Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18e06
(765 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41450 Cluster: Uncharacterized 22.7 kDa protein in GTA... 342 5e-93
UniRef50_P41449 Cluster: Uncharacterized 15.0 kDa protein in GTA... 109 7e-23
UniRef50_O10304 Cluster: Uncharacterized 13.0 kDa protein; n=6; ... 55 2e-06
UniRef50_UPI00015B63F8 Cluster: PREDICTED: similar to conserved ... 43 0.007
UniRef50_Q06VS5 Cluster: Putative uncharacterized protein; n=1; ... 41 0.029
UniRef50_A6MI51 Cluster: Putative uncharacterized protein; n=1; ... 41 0.039
UniRef50_Q9VZJ9 Cluster: CG1134-PA; n=5; Diptera|Rep: CG1134-PA ... 40 0.089
UniRef50_Q4UIV4 Cluster: Putative uncharacterized protein; n=2; ... 40 0.089
UniRef50_UPI000051A2DF Cluster: PREDICTED: similar to leucine ri... 39 0.12
UniRef50_Q0E586 Cluster: 64.2 kDa Inhibitor of apoptosis/RING-fi... 39 0.12
UniRef50_UPI0000D55C24 Cluster: PREDICTED: similar to leucine ri... 38 0.27
UniRef50_Q55DC5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.36
UniRef50_UPI0000D57644 Cluster: PREDICTED: similar to CG1134-PA;... 37 0.48
UniRef50_P53110 Cluster: Uncharacterized protein YGL159W; n=2; S... 37 0.48
UniRef50_Q969V5 Cluster: RING finger protein C1orf166; n=22; Eut... 37 0.48
UniRef50_UPI00004997E3 Cluster: hypothetical protein 292.t00011;... 37 0.63
UniRef50_UPI00015B5D8A Cluster: PREDICTED: similar to CG1134-PA;... 36 0.83
UniRef50_UPI0000F21526 Cluster: PREDICTED: hypothetical protein;... 36 0.83
UniRef50_Q08CE8 Cluster: Zgc:153175; n=2; Danio rerio|Rep: Zgc:1... 36 0.83
UniRef50_Q1RPW2 Cluster: Zinc finger protein; n=1; Ciona intesti... 36 0.83
UniRef50_Q17911 Cluster: Putative uncharacterized protein; n=2; ... 36 1.1
UniRef50_A2EIZ6 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_O60291 Cluster: Probable E3 ubiquitin-protein ligase MG... 36 1.1
UniRef50_UPI0000F2E98C Cluster: PREDICTED: similar to ret finger... 36 1.5
UniRef50_Q4SVK5 Cluster: Chromosome undetermined SCAF13756, whol... 36 1.5
UniRef50_A5KBX2 Cluster: RING zinc finger protein, putative; n=7... 36 1.5
UniRef50_UPI00015A71AE Cluster: hypothetical protein LOC553620; ... 35 1.9
UniRef50_Q9LQ59 Cluster: T30E16.12; n=16; Magnoliophyta|Rep: T30... 35 1.9
UniRef50_A7PCB1 Cluster: Chromosome chr2 scaffold_11, whole geno... 35 1.9
UniRef50_Q7QRF7 Cluster: GLP_448_23002_22403; n=1; Giardia lambl... 35 1.9
UniRef50_Q6UWE0 Cluster: E3 ubiquitin-protein ligase LRSAM1; n=3... 35 1.9
UniRef50_UPI0000F2D5CC Cluster: PREDICTED: hypothetical protein;... 35 2.5
UniRef50_Q9LDD1 Cluster: Genomic DNA, chromosome 3, P1 clone: MG... 35 2.5
UniRef50_Q4QHA0 Cluster: Putative uncharacterized protein; n=3; ... 35 2.5
UniRef50_A4KX78 Cluster: Iap-like protein; n=1; Heliothis viresc... 34 3.4
UniRef50_A2F0R0 Cluster: Putative uncharacterized protein; n=2; ... 34 3.4
UniRef50_Q4RHC4 Cluster: Chromosome 3 SCAF15050, whole genome sh... 34 4.4
UniRef50_Q9EMM6 Cluster: AMV173; n=1; Amsacta moorei entomopoxvi... 34 4.4
UniRef50_A7NWC3 Cluster: Chromosome chr5 scaffold_2, whole genom... 34 4.4
UniRef50_A2X0I0 Cluster: Putative uncharacterized protein; n=3; ... 34 4.4
UniRef50_Q7JP67 Cluster: Putative uncharacterized protein; n=5; ... 34 4.4
UniRef50_Q4D2A5 Cluster: Putative uncharacterized protein; n=2; ... 34 4.4
UniRef50_Q1RPV6 Cluster: Zinc finger protein; n=1; Ciona intesti... 34 4.4
UniRef50_A2G3U3 Cluster: Ankyrin repeat protein, putative; n=3; ... 34 4.4
UniRef50_Q96PX1 Cluster: RING finger protein 157; n=56; Eukaryot... 34 4.4
