Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18e01
(342 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 80 1e-14
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 79 3e-14
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 77 1e-13
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 73 1e-12
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 59 2e-08
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 56 1e-07
UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba h... 55 3e-07
UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15; Therm... 48 5e-05
UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeu... 39 0.025
UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5; Archae... 36 0.13
UniRef50_Q3AV77 Cluster: Possible peptidase S26 family protein; ... 35 0.31
UniRef50_O59603 Cluster: 50S ribosomal protein L44E; n=15; Eurya... 35 0.41
UniRef50_Q4T3I8 Cluster: Chromosome undetermined SCAF10033, whol... 33 1.7
UniRef50_UPI0000DB703D Cluster: PREDICTED: similar to ubiquitin ... 32 2.2
UniRef50_Q00TJ9 Cluster: Chromosome 17 contig 1, DNA sequence; n... 32 2.2
UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1; ... 32 2.2
UniRef50_P39940 Cluster: E3 ubiquitin-protein ligase RSP5; n=31;... 32 2.9
UniRef50_Q5CQT1 Cluster: Large low complexity protein with signa... 31 3.8
UniRef50_UPI0000549DB6 Cluster: PREDICTED: similar to serine-thr... 31 5.0
UniRef50_Q01W43 Cluster: Peptidase M50; n=1; Solibacter usitatus... 31 5.0
UniRef50_Q620M3 Cluster: Putative uncharacterized protein CBG027... 31 5.0
UniRef50_Q3S1L0 Cluster: Putative uncharacterized protein Tb09.2... 31 5.0
UniRef50_Q4SVF2 Cluster: Chromosome 7 SCAF13760, whole genome sh... 31 6.7
UniRef50_A4T277 Cluster: HNH nuclease; n=1; Mycobacterium gilvum... 31 6.7
UniRef50_Q94QP8 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 31 6.7
UniRef50_Q174M7 Cluster: Transient receptor potential cation cha... 31 6.7
UniRef50_Q0V3K3 Cluster: Predicted protein; n=1; Phaeosphaeria n... 31 6.7
UniRef50_Q6XLV7 Cluster: FirrV-1-E5; n=1; Feldmannia irregularis... 30 8.8
UniRef50_Q2H2H8 Cluster: Predicted protein; n=1; Chaetomium glob... 30 8.8
UniRef50_A6RQI4 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_Q9WRL5 Cluster: Glycoprotein B precursor; n=5; Betaherp... 30 8.8
UniRef50_Q9UK17 Cluster: Potassium voltage-gated channel subfami... 30 8.8
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 79.8 bits (188), Expect = 1e-14
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = -3
Query: 298 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 119
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 118 XXXXKIVLRLE 86
KIVLRLE
Sbjct: 61 KTTKKIVLRLE 71
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 78.6 bits (185), Expect = 3e-14
Identities = 41/71 (57%), Positives = 46/71 (64%)
Frame = -3
Query: 298 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 119
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 118 XXXXKIVLRLE 86
KIVLRLE
Sbjct: 61 KTTKKIVLRLE 71
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 76.6 bits (180), Expect = 1e-13
Identities = 44/86 (51%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = -3
Query: 298 MVNVPKQRRTYXXXXXXXXXXXV-SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 122
MVNVPK RRT+ +QYKK KE AQGRRRYDRKQ G+GGQ+KPIF
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKK 60
Query: 121 XXXXXKIVLRLEVCRLQGEIHRLPLK 44
KIVLR+E C +LP+K
Sbjct: 61 AKTTKKIVLRME-CTECKHKKQLPIK 85
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 72.9 bits (171), Expect = 1e-12
Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = -3
Query: 295 VNVPKQRRTYXXXXXXXXXXXV--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 122
VNVPK ++TY +QYKK K+ AAQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 48 VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 107
