Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc18f08
         (383 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    30   0.033
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            27   0.31 
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   0.95 
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    25   0.95 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   2.2  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   2.9  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   5.1  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    22   6.7  
AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal...    22   6.7  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          22   8.9  

>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 29.9 bits (64), Expect = 0.033
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = -3

Query: 330 CTGVRISLAGTNFSNEIRTQQMFTIDFHGEGITSCNKNQTRKIIICVITG 181
           C+G  +S      + +   QQ  +I  H EG+    +   RK ++C ITG
Sbjct: 103 CSGYDLS----ELAGQQEPQQALSIVHHPEGVMGPTRRMIRKPLVCAITG 148


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = -1

Query: 128 LP*SSNAFR--FEGWSSRCDYTETLELYLK 45
           LP   N  R  F  WS  CDY    + YLK
Sbjct: 908 LPKQLNDIRLAFNAWSCECDYVTRFQEYLK 937


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 0.95
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -3

Query: 300 TNFSNEIRTQQMFTIDFHGEGITSCNKNQTRKIIICVITGGRTSCASA 157
           T+FS+   T  +   D +G+G TS   +    I   +  G ++  ASA
Sbjct: 618 TSFSSSGNTTVVSDYDVYGKGSTSTTTSSAGTICTVLAEGDKSVSASA 665


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 25.0 bits (52), Expect = 0.95
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -3

Query: 300 TNFSNEIRTQQMFTIDFHGEGITSCNKNQTRKIIICVITGGRTSCASA 157
           T+FS+   T  +   D +G+G TS   +    I   +  G ++  ASA
Sbjct: 619 TSFSSSGNTTVVSDYDVYGKGSTSTTTSSAGTICTVLAEGDKSVSASA 666


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 224  LHDVIPSPWKSIVNIC*VRISLEKLVPASEIRTPVHRSMRM 346
            +H    S W++ V +  V   +  L+ A EIR  V R +R+
Sbjct: 1136 IHPFPASLWRAAVCLPCVLYRINALLLADEIRRQVARDLRL 1176


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 318 RISLAGTNFSNEIRTQQMFTIDFHGEG 238
           R   AGT F  +  +++ F    HGEG
Sbjct: 286 RFQHAGTRFKTKQFSKENFLATLHGEG 312


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 110  HYCFTAEIGGAVVPTRADAQEVLP 181
            H  F AEIG ++V    D+ E+LP
Sbjct: 939  HIEFHAEIGMSLVLKVGDSSEMLP 962


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 256 NREHLLSTYFIRKIGTRQRDSN 321
           N EH  +T+F+RKI      SN
Sbjct: 326 NGEHKTNTHFMRKIPPGAEASN 347


>AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 131

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -3

Query: 324 GVRISLAGTNFSNEIRTQQMFTIDFHGEGITSCNKNQTRKIIICVITGGRTSCASAR 154
           GVR+  A    S    T   +  DF        +KN+  ++ +C+ T GR S  + R
Sbjct: 5   GVRLVTAALLLSVLFSTGSCYMRDF-------AHKNEINEMRVCIGTNGRMSVPANR 54


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +2

Query: 98   QTETHYCFTAEIGGAVVPTRADAQEVLPPVI 190
            Q ET  C+T+          ++ QEV P  +
Sbjct: 1179 QNETLSCYTSRRNSTTSNANSEPQEVAPQFV 1209


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,904
Number of Sequences: 2352
Number of extensions: 8399
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)