UniRef50_Q1F0F6 Cluster: ATP-binding region, ATPase-like:Histidi... 33 5.9
UniRef50_Q01JP3 Cluster: OSIGBa0139P06.5 protein; n=11; Magnolio... 33 5.9
UniRef50_Q9VY98 Cluster: CG9941-PA; n=5; Drosophila|Rep: CG9941-... 33 5.9
UniRef50_Q4D0Q3 Cluster: Putative uncharacterized protein; n=2; ... 33 5.9
UniRef50_Q1RPV4 Cluster: Zinc finger protein; n=1; Ciona intesti... 33 5.9
UniRef50_Q17FY8 Cluster: Mahogunin; n=5; Endopterygota|Rep: Maho... 33 5.9
UniRef50_A2FJR6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_A0E3S1 Cluster: Chromosome undetermined scaffold_77, wh... 33 5.9
UniRef50_UPI00006CA9E3 Cluster: hypothetical protein TTHERM_0032... 33 7.8
UniRef50_Q06VJ9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_A4M5P7 Cluster: Putative uncharacterized protein precur... 33 7.8
UniRef50_Q8VX96 Cluster: Putative RING zinc finger protein; n=1;... 33 7.8
UniRef50_Q7QVP2 Cluster: GLP_305_8339_7131; n=1; Giardia lamblia... 33 7.8
UniRef50_Q5DFJ2 Cluster: SJCHGC09572 protein; n=1; Schistosoma j... 33 7.8
UniRef50_Q7M3S9 Cluster: RING finger protein B; n=2; Dictyosteli... 33 7.8
>UniRef50_P41450 Cluster: Uncharacterized 22.7 kDa protein in
GTA-P79 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 22.7 kDa
protein in GTA-P79 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 192
Score = 342 bits (841), Expect = 5e-93
Identities = 167/193 (86%), Positives = 173/193 (89%)
Frame = -2
Query: 626 MLPYEMVISVLVYLSPAQILNLNLPLAYQKSVLFASNSAKVNERIRRLARXXXXXXDSYF 447
MLPYEMVI+VLVYLSPAQILNLNLP AYQKSVLFASNSAKVNERIRR AR YF
Sbjct: 1 MLPYEMVIAVLVYLSPAQILNLNLPFAYQKSVLFASNSAKVNERIRRRARDDNDDDP-YF 59
Query: 446 YHKQFIKINFLTKKIINVYNKTEMCIRATFDGRYVVTHDILMCFVNKSYVKQLLRGVDTC 267
Y+KQFIKINFLTKKIINVYNKTE CIRATFDGRYVVT D+LMCFVNKSY+KQLLR VDT
Sbjct: 60 YYKQFIKINFLTKKIINVYNKTEKCIRATFDGRYVVTRDVLMCFVNKSYMKQLLREVDTR 119
Query: 266 ITLQQLVKMYSPEFGLCVNSKNMFVLTESVLTSISLKHSFGKCEWLDKNIKTVCLQLRKL 87
ITLQQLVKMYSPEFG VNSK MFVLTESVL SI LKHSFGKCEWLDKNIKTVCLQLRK+
Sbjct: 120 ITLQQLVKMYSPEFGFYVNSKIMFVLTESVLASICLKHSFGKCEWLDKNIKTVCLQLRKI 179
Query: 86 CINNKQHTTCLPY 48
CINNKQH+TCL Y
Sbjct: 180 CINNKQHSTCLSY 192
>UniRef50_P41449 Cluster: Uncharacterized 15.0 kDa protein in
GTA-P79 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 15.0 kDa
protein in GTA-P79 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 131
Score = 109 bits (262), Expect = 7e-23
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = -1
Query: 765 VYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLKYKTL 631
VYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLKYKTL
Sbjct: 87 VYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLKYKTL 131
>UniRef50_O10304 Cluster: Uncharacterized 13.0 kDa protein; n=6;
Nucleopolyhedrovirus|Rep: Uncharacterized 13.0 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 120
Score = 55.2 bits (127), Expect = 2e-06
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -1
Query: 759 PAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLKY 640
PAV+ L CGHSCLCTDCD+ N C +CKS +++KL++
Sbjct: 81 PAVSCLPCGHSCLCTDCDQL--FANVCFECKSAVQFKLRF 118
>UniRef50_UPI00015B63F8 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 700
Score = 43.2 bits (97), Expect = 0.007
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -1
Query: 753 VTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLK 643
V +L CGH C CT C E ++V+ CP C++ I K++
Sbjct: 662 VIFLPCGHLCCCTKCTEMISVE--CPMCRTSIERKIR 696
>UniRef50_Q06VS5 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 598
Score = 41.1 bits (92), Expect = 0.029