Query: 121 XXXXXKIVLRLEVCRLQGEIHRLPLK 44
KIVLRL+ C+ + + P+K
Sbjct: 108 AKTTKKIVLRLQ-CQGCKHVSQHPIK 132
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 58.8 bits (136), Expect = 2e-08
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = -3
Query: 298 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIF--XX 125
MV P+ ++ Y +YK K AQG+RRYDRKQQGYGGQ+KP+F
Sbjct: 1 MVKYPRNQKKYCKFCKVHVEMKSYEYKPGKASLNAQGKRRYDRKQQGYGGQTKPVFRKQV 60
Query: 124 XXXXXXKIVLRLEVCR 77
I L E+C+
Sbjct: 61 KNTKKPSIKLSCEICK 76
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 56.4 bits (130), Expect = 1e-07
Identities = 30/69 (43%), Positives = 40/69 (57%)
Frame = -3
Query: 298 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 119
MV+ PK ++ + VSQ + +ERH+A GRRRYDRKQ+G+GG+ KPI
Sbjct: 1 MVHHPKTKKFFCKFCKKHTMCKVSQASRGEERHSALGRRRYDRKQKGFGGRVKPILRRSK 60
Query: 118 XXXXKIVLR 92
KI LR
Sbjct: 61 KTSKKISLR 69
>UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba
histolytica|Rep: Ribosomal protein L44 - Entamoeba
histolytica
Length = 80
Score = 55.2 bits (127), Expect = 3e-07
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = -3
Query: 226 QYKKSKERHAAQGRRRYDRKQQGYGGQSKPIF 131
QYKK K+ QG+RRYDRKQQG+GGQ+KP+F
Sbjct: 9 QYKKGKDSLHVQGKRRYDRKQQGFGGQTKPVF 40
>UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15;
Thermoprotei|Rep: 50S ribosomal protein L44E - Aeropyrum
pernix
Length = 95
Score = 47.6 bits (108), Expect = 5e-05
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = -3
Query: 286 PKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKP 137
PK+ RTY V+QY+ K R A G RRY RKQ+GYG Q +P
Sbjct: 4 PKRIRTYCPRCNTHTEHRVAQYRAGKRRAMALGERRYRRKQEGYGSQRRP 53
>UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L44E - Cenarchaeum
symbiosum
Length = 93
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = -3
Query: 286 PKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKP 137
PKQ R Y VS YK K R +A G RR+ ++GYGGQ P
Sbjct: 4 PKQIRRYCPKCKKHTTQKVSIYKAGKRRASAIGERRHAEDKKGYGGQKFP 53
>UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5;
Archaea|Rep: 50S ribosomal protein L44E - Thermoplasma
acidophilum
Length = 93
Score = 36.3 bits (80), Expect = 0.13
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = -3
Query: 295 VNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXX 116
+ +PK+ TY V + +K K G+RR+ R GYGG +P F
Sbjct: 1 MKMPKKIMTYCPYCKKHTSHSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKFEGREK 60
Query: 115 XXXKIVLRLEVC 80
+I LRL VC
Sbjct: 61 PTKRIALRL-VC 71
>UniRef50_Q3AV77 Cluster: Possible peptidase S26 family protein;
n=2; Synechococcus|Rep: Possible peptidase S26 family
protein - Synechococcus sp. (strain CC9902)
Length = 127
Score = 35.1 bits (77), Expect = 0.31
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -1
Query: 225 STKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRRQKPLRKL 100
ST S + G +PR + +V SRVT NPS+K QK +L
Sbjct: 80 STDSRQLGPIPRSALIGVVTSRVTPAKKNPSTKTNQKSQNQL 121
>UniRef50_O59603 Cluster: 50S ribosomal protein L44E; n=15;
Euryarchaeota|Rep: 50S ribosomal protein L44E -
Pyrococcus horikoshii
Length = 94
Score = 34.7 bits (76), Expect = 0.41
Identities = 24/76 (31%), Positives = 33/76 (43%)
Frame = -3
Query: 286 PKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXX 107
PKQ RTY V + K+ + G+RR+ R +GYGG +P
Sbjct: 4 PKQIRTYCPYCKRHTIHKVERVKRRPRSELSAGQRRFRRVLKGYGGFPRPKPEGREKPVK 63
Query: 106 KIVLRLEVCRLQGEIH 59
K+ LR VC + G H
Sbjct: 64 KLDLRF-VCTVCGRAH 78
>UniRef50_Q4T3I8 Cluster: Chromosome undetermined SCAF10033, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10033,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1494
Score = 32.7 bits (71), Expect = 1.7
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 88 QDGAQFS*WFLPSF*RWVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 243
++G F P W+W D+ N + D N+F F W C+ IP L
Sbjct: 49 ENGKDFRFDVSPDLLEWIWHDN-NQFLQDKNIFEHTYFGFMWQLCSSIPSSL 99
