Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18f07
(703 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222566-1|BAD96286.1| 737|Homo sapiens dipeptidylpeptidase III... 130 6e-30
AJ271216-1|CAB72433.1| 737|Homo sapiens dipeptidyl-peptidase II... 130 6e-30
AK222847-1|BAD96567.1| 737|Homo sapiens dipeptidylpeptidase III... 129 8e-30
BC024271-1|AAH24271.1| 737|Homo sapiens dipeptidyl-peptidase 3 ... 129 1e-29
BC014038-1|AAH14038.1| 737|Homo sapiens dipeptidyl-peptidase 3 ... 129 1e-29
BC007221-1|AAH07221.1| 737|Homo sapiens dipeptidyl-peptidase 3 ... 129 1e-29
BC001446-1|AAH01446.1| 737|Homo sapiens dipeptidyl-peptidase 3 ... 129 1e-29
AB017970-1|BAA75785.1| 479|Homo sapiens dipeptidyl peptidase II... 128 2e-29
AK021449-1|BAB13828.1| 317|Homo sapiens protein ( Homo sapiens ... 77 8e-14
BC044311-1|AAH44311.2| 399|Homo sapiens hypothetical protein LO... 32 2.3
AY253917-1|AAP69949.1| 721|Homo sapiens TRIM9-like protein TNL ... 30 7.0
AL109810-3|CAI19161.1| 721|Homo sapiens tripartite motif-contai... 30 7.0
AL109810-2|CAI19160.1| 746|Homo sapiens tripartite motif-contai... 30 7.0
AK126782-1|BAC86689.1| 756|Homo sapiens protein ( Homo sapiens ... 30 7.0
>AK222566-1|BAD96286.1| 737|Homo sapiens dipeptidylpeptidase III
isoform 1 variant protein.
Length = 737
Score = 130 bits (313), Expect = 6e-30
Identities = 79/233 (33%), Positives = 127/233 (54%), Gaps = 16/233 (6%)
Frame = -2
Query: 693 SSQPWGPPSKSVALKPSDCTS-------LLVPEILKIFGYEGQEAEDVTYVNWLSLLWNG 535
S + W ++A +C + L P++L+IFG+EG +AEDV YVNWL+++ G
Sbjct: 491 SGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIYVNWLNMVRAG 550
Query: 534 AAKATEMYQPSTKTWLQAHARARFVIMRXXXXXXXXXXXXXXXE--PGK-NLLLTLQKDR 364
A E Y P W QAH +ARFVI+R G+ + + L + +
Sbjct: 551 LL-ALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPDARVRLDRSK 609
Query: 363 LATDGKKIIGDFLVKLQTIKATGDFSAGEKLFNKYSSL-DEP---WGRWRDIVLMHKQPR 196
+ + GK + FL +LQ +K+TGD + G L+ Y+++ D P + RD VL+ K+ R
Sbjct: 610 IRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRDTVLLRKESR 669
Query: 195 NIFVQPNTFHKGDAVELKRYPATAEGMVASWVDRFP--NTKVDDILEKLAKGE 43
+ VQPNT +G V+L Y A+A G++ S+ +RFP ++++IL +LA +
Sbjct: 670 KLIVQPNTHLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAAAD 722
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/24 (70%), Positives = 23/24 (95%)
Frame = -1
Query: 703 YDSKFTTLGSAFEECRAEAVGLYL 632
+DSKF+T+ S++EECRAE+VGLYL
Sbjct: 495 WDSKFSTIASSYEECRAESVGLYL 518
>AJ271216-1|CAB72433.1| 737|Homo sapiens dipeptidyl-peptidase III
protein.