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 753 VTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLKY 640
VTY +CGHS +C CD ++ D C CK + L++
Sbjct: 558 VTYFYCGHSAVCKLCDGELSTDKQCIVCKKFVPLTLRF 595
>UniRef50_A6MI51 Cluster: Putative uncharacterized protein; n=1;
Nyctotherus ovalis|Rep: Putative uncharacterized protein
- Nyctotherus ovalis
Length = 227
Score = 40.7 bits (91), Expect = 0.039
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 747 YLHCGHSCLCTDC-DETVNVDNTCPKCKSGIR 655
+ CGH CLC +C DE + N CP CK +R
Sbjct: 189 FTDCGHKCLCKECKDEYMRKYNICPVCKKNVR 220
>UniRef50_Q9VZJ9 Cluster: CG1134-PA; n=5; Diptera|Rep: CG1134-PA -
Drosophila melanogaster (Fruit fly)
Length = 338
Score = 39.5 bits (88), Expect = 0.089
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 753 VTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 658
+ L CGH CLC DC + ++V TCP C+ I
Sbjct: 300 IILLPCGHVCLCEDCAQKISV--TCPVCRGSI 329
>UniRef50_Q4UIV4 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 289
Score = 39.5 bits (88), Expect = 0.089
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -1
Query: 744 LHCGHSCLCTDCDETVNVD-NTCPKCKS 664
L C H CLC+DC +TV++ CP C+S
Sbjct: 250 LPCSHICLCSDCSKTVSIQFGACPMCRS 277
>UniRef50_UPI000051A2DF Cluster: PREDICTED: similar to leucine rich
repeat and sterile alpha motif containing 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to leucine rich repeat
and sterile alpha motif containing 1 - Apis mellifera
Length = 668
Score = 39.1 bits (87), Expect = 0.12
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 753 VTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKL 646
V +L CGH C C+ C ++ D CP C+S I +K+
Sbjct: 630 VIFLPCGHLCCCSGCANMISSD--CPMCRSVIEHKI 663
>UniRef50_Q0E586 Cluster: 64.2 kDa Inhibitor of
apoptosis/RING-finger profile; n=2; dsDNA viruses, no
RNA stage|Rep: 64.2 kDa Inhibitor of
apoptosis/RING-finger profile - Spodoptera frugiperda
ascovirus 1a
Length = 567
Score = 39.1 bits (87), Expect = 0.12
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 756 AVTYLHCGHSCLCTDCDE--TVNVDNTCPKCKSGIRYKLKYK 637
+VTY CGHS +C CDE +V+ CP C+ + Y ++
Sbjct: 517 SVTYGTCGHSVVCVSCDEANADDVEKKCPLCEQIVMYTYVFR 558
>UniRef50_UPI0000D55C24 Cluster: PREDICTED: similar to leucine rich
repeat and sterile alpha motif containing 1, partial;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
leucine rich repeat and sterile alpha motif containing
1, partial - Tribolium castaneum
Length = 437
Score = 37.9 bits (84), Expect = 0.27
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 753 VTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLK 643
V ++ CGH C C+ C T+ N CP C++ I K++
Sbjct: 401 VIFVPCGHFCCCSQCPVTL---NDCPMCRTSIERKIR 434
>UniRef50_Q55DC5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 423
Score = 37.5 bits (83), Expect = 0.36
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 753 VTYLHCGHSCLCTDCDETV-NVDNTCPKCKSGIRYKLKYKT 634
V + C H CLC+ C E + NV CP C++ IR LK T
Sbjct: 370 VLAIPCRHFCLCSKCAEIMRNVSLKCPICRTPIRALLKIDT 410
>UniRef50_UPI0000D57644 Cluster: PREDICTED: similar to CG1134-PA;
n=2; Endopterygota|Rep: PREDICTED: similar to CG1134-PA
- Tribolium castaneum
Length = 341
Score = 37.1 bits (82), Expect = 0.48
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 753 VTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYK 649
+ L CGH CLC DC ++++ CP C++ I K
Sbjct: 303 IILLPCGHVCLCEDC--SLDISANCPVCRAPIEKK 335
>UniRef50_P53110 Cluster: Uncharacterized protein YGL159W; n=2;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL159W - Saccharomyces cerevisiae (Baker's yeast)
