Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc18e03
         (663 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K03515-1|AAA36368.1|  558|Homo sapiens neuroleukin protein.           239   6e-63
BC006342-1|AAH06342.4|  289|Homo sapiens GPI protein protein.         239   6e-63
BC004982-1|AAH04982.1|  558|Homo sapiens glucose phosphate isome...   239   6e-63
AY324386-1|AAP72966.1|  558|Homo sapiens glucose phosphate isome...   239   6e-63
AF187554-1|AAF22645.1|  558|Homo sapiens sperm antigen-36 protein.    237   3e-62
BC042482-1|AAH42482.1|  288|Homo sapiens KCTD7 protein protein.        31   4.9  
AK056631-1|BAB71236.1|  289|Homo sapiens protein ( Homo sapiens ...    31   4.9  

>K03515-1|AAA36368.1|  558|Homo sapiens neuroleukin protein.
          Length = 558

 Score =  239 bits (585), Expect = 6e-63
 Identities = 106/143 (74%), Positives = 126/143 (88%)
 Frame = -1

Query: 663 PAQTHNPISNGVHHKILLXNFLAQTEALMKGKTADEAKAELEKSGMAPEAIDKILPHKVF 484
           P QT +PI  G+HHKILL NFLAQTEALM+GK+ +EA+ EL+ +G +PE ++++LPHKVF
Sbjct: 409 PVQTQHPIRKGLHHKILLANFLAQTEALMRGKSTEEARKELQAAGKSPEDLERLLPHKVF 468

Query: 483 KGNRPTNSIVLKKITPFTLGALIAMYEHKIFTQGVIWDINSYDQWGVELGKQLAKAIEPE 304
           +GNRPTNSIV  K+TPF LGAL+AMYEHKIF QG+IWDINS+DQWGVELGKQLAK IEPE
Sbjct: 469 EGNRPTNSIVFTKLTPFMLGALVAMYEHKIFVQGIIWDINSFDQWGVELGKQLAKKIEPE 528

Query: 303 LQGSAAVTSHDASTNGLINFLKK 235
           L GSA VTSHDASTNGLINF+K+
Sbjct: 529 LDGSAQVTSHDASTNGLINFIKQ 551


>BC006342-1|AAH06342.4|  289|Homo sapiens GPI protein protein.
          Length = 289

 Score =  239 bits (585), Expect = 6e-63
 Identities = 106/143 (74%), Positives = 126/143 (88%)
 Frame = -1

Query: 663 PAQTHNPISNGVHHKILLXNFLAQTEALMKGKTADEAKAELEKSGMAPEAIDKILPHKVF 484
           P QT +PI  G+HHKILL NFLAQTEALM+GK+ +EA+ EL+ +G +PE ++++LPHKVF
Sbjct: 140 PVQTQHPIRKGLHHKILLANFLAQTEALMRGKSTEEARKELQAAGKSPEDLERLLPHKVF 199

Query: 483 KGNRPTNSIVLKKITPFTLGALIAMYEHKIFTQGVIWDINSYDQWGVELGKQLAKAIEPE 304
           +GNRPTNSIV  K+TPF LGAL+AMYEHKIF QG+IWDINS+DQWGVELGKQLAK IEPE
Sbjct: 200 EGNRPTNSIVFTKLTPFMLGALVAMYEHKIFVQGIIWDINSFDQWGVELGKQLAKKIEPE 259

Query: 303 LQGSAAVTSHDASTNGLINFLKK 235
           L GSA VTSHDASTNGLINF+K+
Sbjct: 260 LDGSAQVTSHDASTNGLINFIKQ 282


>BC004982-1|AAH04982.1|  558|Homo sapiens glucose phosphate
           isomerase protein.
          Length = 558

 Score =  239 bits (585), Expect = 6e-63
 Identities = 106/143 (74%), Positives = 126/143 (88%)
 Frame = -1

Query: 663 PAQTHNPISNGVHHKILLXNFLAQTEALMKGKTADEAKAELEKSGMAPEAIDKILPHKVF 484
           P QT +PI  G+HHKILL NFLAQTEALM+GK+ +EA+ EL+ +G +PE ++++LPHKVF
Sbjct: 409 PVQTQHPIRKGLHHKILLANFLAQTEALMRGKSTEEARKELQAAGKSPEDLERLLPHKVF 468

