Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc18e22
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF071162-1|AAC79998.1|  216|Anopheles gambiae glutathione S-tran...    26   1.3  
AF071160-2|AAC79994.1|  216|Anopheles gambiae glutathione S-tran...    26   1.3  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    24   4.0  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    24   4.0  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    24   4.0  
AF071163-1|AAC79999.1|  218|Anopheles gambiae glutathione S-tran...    24   5.3  
AF071160-4|AAC79992.1|  218|Anopheles gambiae glutathione S-tran...    24   5.3  

>AF071162-1|AAC79998.1|  216|Anopheles gambiae glutathione
           S-transferase D1-4 protein.
          Length = 216

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -1

Query: 597 ADVQVFEQVGKAPAANLPHVLRWYNQIASYTPAE--RKTWSQGTSP 466
           A +  FE  G   +A + +VLRWY  +    PA    ++W++   P
Sbjct: 165 ATLTTFEVAGYDFSAYV-NVLRWYKSMPELIPASDTNRSWAEAARP 209


>AF071160-2|AAC79994.1|  216|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 216

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -1

Query: 597 ADVQVFEQVGKAPAANLPHVLRWYNQIASYTPAE--RKTWSQGTSP 466
           A +  FE  G   +A + +VLRWY  +    PA    ++W++   P
Sbjct: 165 ATLTTFEVAGYDFSAYV-NVLRWYKSMPELIPASDTNRSWAEAARP 209


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 109 NFVVFDDTHNLQFIYAIPNRHKFGGSPEKAFHF-NSAYLVFHFLHI 243
           N  +FD   NL   +   N H+FGG P +   F  SA  V   LH+
Sbjct: 327 NAGLFDQ--NLALRWVRDNIHRFGGDPSRVTLFGESAGAVSVSLHL 370


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 109 NFVVFDDTHNLQFIYAIPNRHKFGGSPEKAFHF-NSAYLVFHFLHI 243
           N  +FD   NL   +   N H+FGG P +   F  SA  V   LH+
Sbjct: 327 NAGLFDQ--NLALRWVRDNIHRFGGDPSRVTLFGESAGAVSVSLHL 370


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 109 NFVVFDDTHNLQFIYAIPNRHKFGGSPEKAFHF-NSAYLVFHFLHI 243
           N  +FD   NL   +   N H+FGG P +   F  SA  V   LH+
Sbjct: 213 NAGLFDQ--NLALRWVRDNIHRFGGDPSRVTLFGESAGAVSVSLHL 256


>AF071163-1|AAC79999.1|  218|Anopheles gambiae glutathione
           S-transferase D1-3 protein.
          Length = 218

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
 Frame = -1

Query: 633 EKSYVSGYTPSQADVQVFEQVGKAPAANLP-----HVLRWYNQIASYTPAERK 490
           E+    G  P+ AD  +   +    AA        ++ RWY Q  +  PA  K
Sbjct: 151 ERFVAGGDDPTIADFSILASIATFDAAGYDLRRYENIHRWYEQTGNIAPAADK 203


>AF071160-4|AAC79992.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
 Frame = -1

Query: 633 EKSYVSGYTPSQADVQVFEQVGKAPAANLP-----HVLRWYNQIASYTPAERK 490
           E+    G  P+ AD  +   +    AA        ++ RWY Q  +  PA  K
Sbjct: 151 ERFVAGGDDPTIADFSILASIATFDAAGYDLRRYENIHRWYEQTGNIAPAADK 203


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,918
Number of Sequences: 2352
Number of extensions: 15103
Number of successful extensions: 48
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)