Length = 737
Score = 130 bits (313), Expect = 6e-30
Identities = 79/233 (33%), Positives = 127/233 (54%), Gaps = 16/233 (6%)
Frame = -2
Query: 693 SSQPWGPPSKSVALKPSDCTS-------LLVPEILKIFGYEGQEAEDVTYVNWLSLLWNG 535
S + W ++A +C + L P++L+IFG+EG +AEDV YVNWL+++ G
Sbjct: 491 SGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIYVNWLNMVRAG 550
Query: 534 AAKATEMYQPSTKTWLQAHARARFVIMRXXXXXXXXXXXXXXXE--PGK-NLLLTLQKDR 364
A E Y P W QAH +ARFVI+R G+ + + L + +
Sbjct: 551 LL-ALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPDARVRLDRSK 609
Query: 363 LATDGKKIIGDFLVKLQTIKATGDFSAGEKLFNKYSSL-DEP---WGRWRDIVLMHKQPR 196
+ + GK + FL +LQ +K+TGD + G L+ Y+++ D P + RD VL+ K+ R
Sbjct: 610 IRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRDTVLLRKESR 669
Query: 195 NIFVQPNTFHKGDAVELKRYPATAEGMVASWVDRFP--NTKVDDILEKLAKGE 43
+ VQPNT +G V+L Y A+A G++ S+ +RFP ++++IL +LA +
Sbjct: 670 KLIVQPNTHLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLATAD 722
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/24 (70%), Positives = 23/24 (95%)
Frame = -1
Query: 703 YDSKFTTLGSAFEECRAEAVGLYL 632
+DSKF+T+ S++EECRAE+VGLYL
Sbjct: 495 WDSKFSTIASSYEECRAESVGLYL 518
>AK222847-1|BAD96567.1| 737|Homo sapiens dipeptidylpeptidase III
isoform 1 variant protein.
Length = 737
Score = 129 bits (312), Expect = 8e-30
Identities = 78/233 (33%), Positives = 127/233 (54%), Gaps = 16/233 (6%)
Frame = -2
Query: 693 SSQPWGPPSKSVALKPSDCTS-------LLVPEILKIFGYEGQEAEDVTYVNWLSLLWNG 535
S + W ++A +C + L P++L+IFG+EG +AEDV YVNWL+++ G
Sbjct: 491 SGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIYVNWLNMVRAG 550
Query: 534 AAKATEMYQPSTKTWLQAHARARFVIMRXXXXXXXXXXXXXXXE--PGK-NLLLTLQKDR 364
A E Y P W QAH +ARFVI+R G+ + + L + +
Sbjct: 551 LL-ALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPDARVRLDRSK 609
Query: 363 LATDGKKIIGDFLVKLQTIKATGDFSAGEKLFNKYSSL-DEP---WGRWRDIVLMHKQPR 196
+ + GK + FL +LQ +K+TGD + G L+ Y+++ D P + RD VL+ K+ R
Sbjct: 610 IRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRDTVLLRKESR 669
Query: 195 NIFVQPNTFHKGDAVELKRYPATAEGMVASWVDRFP--NTKVDDILEKLAKGE 43
+ VQPNT +G V+L Y A+A G++ S+ +RFP +++++L +LA +
Sbjct: 670 KLIVQPNTHLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEVLTQLATAD 722
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/24 (70%), Positives = 23/24 (95%)
Frame = -1
Query: 703 YDSKFTTLGSAFEECRAEAVGLYL 632
+DSKF+T+ S++EECRAE+VGLYL
Sbjct: 495 WDSKFSTIASSYEECRAESVGLYL 518
>BC024271-1|AAH24271.1| 737|Homo sapiens dipeptidyl-peptidase 3
protein.
Length = 737
Score = 129 bits (311), Expect = 1e-29
Identities = 79/233 (33%), Positives = 127/233 (54%), Gaps = 16/233 (6%)
Frame = -2
Query: 693 SSQPWGPPSKSVALKPSDCTS-------LLVPEILKIFGYEGQEAEDVTYVNWLSLLWNG 535
S + W ++A +C + L P++L+IFG+EG +AEDV YVNWL+++ G
Sbjct: 491 SGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIYVNWLNMVRAG 550
Query: 534 AAKATEMYQPSTKTWLQAHARARFVIMRXXXXXXXXXXXXXXXE--PGK-NLLLTLQKDR 364
A E Y P W QAH +ARFVI+R G+ + + L + +
Sbjct: 551 LL-ALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPDARVRLDRSK 609
Query: 363 LATDGKKIIGDFLVKLQTIKATGDFSAGEKLFNKYSSL-DEP---WGRWRDIVLMHKQPR 196
+ + GK + FL +LQ +K+TGD + G L+ Y+++ D P + RD VL+ K+ R
Sbjct: 610 IRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRDTVLLRKESR 669
Query: 195 NIFVQPNTFHKGDAVELKRYPATAEGMVASWVDRFP--NTKVDDILEKLAKGE 43
+ VQPNT +G V+L Y A+A G++ S+ +RFP ++++IL +LA +
Sbjct: 670 KLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLATAD 722
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/24 (70%), Positives = 23/24 (95%)
Frame = -1
Query: 703 YDSKFTTLGSAFEECRAEAVGLYL 632
+DSKF+T+ S++EECRAE+VGLYL
Sbjct: 495 WDSKFSTIASSYEECRAESVGLYL 518
>BC014038-1|AAH14038.1| 737|Homo sapiens dipeptidyl-peptidase 3
protein.