Length = 370
Score = 37.1 bits (82), Expect = 0.48
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 79 LIQSFLNCKHTVFIFLSNHSHLPNECFKEID-VNTDSVNTNIFLLFTHKPNSGLYILTS 252
+I+S L+ ++ ++ NH L N FK++D N DS ++IF+ K SG+ IL +
Sbjct: 23 IIESLLSLHESLRLYSQNHEILLNRMFKKLDETNADSNISHIFMPVVSKDFSGIKILVN 81
>UniRef50_Q969V5 Cluster: RING finger protein C1orf166; n=22;
Euteleostomi|Rep: RING finger protein C1orf166 - Homo
sapiens (Human)
Length = 352
Score = 37.1 bits (82), Expect = 0.48
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 762 YPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 658
+ + +L CGH C CT+C + CP C+ I
Sbjct: 309 FKSCVFLECGHVCSCTECYRALPEPKKCPICRQAI 343
>UniRef50_UPI00004997E3 Cluster: hypothetical protein 292.t00011;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 292.t00011 - Entamoeba histolytica HM-1:IMSS
Length = 372
Score = 36.7 bits (81), Expect = 0.63
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 750 TYLHCGHSCLCTDCDETVNVDNTCPKC 670
T +CGH C C C +T+ + CPKC
Sbjct: 327 TIFNCGHCCYCYCCSKTLGLTFKCPKC 353
>UniRef50_UPI00015B5D8A Cluster: PREDICTED: similar to CG1134-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG1134-PA - Nasonia vitripennis
Length = 342
Score = 36.3 bits (80), Expect = 0.83
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 753 VTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYK 649
+ L CGH CLC DC ++++ CP C++ I K
Sbjct: 304 IILLPCGHVCLCEDC--SLDIARDCPICRNKISQK 336
>UniRef50_UPI0000F21526 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 283
Score = 36.3 bits (80), Expect = 0.83
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 750 TYLHCGHSCLCTDCDETVNVD-NTCPKCKSGIRYKLKY 640
T L CGH C+CT C V + TCP C+ + + Y
Sbjct: 244 TRLSCGHKCVCTPCAMKVYMTFGTCPLCRKRLDFVQPY 281
>UniRef50_Q08CE8 Cluster: Zgc:153175; n=2; Danio rerio|Rep:
Zgc:153175 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 498
Score = 36.3 bits (80), Expect = 0.83
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = -1
Query: 738 CGHSCLCTDCDE--TVNVDNTCPKCKSGIRYKLK-YKTL 631
CGH C+C+DC T + +CP C+S IR +K Y+++
Sbjct: 460 CGHMCVCSDCGVKLTETSNPSCPVCRSPIRDIIKIYRSM 498
>UniRef50_Q1RPW2 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 879
Score = 36.3 bits (80), Expect = 0.83
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 753 VTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLK 643
+ ++ CGH C CT+C E + CP C+S I +K
Sbjct: 842 IVFVPCGHLCTCTECAEAL---RKCPICRSKIERGIK 875
>UniRef50_Q17911 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 529
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 744 LHCGHSCLCTDCDETVNV-DNTCPKCKSGIRYKLKYKTL*HVALRNGDFRVGLLVAG 577
L C H C+C++C +++ N CP C+S R ++ + H RN + LV G
Sbjct: 282 LPCRHLCVCSNCADSLRYKHNNCPICRSPFRALIRLRA--HRQTRNQIYETVSLVEG 336
>UniRef50_A2EIZ6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 606
Score = 35.9 bits (79), Expect = 1.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 756 AVTYLHCGHSCLCTDCDETVNVDNTCPKC 670
+V +++CGHS C DC + +NV CP C
Sbjct: 505 SVFFINCGHSVFCQDCIQKLNV-TVCPLC 532
>UniRef50_O60291 Cluster: Probable E3 ubiquitin-protein ligase
MGRN1; n=19; Euteleostomi|Rep: Probable E3
ubiquitin-protein ligase MGRN1 - Homo sapiens (Human)
Length = 552
Score = 35.9 bits (79), Expect = 1.1
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 744 LHCGHSCLCTDCDETVNVD-NTCPKCKSGIRYKLKYKTL 631
L C H CLCT C +T+ N CP C+ R L+ + +
Sbjct: 291 LPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIRAV 329
>UniRef50_UPI0000F2E98C Cluster: PREDICTED: similar to ret finger
