Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc18e08
         (789 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   3.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   3.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   3.7  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   3.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   3.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   3.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.5  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   8.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.5  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 725 GIWYXPRLAVRRFVFFVNINY 787
           G +Y P   + + + FVN+NY
Sbjct: 128 GSFYQPDYFIDKNIVFVNLNY 148


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 725 GIWYXPRLAVRRFVFFVNINY 787
           G +Y P   + + + FVN+NY
Sbjct: 128 GSFYQPDYFIDKNIVFVNLNY 148


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 725 GIWYXPRLAVRRFVFFVNINY 787
           G +Y P   + + + FVN+NY
Sbjct: 128 GSFYQPDYFIDKNIVFVNLNY 148


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 725 GIWYXPRLAVRRFVFFVNINY 787
           G +Y P   + + + FVN+NY
Sbjct: 128 GSFYQPDYFIDKNIVFVNLNY 148


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 725 GIWYXPRLAVRRFVFFVNINY 787
           G +Y P   + + + FVN+NY
Sbjct: 128 GSFYQPDYFIDKNIVFVNLNY 148


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = +2

Query: 533 DGRRVLARAQHL---RNHLLQQPRLQFHSVRELALHNXLDNTL 652
           D  ++L R + L    N L   P   FH +R L   +  DNT+
Sbjct: 36  DAIKILNRLEELDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTI 78


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 692 VTLLXHVVWSRGIWY 736
           VTL  H VW RG  Y
Sbjct: 197 VTLHWHGVWQRGSQY 211


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 692 VTLLXHVVWSRGIWY 736
           VTL  H VW RG  Y
Sbjct: 197 VTLHWHGVWQRGSQY 211


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 555 VHSTCGITSSSSHACN 602
           +H+TCG  ++  HA N
Sbjct: 356 LHATCGTKNALLHAVN 371


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 131 NFVKHVHGVGHIVAAKYHV 187
           N   H H  GH + A++HV
Sbjct: 318 NNQNHHHHAGHHIHAQHHV 336


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,922
Number of Sequences: 336
Number of extensions: 3758
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)