>UniRef50_UPI0000DB703D Cluster: PREDICTED: similar to ubiquitin
specific protease 34; n=1; Apis mellifera|Rep: PREDICTED:
similar to ubiquitin specific protease 34 - Apis
mellifera
Length = 3414
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +1
Query: 136 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVLCGIYIFCSTSCAVLVRSPFLSSF 312
W+W D+ + + D N+F F W C IP L I + A L S F+ +F
Sbjct: 2236 WIWQDNMH-FLQDKNIFEHTYFTFMWQICGYIPQTLFSIQSDITEMSADLSTSFFMETF 2293
>UniRef50_Q00TJ9 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 66
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +3
Query: 204 LSLDFLYCDTLCTLWHLHFLQYVLRCFGTF 293
L+L LYC TLC LH LQ V FGT+
Sbjct: 5 LALPVLYCVTLCAECFLHPLQNVFLDFGTY 34
>UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 594
Score = 32.3 bits (70), Expect = 2.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 217 FCTVIPCVLCGIYIFCSTSC 276
F T+IPC C + +FCST C
Sbjct: 244 FLTLIPCKCCTVTMFCSTKC 263
>UniRef50_P39940 Cluster: E3 ubiquitin-protein ligase RSP5; n=31;
Dikarya|Rep: E3 ubiquitin-protein ligase RSP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 809
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 282 NSAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVM 175
N++ T N ++T TR HST P +GT VE +
Sbjct: 158 NTSSTTRTNGHSTSSTRNHSTSHPSRGTAQAVESTL 193
>UniRef50_Q5CQT1 Cluster: Large low complexity protein with signal
peptide, within large locus of signal peptide containing
proteins; n=3; Cryptosporidium|Rep: Large low complexity
protein with signal peptide, within large locus of
signal peptide containing proteins - Cryptosporidium
parvum Iowa II
Length = 2929
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = -1
Query: 285 QNSAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKR 124
+ S G ++N N + + HS + P+K LP+ ++ + + + +P +KR
Sbjct: 357 ETSEGEVSENENGKRNNKRHSKRRPKKPKLPKKWEIFTDDEKQEWLDRHPRTKR 410
>UniRef50_UPI0000549DB6 Cluster: PREDICTED: similar to
serine-threonine specific protein phosphatase; n=3;
Danio rerio|Rep: PREDICTED: similar to serine-threonine
specific protein phosphatase - Danio rerio
Length = 297
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -1
Query: 216 SPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRRQKPLRKLCSVLRCADCKVRF 61
SP+ G++P +D +I P P +RR K L C + +VRF
Sbjct: 51 SPKAGSVPPPQDAVIRRRLSCEPEPKPIMRRRAKSLSSSSDRQTCRNIQVRF 102
>UniRef50_Q01W43 Cluster: Peptidase M50; n=1; Solibacter usitatus
Ellin6076|Rep: Peptidase M50 - Solibacter usitatus
(strain Ellin6076)
Length = 321
Score = 31.1 bits (67), Expect = 5.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 139 VWTDHRNPAVYDHNVFYPGQRAFPW 213
+W R+P++YD + PG+R W
Sbjct: 277 LWLGRRHPSIYDSTILSPGRRKLGW 301
>UniRef50_Q620M3 Cluster: Putative uncharacterized protein CBG02733;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG02733 - Caenorhabditis
briggsae
Length = 1157
Score = 31.1 bits (67), Expect = 5.0
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = -1
Query: 246 TKYTRY--HSTKSPRKGTLPRVEDVMIVNSRVTVVSP---NPSSKRRQKPLRKLCSVL 88
T+YTR +T + KG +PR ED +++ + V+SP + S+ R L KL L
Sbjct: 212 TQYTRTTKKTTYTISKGVIPRYEDPVVLRKQTRVMSPHYFSTSNLHRNDELPKLSETL 269
>UniRef50_Q3S1L0 Cluster: Putative uncharacterized protein
Tb09.211.2400; n=2; Trypanosoma brucei|Rep: Putative
uncharacterized protein Tb09.211.2400 - Trypanosoma
brucei brucei
Length = 661
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -1
Query: 186 EDVMIVNSRVTVVSPNPSSKRRQKPLRKL-CSVLRCADCKVRFTGCH 49
+D M+V++ V S R P+R C+ L+C DC+ GCH
Sbjct: 447 KDEMVVDNPVITTKCPISQARISIPIRGAHCAHLQCFDCRSFLQGCH 493
>UniRef50_Q4SVF2 Cluster: Chromosome 7 SCAF13760, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 7 SCAF13760, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 103
Score = 30.7 bits (66), Expect = 6.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 201 CLSLDFLYCDTLCTLWHLHFL 263