protein; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ret finger protein - Monodelphis domestica
Length = 531
Score = 35.5 bits (78), Expect = 1.5
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Frame = -1
Query: 753 VTYLHCGHSCLCTDC----DETVNVDNTCPKCKSGIRY 652
VT L CGH+ C DC +E + TCP+C++ IRY
Sbjct: 27 VTALKCGHN-FCKDCLLQCNEQADATLTCPECRAVIRY 63
>UniRef50_Q4SVK5 Cluster: Chromosome undetermined SCAF13756, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF13756, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 285
Score = 35.5 bits (78), Expect = 1.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 756 AVTYLHCGHSCLCTDCDETVNVD-NTCPKCKSGIR 655
A L CGH CLC +C + ++ +CP C+ IR
Sbjct: 237 ATNTLSCGHQCLCQNCTGRIILEFGSCPLCRHVIR 271
>UniRef50_A5KBX2 Cluster: RING zinc finger protein, putative; n=7;
Plasmodium|Rep: RING zinc finger protein, putative -
Plasmodium vivax
Length = 305
Score = 35.5 bits (78), Expect = 1.5
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -1
Query: 744 LHCGHSCLCTDCDETVNVDNT-CPKCKSGIR 655
L C H CLC C V + NT CP C+ +R
Sbjct: 254 LPCRHMCLCNVCANVVRMQNTKCPICRQDVR 284
>UniRef50_UPI00015A71AE Cluster: hypothetical protein LOC553620;
n=1; Danio rerio|Rep: hypothetical protein LOC553620 -
Danio rerio
Length = 492
Score = 35.1 bits (77), Expect = 1.9
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 738 CGHSCLCTDCDETV--NVDNTCPKCKSGIRYKLK 643
CGH CLC DC + + ++ CP C+ I+ +K
Sbjct: 455 CGHMCLCNDCGQRLKRQINACCPICRRPIKDVIK 488
>UniRef50_Q9LQ59 Cluster: T30E16.12; n=16; Magnoliophyta|Rep:
T30E16.12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 341
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 747 YLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLK 643
++ CGH C CT C + TCP C+ I+ LK
Sbjct: 306 FVECGHMCCCTPCSLQL---RTCPLCRERIQQVLK 337
>UniRef50_A7PCB1 Cluster: Chromosome chr2 scaffold_11, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr2 scaffold_11, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 723
Score = 35.1 bits (77), Expect = 1.9
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 756 AVTYLHCGHSCLCTDCDETVNVDN--TCPKCKSGIRYKLK 643
+V +L C H LC +C+E TCP C++ I +++
Sbjct: 678 SVVFLPCAHEVLCANCNEDYGKKGKATCPSCRAPIEQRIR 717
>UniRef50_Q7QRF7 Cluster: GLP_448_23002_22403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_448_23002_22403 - Giardia lamblia
ATCC 50803
Length = 199
Score = 35.1 bits (77), Expect = 1.9
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 747 YLHCGHSCLCTDCDE-TVNVDNTCPKCKS 664
++ CGH C+C+ C E + VD CP C++
Sbjct: 160 FVPCGHLCVCSSCAELLMRVDAKCPYCRA 188
>UniRef50_Q6UWE0 Cluster: E3 ubiquitin-protein ligase LRSAM1; n=33;
Euteleostomi|Rep: E3 ubiquitin-protein ligase LRSAM1 -
Homo sapiens (Human)
Length = 723
Score = 35.1 bits (77), Expect = 1.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 747 YLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLK 643
+L+CGH C C C + + TCP C+ I +L+
Sbjct: 687 FLNCGHVCCCQQCCQPL---RTCPLCRQDIAQRLR 718
>UniRef50_UPI0000F2D5CC Cluster: PREDICTED: hypothetical protein;
n=4; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 457
Score = 34.7 bits (76), Expect = 2.5
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = -1
Query: 753 VTYLHCGHSCLCTDC----DETVNVDNTCPKCKSGIRY 652
VT L CGH+ C DC E + TCP+C++ IRY
Sbjct: 27 VTALKCGHN-FCKDCLFQCGEQADATLTCPECRAVIRY 63
>UniRef50_Q9LDD1 Cluster: Genomic DNA, chromosome 3, P1 clone: MGH6;
n=2; Arabidopsis thaliana|Rep: Genomic DNA, chromosome
3, P1 clone: MGH6 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 335