Length = 737
Score = 129 bits (311), Expect = 1e-29
Identities = 79/233 (33%), Positives = 127/233 (54%), Gaps = 16/233 (6%)
Frame = -2
Query: 693 SSQPWGPPSKSVALKPSDCTS-------LLVPEILKIFGYEGQEAEDVTYVNWLSLLWNG 535
S + W ++A +C + L P++L+IFG+EG +AEDV YVNWL+++ G
Sbjct: 491 SGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIYVNWLNMVRAG 550
Query: 534 AAKATEMYQPSTKTWLQAHARARFVIMRXXXXXXXXXXXXXXXE--PGK-NLLLTLQKDR 364
A E Y P W QAH +ARFVI+R G+ + + L + +
Sbjct: 551 LL-ALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPDARVRLDRSK 609
Query: 363 LATDGKKIIGDFLVKLQTIKATGDFSAGEKLFNKYSSL-DEP---WGRWRDIVLMHKQPR 196
+ + GK + FL +LQ +K+TGD + G L+ Y+++ D P + RD VL+ K+ R
Sbjct: 610 IRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRDTVLLRKESR 669
Query: 195 NIFVQPNTFHKGDAVELKRYPATAEGMVASWVDRFP--NTKVDDILEKLAKGE 43
+ VQPNT +G V+L Y A+A G++ S+ +RFP ++++IL +LA +
Sbjct: 670 KLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLATAD 722
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/24 (70%), Positives = 23/24 (95%)
Frame = -1
Query: 703 YDSKFTTLGSAFEECRAEAVGLYL 632
+DSKF+T+ S++EECRAE+VGLYL
Sbjct: 495 WDSKFSTIASSYEECRAESVGLYL 518
>BC007221-1|AAH07221.1| 737|Homo sapiens dipeptidyl-peptidase 3
protein.
Length = 737
Score = 129 bits (311), Expect = 1e-29
Identities = 79/233 (33%), Positives = 127/233 (54%), Gaps = 16/233 (6%)
Frame = -2
Query: 693 SSQPWGPPSKSVALKPSDCTS-------LLVPEILKIFGYEGQEAEDVTYVNWLSLLWNG 535
S + W ++A +C + L P++L+IFG+EG +AEDV YVNWL+++ G
Sbjct: 491 SGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIYVNWLNMVRAG 550
Query: 534 AAKATEMYQPSTKTWLQAHARARFVIMRXXXXXXXXXXXXXXXE--PGK-NLLLTLQKDR 364
A E Y P W QAH +ARFVI+R G+ + + L + +
Sbjct: 551 LL-ALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPDARVRLDRSK 609
Query: 363 LATDGKKIIGDFLVKLQTIKATGDFSAGEKLFNKYSSL-DEP---WGRWRDIVLMHKQPR 196
+ + GK + FL +LQ +K+TGD + G L+ Y+++ D P + RD VL+ K+ R
Sbjct: 610 IRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRDTVLLRKESR 669
Query: 195 NIFVQPNTFHKGDAVELKRYPATAEGMVASWVDRFP--NTKVDDILEKLAKGE 43
+ VQPNT +G V+L Y A+A G++ S+ +RFP ++++IL +LA +
Sbjct: 670 KLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLATAD 722
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/24 (70%), Positives = 23/24 (95%)
Frame = -1
Query: 703 YDSKFTTLGSAFEECRAEAVGLYL 632
+DSKF+T+ S++EECRAE+VGLYL
Sbjct: 495 WDSKFSTIASSYEECRAESVGLYL 518
>BC001446-1|AAH01446.1| 737|Homo sapiens dipeptidyl-peptidase 3
protein.