C S D L+C +C WH+ +L
Sbjct: 70 CCSFDALFCILMCVFWHVRYL 90
>UniRef50_A4T277 Cluster: HNH nuclease; n=1; Mycobacterium gilvum
PYR-GCK|Rep: HNH nuclease - Mycobacterium gilvum PYR-GCK
Length = 550
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 156 TVVSPNPSSKR-RQKPLRKLCSVLRCADCKVRFTGC 52
T++ P + R +P RKL +RC D RF GC
Sbjct: 384 TLIHPGQAPPEPRYRPSRKLADFVRCRDQTCRFPGC 419
>UniRef50_Q94QP8 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=5; Bilateria|Rep: NADH-ubiquinone oxidoreductase chain
5 - Inversidens japanensis
Length = 588
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 198 ACLSLDFLYCDTLCTLWHLHFLQYVLRC-FGTFTIFEFVRHDINK 329
ACL LD L TL HL F+ YVL + ++F + H + K
Sbjct: 271 ACLELDIKKLVALSTLSHLGFMVYVLGVGYPVLSVFHLLSHALFK 315
>UniRef50_Q174M7 Cluster: Transient receptor potential cation
channel protein painless; n=2; Aedes aegypti|Rep:
Transient receptor potential cation channel protein
painless - Aedes aegypti (Yellowfever mosquito)
Length = 914
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 183 LLPWAACLSLDFLYCDTLCTLWHLHFLQYVLRCFGTFTIFEFVRHDI 323
L+ W LSL F +CT + L F YV+ C+G + +F++ +
Sbjct: 495 LIKWLR-LSLYFYINFVICTCFFLCFTWYVVGCYGQDNVDQFLKESL 540
>UniRef50_Q0V3K3 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 2460
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -1
Query: 276 AGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRR 121
A RT ++ NA +SPR +LPR D IV+ SP +RR
Sbjct: 1853 ADRTLESENADLPAPEPIVESPRDESLPRERDFAIVDGPAVESSPREKQRRR 1904
>UniRef50_Q6XLV7 Cluster: FirrV-1-E5; n=1; Feldmannia irregularis
virus a|Rep: FirrV-1-E5 - Feldmannia irregularis virus a
Length = 128
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -1
Query: 237 TRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRR 121
TR +TKS R +P + +M R+ +++ PS+K+R
Sbjct: 4 TRSMATKSRRTAPMPTYDQLMAHAKRIALITKPPSAKKR 42
>UniRef50_Q2H2H8 Cluster: Predicted protein; n=1; Chaetomium
globosum|Rep: Predicted protein - Chaetomium globosum
(Soil fungus)
Length = 236
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 10 TTGASKVALQSPSMATCESHLAIGTPQDGAQFS*WFLPSF 129
T GA K + P AT S + TP++GA S W +F
Sbjct: 102 TEGAGKEGYRCPGNATVTSCCSAATPREGASQSSWISQNF 141
>UniRef50_A6RQI4 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 226
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 216 SPRKGTLPRVEDVMIVNSRVTVVSPNPSSKR 124
S ++ LP ED+ I N V V+ P P +KR
Sbjct: 88 SAKEPLLPGDEDIQIDNGNVEVIDPQPKTKR 118
>UniRef50_Q9WRL5 Cluster: Glycoprotein B precursor; n=5;
Betaherpesvirinae|Rep: Glycoprotein B precursor -
Tupaiid herpesvirus (strain 2) (TuHV-2) (Herpesvirus
tupaia (strain2))
Length = 944
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 2 SWSPPEPQRWXCNLLQWQPVNLTLQSAHLKTEHNFLSGFCLLF 130
+W EP+ C+L W+ VN +++ H + H G F
Sbjct: 361 AWEIKEPKNVTCHLALWETVNRAIRTEHATSFHFVSRGLTATF 403
>UniRef50_Q9UK17 Cluster: Potassium voltage-gated channel subfamily
D member 3; n=93; Eumetazoa|Rep: Potassium voltage-gated
channel subfamily D member 3 - Homo sapiens (Human)
Length = 655
Score = 30.3 bits (65), Expect = 8.8
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 75 NRHTSRRSTIFLVVFAFFLKMGL---D*PP*PC-CLRS*RLLPWAACLSLDFLYCDTLCT 242
N HTS + +F V FF+ + + PC + + LP S+ F DT C
Sbjct: 175 NPHTSTLALVFYYVTGFFIAVSVITNVVETVPCGTVPGSKELPCGERYSVAFFCLDTACV 234
Query: 243 LWHLHFLQYVLRCFGTFTIFEFVR 314
+ + ++Y+LR F + + F+R
Sbjct: 235 M--IFTVEYLLRLFAAPSRYRFIR 256
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 336,951,826
Number of Sequences: 1657284
Number of extensions: 6268224
Number of successful extensions: 16715
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 16372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16709
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10275329640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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