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 756 AVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 664
+V L C H CLC+ C ++ NTCP CKS
Sbjct: 296 SVLLLPCRHMCLCSVCGSSL---NTCPICKS 323
>UniRef50_Q4QHA0 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 360
Score = 34.7 bits (76), Expect = 2.5
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 750 TYLHCGHSCLCTDCDETVNV-DNTCPKCKSGI 658
T L C H CLC +C + + DN CP C+ I
Sbjct: 323 TILPCRHMCLCNECAAHLRLSDNRCPLCRGYI 354
>UniRef50_A4KX78 Cluster: Iap-like protein; n=1; Heliothis virescens
ascovirus 3e|Rep: Iap-like protein - Heliothis virescens
ascovirus 3e
Length = 113
Score = 34.3 bits (75), Expect = 3.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 753 VTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKL 646
V +L C H C C E + V+ +CP C+S + KL
Sbjct: 73 VVFLPCRHLVCCKSCSELL-VNTSCPMCRSRVAVKL 107
>UniRef50_A2F0R0 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 501
Score = 34.3 bits (75), Expect = 3.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 759 PAVTYLHCGHSCLCTDCDETVNVDNTCPKC 670
P + Y+ CGH C C +C + + CP C
Sbjct: 460 PDLVYMPCGHQCCCHECMSSCDDCKKCPIC 489
>UniRef50_Q4RHC4 Cluster: Chromosome 3 SCAF15050, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 3 SCAF15050, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 496
Score = 33.9 bits (74), Expect = 4.4
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 744 LHCGHSCLCTDCDETVNVD-NTCPKCKSGIRYKLKYKTL 631
L C H CLC C +T+ N CP C+ R L+ + +
Sbjct: 334 LPCRHLCLCNSCADTLRYQANNCPICRLPFRALLQIRAV 372
>UniRef50_Q9EMM6 Cluster: AMV173; n=1; Amsacta moorei entomopoxvirus
'L'|Rep: AMV173 - Amsacta moorei entomopoxvirus (AmEPV)
Length = 440
Score = 33.9 bits (74), Expect = 4.4
Identities = 24/84 (28%), Positives = 39/84 (46%)
Frame = -2
Query: 434 FIKINFLTKKIINVYNKTEMCIRATFDGRYVVTHDILMCFVNKSYVKQLLRGVDTCITLQ 255
FIKINFL K+ ++ + +YV H+ L +NK Y K L + +D
Sbjct: 12 FIKINFLIPKLYSISVSNNI----NNIEKYVKYHNKLAKNINKKYRKDLYKYIDIDELYN 67
Query: 254 QLVKMYSPEFGLCVNSKNMFVLTE 183
+ + + L +N+KN + L E
Sbjct: 68 FKYSISNRKIPLNINTKNCYFLNE 91
>UniRef50_A7NWC3 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 797
Score = 33.9 bits (74), Expect = 4.4
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 756 AVTYLHCGHSCLCTDCDETVNVD--NTCPKCKSGIRYKLKYK 637
+V +L C H +CT C+E CP C+S I+ +++ +
Sbjct: 752 SVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSPIQRRIRIR 793
>UniRef50_A2X0I0 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 343
Score = 33.9 bits (74), Expect = 4.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 756 AVTYLHCGHSCLCTDCDETVNVDNTCPKCK 667
AV + C H CLC DC++ +V CP C+
Sbjct: 305 AVLVMPCRHLCLCADCEKNADV---CPVCR 331
>UniRef50_Q7JP67 Cluster: Putative uncharacterized protein; n=5;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 617
Score = 33.9 bits (74), Expect = 4.4
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -1
Query: 738 CGHSCLCTDCD-ETVNVDNTCPKCKSGIRYKLK-YKT 634
CGH C+C +C + TCP C++ ++ +K YK+
Sbjct: 581 CGHMCMCFECGRRLLTTKGTCPICRAPVQDVIKTYKS 617
>UniRef50_Q4D2A5 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 363
Score = 33.9 bits (74), Expect = 4.4
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -1
Query: 750 TYLHCGHSCLCTDCDETVNV--DNTCPKCKSGI 658
T L C H CLC +C + +N CP C+S I
Sbjct: 325 TLLPCRHMCLCYECASILRFQQNNRCPVCRSNI 357
>UniRef50_Q1RPV6 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 721
Score = 33.9 bits (74), Expect = 4.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 747 YLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLK 643
+L CGH C C C + +CP C+S + K+K
Sbjct: 686 FLPCGHVCACFICSTQL---QSCPMCRSDVAQKIK 717
>UniRef50_A2G3U3 Cluster: Ankyrin repeat protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ankyrin repeat protein,
putative - Trichomonas vaginalis G3
Length = 703
Score = 33.9 bits (74), Expect = 4.4
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -1
Query: 759 PAVT-YLHCGHSCLCTDC-DETVNVDNTCPKCKSGI 658
PAV + CGH C+C C E V TCP CK I
Sbjct: 660 PAVAAMMPCGHLCVCEVCLKERVGQIKTCPICKKDI 695
>UniRef50_Q96PX1 Cluster: RING finger protein 157; n=56;
Eukaryota|Rep: RING finger protein 157 - Homo sapiens
(Human)
Length = 679
Score = 33.9 bits (74), Expect = 4.4
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 744 LHCGHSCLCTDCDETVNVD-NTCPKCKSGIRYKLKYKTL 631
L C H CLC C +T+ N CP C+ R L+ + +
Sbjct: 290 LPCRHLCLCNTCADTLRYQANNCPICRLPFRALLQIRAM 328
>UniRef50_Q1F0F6 Cluster: ATP-binding region, ATPase-like:Histidine
kinase, HAMP region precursor; n=1; Clostridium
oremlandii OhILAs|Rep: ATP-binding region,
ATPase-like:Histidine kinase, HAMP region precursor -
Clostridium oremlandii OhILAs
Length = 580
Score = 33.5 bits (73), Expect = 5.9
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = -2
Query: 611 MVISVLVYLSPAQILNLNLPLAYQKSV-LFASNSAKVNERIR-RLARXXXXXXDSYFYHK 438
++I +LV L QI N NLPL S + + S +V IR R+ +
Sbjct: 18 IMIFLLVVLVRGQIKNTNLPLTIDLSQQIITAKSGEVGAWIRQRIVELQVLTENETLISM 77
Query: 437 QFIKINFLTKKIINVYNKT-EMCIRATFDGRYVVTHDILMCFVNKSYVKQLLRG 279
KI +K+ +N+ E T DG+ VT+D + N+ Y +++ G
Sbjct: 78 DMDKIKPYMRKMDESHNEDFESFAIITLDGQAWVTNDTYIDVNNRPYFEEIKAG 131
>UniRef50_Q01JP3 Cluster: OSIGBa0139P06.5 protein; n=11;
Magnoliophyta|Rep: OSIGBa0139P06.5 protein - Oryza
sativa (Rice)
Length = 324
Score = 33.5 bits (73), Expect = 5.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 744 LHCGHSCLCTDCDETVNVDNTCPKCKSGIR 655
L CGH C D+ ++++ TCP CK IR
Sbjct: 284 LPCGHHFHCACIDKWLHINATCPLCKFNIR 313
>UniRef50_Q9VY98 Cluster: CG9941-PA; n=5; Drosophila|Rep: CG9941-PA
- Drosophila melanogaster (Fruit fly)
Length = 789
Score = 33.5 bits (73), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 744 LHCGHSCLCTDCDETVNVD-NTCPKCKSGIRYKLKYKTL 631
L C H CLC C +++ N CP C++ R L+ + +
Sbjct: 332 LPCRHLCLCNSCADSLRYQANNCPICRAPFRALLQIRAV 370
>UniRef50_Q4D0Q3 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 373
Score = 33.5 bits (73), Expect = 5.9
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = -1
Query: 759 PAVTYLHCGHSCLCTDCDETVNVDN----TCPKCKSGI 658
P+VT+L C H+C C C + TCP C++ I
Sbjct: 320 PSVTFLPCYHTCCCETCSNKLRPTRGDVLTCPFCRTKI 357
>UniRef50_Q1RPV4 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 612
Score = 33.5 bits (73), Expect = 5.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 753 VTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLK 643
+ + CGH C+C C + N CP C+ I+ K++
Sbjct: 575 IAFNPCGHLCVCQSCSPRL---NACPICRRPIQQKIR 608
>UniRef50_Q17FY8 Cluster: Mahogunin; n=5; Endopterygota|Rep:
Mahogunin - Aedes aegypti (Yellowfever mosquito)
Length = 415
Score = 33.5 bits (73), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 744 LHCGHSCLCTDCDETVNVD-NTCPKCKSGIRYKLKYKTL 631
L C H CLC C +++ N CP C++ R L+ + +
Sbjct: 287 LPCRHLCLCNSCADSLRYQANNCPICRAPFRALLQIRAV 325
>UniRef50_A2FJR6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 95
Score = 33.5 bits (73), Expect = 5.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 753 VTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 658
+TY C H+C+C +C + + + CP C+ I
Sbjct: 55 ITY-PCSHACMCYECFKALPIPKQCPVCRKYI 85