Length = 737
Score = 129 bits (311), Expect = 1e-29
Identities = 79/233 (33%), Positives = 127/233 (54%), Gaps = 16/233 (6%)
Frame = -2
Query: 693 SSQPWGPPSKSVALKPSDCTS-------LLVPEILKIFGYEGQEAEDVTYVNWLSLLWNG 535
S + W ++A +C + L P++L+IFG+EG +AEDV YVNWL+++ G
Sbjct: 491 SGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIYVNWLNMVRAG 550
Query: 534 AAKATEMYQPSTKTWLQAHARARFVIMRXXXXXXXXXXXXXXXE--PGK-NLLLTLQKDR 364
A E Y P W QAH +ARFVI+R G+ + + L + +
Sbjct: 551 LL-ALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPDARVRLDRSK 609
Query: 363 LATDGKKIIGDFLVKLQTIKATGDFSAGEKLFNKYSSL-DEP---WGRWRDIVLMHKQPR 196
+ + GK + FL +LQ +K+TGD + G L+ Y+++ D P + RD VL+ K+ R
Sbjct: 610 IRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRDTVLLRKESR 669
Query: 195 NIFVQPNTFHKGDAVELKRYPATAEGMVASWVDRFP--NTKVDDILEKLAKGE 43
+ VQPNT +G V+L Y A+A G++ S+ +RFP ++++IL +LA +
Sbjct: 670 KLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLATAD 722
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/24 (70%), Positives = 23/24 (95%)
Frame = -1
Query: 703 YDSKFTTLGSAFEECRAEAVGLYL 632
+DSKF+T+ S++EECRAE+VGLYL
Sbjct: 495 WDSKFSTIASSYEECRAESVGLYL 518
>AB017970-1|BAA75785.1| 479|Homo sapiens dipeptidyl peptidase III
protein.
Length = 479
Score = 128 bits (309), Expect = 2e-29
Identities = 79/233 (33%), Positives = 126/233 (54%), Gaps = 16/233 (6%)
Frame = -2
Query: 693 SSQPWGPPSKSVALKPSDCTS-------LLVPEILKIFGYEGQEAEDVTYVNWLSLLWNG 535
S + W ++A +C + L P++L+IFG+EG +AEDV YVNWL+++ G
Sbjct: 247 SGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIYVNWLNMVRAG 306
Query: 534 AAKATEMYQPSTKTWLQAHARARFVIMRXXXXXXXXXXXXXXXE--PGK-NLLLTLQKDR 364
A E Y P W QAH +ARFVI+R G+ + + L + +
Sbjct: 307 LL-ALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPDARVRLDRSK 365
Query: 363 LATDGKKIIGDFLVKLQTIKATGDFSAGEKLFNKYSSL-DEP---WGRWRDIVLMHKQPR 196
+ + GK + FL +LQ +K+TGD + G L+ Y+++ D P + RD VL+ K+ R
Sbjct: 366 IRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRDTVLLRKESR 425
Query: 195 NIFVQPNTFHKGDAVELKRYPATAEGMVASWVDRFP--NTKVDDILEKLAKGE 43
+ VQPNT +G V+L Y A+A G+ S+ +RFP ++++IL +LA +
Sbjct: 426 KLIVQPNTHLEGSDVQLLEYEASAAGLYRSFSERFPEDGPELEEILTQLATAD 478
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/24 (70%), Positives = 23/24 (95%)
Frame = -1
Query: 703 YDSKFTTLGSAFEECRAEAVGLYL 632
+DSKF+T+ S++EECRAE+VGLYL
Sbjct: 251 WDSKFSTIASSYEECRAESVGLYL 274
>AK021449-1|BAB13828.1| 317|Homo sapiens protein ( Homo sapiens
cDNA FLJ11387 fis, clone HEMBA1000542, moderately
similar to Rattus norvegicus mRNA for dipeptidyl
peptidase III. ).
Length = 317
Score = 76.6 bits (180), Expect = 8e-14
Identities = 42/118 (35%), Positives = 72/118 (61%), Gaps = 6/118 (5%)
Frame = -2
Query: 378 LQKDRLATDGKKIIGDFLVKLQTIKATGDFSAGEKLFNKYSSL-DEP---WGRWRDIVLM 211
L + ++ + GK + FL +LQ +K+TGD + G L+ Y+++ D P + RD VL+
Sbjct: 185 LDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRDTVLL 244
Query: 210 HKQPRNIFVQPNTFHKGDAVELKRYPATAEGMVASWVDRFP--NTKVDDILEKLAKGE 43
K+ R + VQPNT +G V+L Y A+A G++ S+ +RFP ++++IL +LA +
Sbjct: 245 RKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLATAD 302
>BC044311-1|AAH44311.2| 399|Homo sapiens hypothetical protein
LOC339344 protein.
Length = 399
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -3
Query: 620 QRYLRSSGTK-DRRPKTS-HTLTGSACCGMEPLRRPKCTNRPLKLGCRRTLARVS 462
QRY+ S + DRR TS H+ GS+ EP RP CT P + GC R R S
Sbjct: 152 QRYVLSEDRREDRRADTSAHSKAGSS--SPEPWARPSCT--PQEGGCPRPKERES 202
>AY253917-1|AAP69949.1| 721|Homo sapiens TRIM9-like protein TNL
protein.
Length = 721
Score = 30.3 bits (65), Expect = 7.0
Identities = 26/69 (37%), Positives = 32/69 (46%)
Frame = -3
Query: 437 RGAACSPSKSPSPGRISC*RCKRTVSLPTGRRSLAISS*NFKR*RQPETLVRAKNYSIST 258
RGAACS S S S I+C +C R+ SL R L F+R R E +V+
Sbjct: 103 RGAACS-SLSSSSSSITCPQCHRSASL--DHRGLR----GFQRNRLLEAIVQRYQQGRGA 155
Query: 257 AVSTSPGAA 231
TS AA
Sbjct: 156 VPGTSAAAA 164
>AL109810-3|CAI19161.1| 721|Homo sapiens tripartite
motif-containing 67 protein.
Length = 721
Score = 30.3 bits (65), Expect = 7.0
Identities = 26/69 (37%), Positives = 32/69 (46%)
Frame = -3
Query: 437 RGAACSPSKSPSPGRISC*RCKRTVSLPTGRRSLAISS*NFKR*RQPETLVRAKNYSIST 258
RGAACS S S S I+C +C R+ SL R L F+R R E +V+
Sbjct: 103 RGAACS-SLSSSSSSITCPQCHRSASL--DHRGLR----GFQRNRLLEAIVQRYQQGRGA 155
Query: 257 AVSTSPGAA 231
TS AA
Sbjct: 156 VPGTSAAAA 164
>AL109810-2|CAI19160.1| 746|Homo sapiens tripartite
motif-containing 67 protein.
Length = 746
Score = 30.3 bits (65), Expect = 7.0
Identities = 26/69 (37%), Positives = 32/69 (46%)
Frame = -3
Query: 437 RGAACSPSKSPSPGRISC*RCKRTVSLPTGRRSLAISS*NFKR*RQPETLVRAKNYSIST 258
RGAACS S S S I+C +C R+ SL R L F+R R E +V+
Sbjct: 143 RGAACS-SLSSSSSSITCPQCHRSASL--DHRGLR----GFQRNRLLEAIVQRYQQGRGA 195
Query: 257 AVSTSPGAA 231
TS AA
Sbjct: 196 VPGTSAAAA 204
>AK126782-1|BAC86689.1| 756|Homo sapiens protein ( Homo sapiens
cDNA FLJ44831 fis, clone BRACE3047482, moderately
similar to Homo sapiens tripartite motif-containing 9
(TRIM9). ).
Length = 756
Score = 30.3 bits (65), Expect = 7.0
Identities = 26/69 (37%), Positives = 32/69 (46%)
Frame = -3
Query: 437 RGAACSPSKSPSPGRISC*RCKRTVSLPTGRRSLAISS*NFKR*RQPETLVRAKNYSIST 258
RGAACS S S S I+C +C R+ SL R L F+R R E +V+
Sbjct: 143 RGAACS-SLSSSSSSITCPQCHRSASL--DHRGLR----GFQRNRLLEAIVQRYQQGRGA 195
Query: 257 AVSTSPGAA 231
TS AA
Sbjct: 196 VPGTSAAAA 204
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,361,376
Number of Sequences: 237096
Number of extensions: 1897909
Number of successful extensions: 5203
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5187
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -