Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc18e11
         (729 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    28   0.34 
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           24   5.5  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 0.34
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 451 KYYRQTLVFASVLLPEIKSVLNKKCHNY 368
           K  RQTL+F++    EI+ +  K  HNY
Sbjct: 356 KQQRQTLMFSATFPAEIQELAGKFLHNY 383


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
 Frame = -3

Query: 442 RQTLVFASVLLPEIKSVLNKKCHNY----AGKVLVENPVEVGSIQQVLLQIPQIFHRFNA 275
           R T + A +  P ++S+L+    N      G+  +ENP  +  I  V L    IF    +
Sbjct: 28  RITTLPAEIFYP-LRSLLHLDLSNMDTRRTGEERIENPF-MKLIAGVDLH-QDIFFPLIS 84

Query: 274 STALESAEARFEY--FIKEVLPKQRDTLMSHTLIYVPSYFDYVRIRNYFKKEDISF 113
              L+ +  R EY  FI     ++R   +S+  I +P+  DY+ +       DIS+
Sbjct: 85  LVFLDLSNTRLEYQAFIALRSVQRRVQYVSYCNIGLPAIVDYLFVSKKIAMLDISY 140


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,548
Number of Sequences: 2352
Number of extensions: 13044
Number of successful extensions: 33
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)