>UniRef50_A0E3S1 Cluster: Chromosome undetermined scaffold_77, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_77,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 451
Score = 33.5 bits (73), Expect = 5.9
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 759 PAVTYLHCGHSCLCTDCDET-VNVDNTCPKCKSGIRYKLK 643
P V C H +C +C E + C C+S IRY LK
Sbjct: 395 PDVVLHPCNHGGICNNCSENMIKTTKQCFLCRSEIRYALK 434
>UniRef50_UPI00006CA9E3 Cluster: hypothetical protein
TTHERM_00326920; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00326920 - Tetrahymena
thermophila SB210
Length = 3474
Score = 33.1 bits (72), Expect = 7.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 735 GHSCLCTDCDETVNVDNTCPKCKSGI 658
G+ +C DC ET+N+ N CK+GI
Sbjct: 279 GNKDICLDCQETMNISNGTCVCKNGI 304
>UniRef50_Q06VJ9 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 565
Score = 33.1 bits (72), Expect = 7.8
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = -1
Query: 738 CGHSCLCTDCDETVNVDNT----CPKCKSGIRYKLKYKTL 631
CGH C C DC + + ++ CP CKS +K K +
Sbjct: 524 CGHMCFCIDCANKIILSSSEKQQCPYCKSPCMTIIKIKQM 563
>UniRef50_A4M5P7 Cluster: Putative uncharacterized protein
precursor; n=1; Petrotoga mobilis SJ95|Rep: Putative
uncharacterized protein precursor - Petrotoga mobilis
SJ95
Length = 124
Score = 33.1 bits (72), Expect = 7.8
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -2
Query: 431 IKINFLTKKIIN---VYNKTEMCIRATFDGRYVVTHDILMCFVNKSYVKQLLRGVDTCIT 261
I +N KK IN VY K E ++ T +G Y +T+D +N Y+ Q +R D+
Sbjct: 23 IFMNAFPKKGINGAEVYLKGEQILQITKEGTYSITNDEGELLMNVEYIDQRIRVTDSSCP 82
Query: 260 LQ 255
L+
Sbjct: 83 LK 84
>UniRef50_Q8VX96 Cluster: Putative RING zinc finger protein; n=1;
Pinus pinaster|Rep: Putative RING zinc finger protein -
Pinus pinaster (Maritime pine)
Length = 80
Score = 33.1 bits (72), Expect = 7.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 753 VTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 658
V ++ CGH C CT C + + CP C+ I
Sbjct: 43 VVFVPCGHMCCCTSCSSRL---SECPLCRGDI 71
>UniRef50_Q7QVP2 Cluster: GLP_305_8339_7131; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_305_8339_7131 - Giardia lamblia ATCC
50803
Length = 402
Score = 33.1 bits (72), Expect = 7.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 756 AVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 658
++ ++ CGH C C CD ++ CP C+ I
Sbjct: 363 SIVFIPCGHFCTCRVCDRSL-TRRQCPICRKNI 394
>UniRef50_Q5DFJ2 Cluster: SJCHGC09572 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09572 protein - Schistosoma
japonicum (Blood fluke)
Length = 137
Score = 33.1 bits (72), Expect = 7.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 747 YLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLK 643
+L CGH C C C +V +D CP C+S I +++
Sbjct: 103 FLPCGHVCCCKTCSGSV-MD--CPLCRSNIHNRIQ 134
>UniRef50_Q7M3S9 Cluster: RING finger protein B; n=2; Dictyostelium
discoideum|Rep: RING finger protein B - Dictyostelium
discoideum (Slime mold)
Length = 943
Score = 33.1 bits (72), Expect = 7.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 759 PAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKL 646
P + L C HS LC+DC + CP C+S I K+
Sbjct: 905 PNIVLLPCRHSSLCSDCCSKL---TKCPICRSHIENKI 939
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,374,906
Number of Sequences: 1657284
Number of extensions: 12285813
Number of successful extensions: 32981
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 31293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32946
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -