1e-67
Identities = 119/195 (61%), Positives = 149/195 (76%)
Frame = -2
Query: 613 MSKSVARLKSMRKVAEKIDHSSKMRTNIXXXXXXXXXXXXXXXGQRNINIAAFCKDFNEK 434
MSK+ +LKS++K E++ H+SK++TNI GQR INIAAFCKDFN K
Sbjct: 1 MSKAAGKLKSLKKTVERVTHTSKLKTNIPAGMAAAGPPLGPMLGQRAINIAAFCKDFNAK 60
Query: 433 TANIKQGIPLPTRVKVNSDRSYHLVIHQPPASYFLKQAAGISKGAMEPVRETSGKITLKH 254
TA +K+G+PLP R+ VNSDRSY L IH PPA++FLKQAAGI +G M P +E +G ITLKH
Sbjct: 61 TAEMKEGVPLPCRISVNSDRSYDLAIHHPPATFFLKQAAGIQRGTMTPGKEVAGMITLKH 120
Query: 253 LYEIAKIKQQDPPLEWKSLQEICTMLIATARTCGIEIVKELDPKEYGEFLEERKKIVEEQ 74
LYEIA IK QDPP ++Q++C MLI+ ARTCGI++V+E+DP YGEFLEERK IVE+Q
Sbjct: 121 LYEIAAIKIQDPPNVLLTMQQMCEMLISIARTCGIKVVREIDPAAYGEFLEERKLIVEQQ 180
Query: 73 KKMLQEKREAKMLRT 29
++ LQEKREAKMLRT
Sbjct: 181 RRELQEKREAKMLRT 195
>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
isoform E protein.
Length = 9606
Score = 30.7 bits (66), Expect = 2.3
Identities = 28/96 (29%), Positives = 41/96 (42%)
Frame = -2
Query: 331 LKQAAGISKGAMEPVRETSGKITLKHLYEIAKIKQQDPPLEWKSLQEICTMLIATARTCG 152
L + S EPV E LK + KI ++ P +E + + T+ T T
Sbjct: 3166 LDEPMNFSDDEEEPVPEP-----LKEETVVEKIVEEKPIVEVSVVDDSKTITTVTTTTTT 3220
Query: 151 IEIVKELDPKEYGEFLEERKKIVEEQKKMLQEKREA 44
E + EL EE KK+VE +KK + K+ A
Sbjct: 3221 TETISELP------IPEETKKVVEPEKKPEEPKKPA 3250
>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
Length = 16215
Score = 29.9 bits (64), Expect = 4.0
Identities = 11/39 (28%), Positives = 29/39 (74%)
Frame = -2
Query: 148 EIVKELDPKEYGEFLEERKKIVEEQKKMLQEKREAKMLR 32
++ +E P E E ++E +++V+EQ+++++EK++ K ++
Sbjct: 5728 QVTEEETPHE--EIIKESEEVVQEQEEIVEEKKKVKKVK 5764
>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
isoform C protein.
Length = 18074
Score = 29.9 bits (64), Expect = 4.0
Identities = 11/39 (28%), Positives = 29/39 (74%)
Frame = -2
Query: 148 EIVKELDPKEYGEFLEERKKIVEEQKKMLQEKREAKMLR 32
++ +E P E E ++E +++V+EQ+++++EK++ K ++
Sbjct: 5728 QVTEEETPHE--EIIKESEEVVQEQEEIVEEKKKVKKVK 5764
>AY051831-1|AAK93255.1| 703|Drosophila melanogaster LD33749p
protein.
Length = 703
Score = 29.1 bits (62), Expect = 7.0
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = -2
Query: 349 PPASYFLKQA---AGISKGAMEPVRETSGKITLKHLYEIAKIKQQDPPL 212
P F K+A A ++K +E +RE + KIT+ +++E K + PP+
Sbjct: 230 PLTKNFYKEAPEVANLTKSEIERIREENNKITVSYVFE-PKEGETSPPI 277
>BT016108-1|AAV36993.1| 731|Drosophila melanogaster LD15123p
protein.
Length = 731
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/40 (27%), Positives = 28/40 (70%)
Frame = -2
Query: 151 IEIVKELDPKEYGEFLEERKKIVEEQKKMLQEKREAKMLR 32
+EIV++ + + + ++L E +K + +QK+ + +REA+ ++
Sbjct: 128 VEIVEDFNEESHNKWLAEHRKRMRQQKQKERLEREAEPVK 167
>AE013599-3902|AAF47229.1| 731|Drosophila melanogaster CG11416-PA
protein.
Length = 731
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/40 (27%), Positives = 28/40 (70%)
Frame = -2
Query: 151 IEIVKELDPKEYGEFLEERKKIVEEQKKMLQEKREAKMLR 32
+EIV++ + + + ++L E +K + +QK+ + +REA+ ++
Sbjct: 128 VEIVEDFNEESHNKWLAEHRKRMRQQKQKERLEREAEPVK 167
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,991,124
Number of Sequences: 53049
Number of extensions: 603994
Number of successful extensions: 1811
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1808
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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