Query: 483 KGNRPTNSIVLKKITPFTLGALIAMYEHKIFTQGVIWDINSYDQWGVELGKQLAKAIEPE 304
           +GNRPTNSIV  K+TPF LGAL+AMYEHKIF QG+IWDINS+DQWGVELGKQLAK IEPE
Sbjct: 469 EGNRPTNSIVFTKLTPFMLGALVAMYEHKIFVQGIIWDINSFDQWGVELGKQLAKKIEPE 528

Query: 303 LQGSAAVTSHDASTNGLINFLKK 235
           L GSA VTSHDASTNGLINF+K+
Sbjct: 529 LDGSAQVTSHDASTNGLINFIKQ 551


>AY324386-1|AAP72966.1|  558|Homo sapiens glucose phosphate
           isomerase protein.
          Length = 558

 Score =  239 bits (585), Expect = 6e-63
 Identities = 106/143 (74%), Positives = 126/143 (88%)
 Frame = -1

Query: 663 PAQTHNPISNGVHHKILLXNFLAQTEALMKGKTADEAKAELEKSGMAPEAIDKILPHKVF 484
           P QT +PI  G+HHKILL NFLAQTEALM+GK+ +EA+ EL+ +G +PE ++++LPHKVF
Sbjct: 409 PVQTQHPIRKGLHHKILLANFLAQTEALMRGKSTEEARKELQAAGKSPEDLERLLPHKVF 468

Query: 483 KGNRPTNSIVLKKITPFTLGALIAMYEHKIFTQGVIWDINSYDQWGVELGKQLAKAIEPE 304
           +GNRPTNSIV  K+TPF LGAL+AMYEHKIF QG+IWDINS+DQWGVELGKQLAK IEPE
Sbjct: 469 EGNRPTNSIVFTKLTPFMLGALVAMYEHKIFVQGIIWDINSFDQWGVELGKQLAKKIEPE 528

Query: 303 LQGSAAVTSHDASTNGLINFLKK 235
           L GSA VTSHDASTNGLINF+K+
Sbjct: 529 LDGSAQVTSHDASTNGLINFIKQ 551


>AF187554-1|AAF22645.1|  558|Homo sapiens sperm antigen-36 protein.
          Length = 558

 Score =  237 bits (579), Expect = 3e-62
 Identities = 104/143 (72%), Positives = 126/143 (88%)
 Frame = -1

Query: 663 PAQTHNPISNGVHHKILLXNFLAQTEALMKGKTADEAKAELEKSGMAPEAIDKILPHKVF 484
           P QT +PI  G+HHKIL+ NFLAQTEA+M+GK+ +EA+ EL+ +G +PE ++++LPHKVF
Sbjct: 409 PVQTQHPIRKGLHHKILVANFLAQTEAVMRGKSTEEARKELQAAGKSPEDLERLLPHKVF 468

Query: 483 KGNRPTNSIVLKKITPFTLGALIAMYEHKIFTQGVIWDINSYDQWGVELGKQLAKAIEPE 304
           +GNRPTNSIV  K+TPF LGAL+AMYEHKIF QG+IWDINS+DQWGVELGKQLAK IEPE
Sbjct: 469 EGNRPTNSIVFTKLTPFMLGALVAMYEHKIFVQGIIWDINSFDQWGVELGKQLAKKIEPE 528

Query: 303 LQGSAAVTSHDASTNGLINFLKK 235
           L GSA VTSHDASTNGLINF+K+
Sbjct: 529 LDGSAQVTSHDASTNGLINFIKQ 551


>BC042482-1|AAH42482.1|  288|Homo sapiens KCTD7 protein protein.
          Length = 288

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +3

Query: 570 CPS-SGLRFEPRNXLEGSCGEHHSKLDCGFGP 662
           CP  + LRFE R+  +G   EHH ++D  FGP
Sbjct: 204 CPLLNSLRFE-RSESDGQLFEHHCEVDVSFGP 234


>AK056631-1|BAB71236.1|  289|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32069 fis, clone OCBBF1000118, weakly similar to
           TUMOR NECROSIS FACTOR, ALPHA-INDUCED PROTEIN 1,
           ENDOTHELIAL. ).
          Length = 289

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +3

Query: 570 CPS-SGLRFEPRNXLEGSCGEHHSKLDCGFGP 662
           CP  + LRFE R+  +G   EHH ++D  FGP
Sbjct: 204 CPLLNSLRFE-RSESDGQLFEHHCEVDVSFGP 234


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,386,455
Number of Sequences: 237096
Number of extensions: 2095969
Number of successful extensions: 3711
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3709
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)