Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc18e14
         (527 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    27   0.29 
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   2.7  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   2.7  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   2.7  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   2.7  
AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase p...    23   4.8  
AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.         23   4.8  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   6.3  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 27.5 bits (58), Expect = 0.29
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 504 GTVVSLERSASAPGFPLKCV 445
           G +  LER+ S PG P KCV
Sbjct: 60  GAIEELERALSCPGQPSKCV 79


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 414 SERSQKTPSSRSEVEINEELQR 349
           S+ S +TP S +++  NE LQR
Sbjct: 154 SKSSSETPPSYNQLNYNENLQR 175


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 414 SERSQKTPSSRSEVEINEELQR 349
           S+ S +TP S +++  NE LQR
Sbjct: 154 SKSSSETPPSYNQLNYNENLQR 175


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 414 SERSQKTPSSRSEVEINEELQR 349
           S+ S +TP S +++  NE LQR
Sbjct: 154 SKSSSETPPSYNQLNYNENLQR 175


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 414 SERSQKTPSSRSEVEINEELQR 349
           S+ S +TP S +++  NE LQR
Sbjct: 154 SKSSSETPPSYNQLNYNENLQR 175


>AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase
           protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 181 CNAFIVDTTSLELSRIFHTVRVLCFRY 101
           C A   DT    ++R+FHTV+ L  R+
Sbjct: 61  CKAAEGDTCIAGIARVFHTVQELRKRH 87


>AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 181 CNAFIVDTTSLELSRIFHTVRVLCFRY 101
           C A   DT    ++R+FHTV+ L  R+
Sbjct: 61  CKAAEGDTCIAGIARVFHTVQELRKRH 87


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 423 RTSSERSQKTPSSRS-EVEINEELQRGNLLPVSSTVVPLPFYSVYG 289
           R   E+ ++  ++R  E E   E +R  ++ +    +P PF+S+ G
Sbjct: 510 REQREKEREREAARERERERERERERERMMHMMPHSLPRPFFSIPG 555


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,622
Number of Sequences: 2352
Number of extensions: 8621
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)