Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18f03
(319 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT025014-1|ABE01244.1| 246|Drosophila melanogaster IP02191p pro... 27 3.9
AF281077-1|AAF91438.1| 255|Drosophila melanogaster daydream pro... 27 3.9
AF240763-1|AAF82437.1| 255|Drosophila melanogaster cysteine pro... 27 3.9
AE014134-2240|AAF53222.3| 1334|Drosophila melanogaster CG5792-PB... 27 3.9
AE013599-1352|AAF58613.3| 255|Drosophila melanogaster CG18188-P... 27 3.9
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC... 27 5.2
AE014297-465|AAN13380.1| 1573|Drosophila melanogaster CG10272-PC... 27 6.9
AE014297-464|AAN13379.1| 1848|Drosophila melanogaster CG10272-PD... 27 6.9
AE014297-463|AAN13378.1| 1848|Drosophila melanogaster CG10272-PB... 27 6.9
AE014297-462|AAF54122.2| 1848|Drosophila melanogaster CG10272-PA... 27 6.9
AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC... 26 9.1
>BT025014-1|ABE01244.1| 246|Drosophila melanogaster IP02191p
protein.
Length = 246
Score = 27.5 bits (58), Expect = 3.9
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 117 TNVLNAPSVRNLG-NNRYQPG--YQLSNNRFVSTSDINRITRNNDVPNIRNVFQGI 275
+N +NA + L N + +P Y L++ +F S +NR +NDV +R F+ +
Sbjct: 9 SNRVNAEPGQGLDLNEKLKPPAVYILNHEQFPQDSQLNRKGSSNDVNALRKTFESL 64
>AF281077-1|AAF91438.1| 255|Drosophila melanogaster daydream
protein.
Length = 255
Score = 27.5 bits (58), Expect = 3.9
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 117 TNVLNAPSVRNLG-NNRYQPG--YQLSNNRFVSTSDINRITRNNDVPNIRNVFQGI 275
+N +NA + L N + +P Y L++ +F S +NR +NDV +R F+ +
Sbjct: 18 SNRVNAEPGQGLDLNEKLKPPAVYILNHEQFPQDSQLNRKGSSNDVNALRKTFESL 73
>AF240763-1|AAF82437.1| 255|Drosophila melanogaster cysteine
protease protein.
Length = 255
Score = 27.5 bits (58), Expect = 3.9
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 117 TNVLNAPSVRNLG-NNRYQPG--YQLSNNRFVSTSDINRITRNNDVPNIRNVFQGI 275
+N +NA + L N + +P Y L++ +F S +NR +NDV +R F+ +
Sbjct: 18 SNRVNAEPGQGLDLNEKLKPPAVYILNHEQFPQDSQLNRKGSSNDVNALRKTFESL 73
>AE014134-2240|AAF53222.3| 1334|Drosophila melanogaster CG5792-PB,
isoform B protein.
Length = 1334
Score = 27.5 bits (58), Expect = 3.9
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +3
Query: 135 PSVRNLGN-NRYQPGY---QLSNNRFVSTSDINRITRNND 242
P RN G NR PG + + NR+ + D NR RN D
Sbjct: 191 PINRNCGPVNRNNPGMNPAEFNRNRYANAQDFNRNNRNMD 230
>AE013599-1352|AAF58613.3| 255|Drosophila melanogaster CG18188-PA
protein.
Length = 255
Score = 27.5 bits (58), Expect = 3.9
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 117 TNVLNAPSVRNLG-NNRYQPG--YQLSNNRFVSTSDINRITRNNDVPNIRNVFQGI 275
+N +NA + L N + +P Y L++ +F S +NR +NDV +R F+ +
Sbjct: 18 SNRVNAEPGQGLDLNEKLKPPAVYILNHEQFPQDSQLNRKGSSNDVNALRKTFESL 73
>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
protein.
Length = 4699
Score = 27.1 bits (57), Expect = 5.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 276 KCPEIHCVCWGHRC 235
+CPE H +C HRC
Sbjct: 2617 QCPETHFMCQNHRC 2630
>AE014297-465|AAN13380.1| 1573|Drosophila melanogaster CG10272-PC,
isoform C protein.
Length = 1573
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 206 HFRHKQNHS*QRCPQHTQCISGHFRPSNKLIAPIA 310
H H +H R PQH Q H N+ AP A
Sbjct: 1239 HHHHHHHHPQHRLPQHVQHQHPHQHHPNEFKAPPA 1273
>AE014297-464|AAN13379.1| 1848|Drosophila melanogaster CG10272-PD,
isoform D protein.
Length = 1848
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 206 HFRHKQNHS*QRCPQHTQCISGHFRPSNKLIAPIA 310
H H +H R PQH Q H N+ AP A
Sbjct: 1239 HHHHHHHHPQHRLPQHVQHQHPHQHHPNEFKAPPA 1273
>AE014297-463|AAN13378.1| 1848|Drosophila melanogaster CG10272-PB,
isoform B protein.
Length = 1848
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 206 HFRHKQNHS*QRCPQHTQCISGHFRPSNKLIAPIA 310
H H +H R PQH Q H N+ AP A
Sbjct: 1239 HHHHHHHHPQHRLPQHVQHQHPHQHHPNEFKAPPA 1273
>AE014297-462|AAF54122.2| 1848|Drosophila melanogaster CG10272-PA,
isoform A protein.
Length = 1848
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 206 HFRHKQNHS*QRCPQHTQCISGHFRPSNKLIAPIA 310
H H +H R PQH Q H N+ AP A
Sbjct: 1239 HHHHHHHHPQHRLPQHVQHQHPHQHHPNEFKAPPA 1273
>AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC,
isoform C protein.
Length = 1022
Score = 26.2 bits (55), Expect = 9.1
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +3
Query: 111 GFTNVLNAPSVR-NLGNNRYQPGYQLSNNRFVSTSDINRITRNNDVPNIRNVFQG 272
G N NAP +G N G NR+ +I + N +PN N F G
Sbjct: 728 GHGNGPNAPKEPLKIGGNIPNVGQGNRGNRYDPNPEIGAVPVGNPIPNEGNAFGG 782
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,963,591
Number of Sequences: 53049
Number of extensions: 290145
Number of successful extensions: 750
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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