Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18d21
(734 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 70 4e-13
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 59 6e-10
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 56 7e-09
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 49 6e-07
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 47 3e-06
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 46 4e-06
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 46 6e-06
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 44 2e-05
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 37 0.003
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 36 0.008
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 33 0.032
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 31 0.13
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 30 0.30
SPAC5D6.05 |sep11|pmc6, med18|mediator complex subunit Pmc6 |Sch... 29 0.69
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 27 3.7
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 27 3.7
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 27 3.7
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 26 4.8
SPBC1703.07 |||ATP citrate synthase subunit 1 |Schizosaccharomyc... 25 8.5
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 69.7 bits (163), Expect = 4e-13
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 6/102 (5%)
Frame = -3
Query: 645 ERVHSGEKPFSCTF--CDYKSGQKNNVAKHILVHMKEKPFRCQY--CNYRCAQKNNLVVH 478
+ + S +K F C + C K + + + +H+ H E+PF C Y C+ +K++L +H
Sbjct: 14 KNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIH 73
Query: 477 ERTHTGFKPFACSY--CAYRTVQKPNLVKHMYLHTNQKPFSC 358
+R HT KPF+C Y C + + +L +H+ +H KP++C
Sbjct: 74 KRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYAC 115
Score = 66.1 bits (154), Expect = 5e-12
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Frame = -3
Query: 699 GCTQCSYRCQSPAILKIHERVHSGEKPFSCTF--CDYKSGQKNNVAKHILVHMKEKPFRC 526
GC++ YR + LKIH+R H+ KPFSC + CD + + ++ +HI VH K KP+ C
Sbjct: 59 GCSKAFYR---KSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYAC 115
Query: 525 QY--CNYRCAQKNNLVVH-ERTHTGFKPFACSY--CAYRTVQKPNLVKHM-YLHTNQKPF 364
+ C+ ++ L H HT P+ C+Y C R K L H+ H +
Sbjct: 116 TWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISY 175
Query: 363 SC 358
SC
Sbjct: 176 SC 177
Score = 65.7 bits (153), Expect = 6e-12
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Frame = -3
Query: 690 QCSYRCQSPAILKIHERVHSGEKPFSC--TFCDYKSGQKNNVAKHILVHMKEKPFRCQY- 520
+C + P++L+ H R HS E+PF C T C +K+++ H H KPF C Y
Sbjct: 29 ECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYD 88
Query: 519 -CNYRCAQKNNLVVHERTHTGFKPFACSY--CAYRTVQKPNLVKHM-YLHTNQKPFSC-- 358
C+ + + +L H H KP+AC++ C + L H+ HT+ P+ C
Sbjct: 89 GCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTY 148
Query: 357 DQCNYRCVQKTNLTKH 310
C R K L H
Sbjct: 149 QDCELRFATKQKLQNH 164
Score = 37.5 bits (83), Expect = 0.002
Identities = 30/137 (21%), Positives = 53/137 (38%), Gaps = 3/137 (2%)
Frame = -3
Query: 699 GCTQCSYRCQSPAILKIHERVHSGEKPFSCTFCDYKSGQKNNVAKHI---LVHMKEKPFR 529
GC + R S A+ K +H G F C C K G K+ + +H+ KP+
Sbjct: 242 GCKKSFTR--SSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPY- 298
Query: 528 CQYCNYRCAQKNNLVVHERTHTGFKPFACSYCAYRTVQKPNLVKHMYLHTNQKPFSCDQC 349
C + + +H++ S A + + + + H Y + S +C
Sbjct: 299 INECGIKHDGIEGVAIHDQKEKELSSNLVSDVAKKIINE--VTGHGYKEAREYSCSFPEC 356
Query: 348 NYRCVQKTNLTKHKLRH 298
NYR + ++ +H H
Sbjct: 357 NYRFKRLYDMHRHLNSH 373
Score = 30.7 bits (66), Expect = 0.23
Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 11/151 (7%)
Frame = -3
Query: 702 FGCT--QCSYRCQSPAILKIH-ERVHSGEKPFSCTFCDYKSGQKNNVAKHILVHMKEKPF 532
+ CT C R + L+ H R H +SC + + H++E
Sbjct: 144 YPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAHV 203
Query: 531 -RCQYCN--YRCAQ--KNNLVVHERTHTGFKPFACSY--CAYRTVQKPNLVKHM-YLHTN 376
C C ++ A ++++V+H+ T K + C C + L KH+ +H
Sbjct: 204 PSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEG 263
Query: 375 QKPFSCDQCNYRCVQKTNLTKHKLRHLNEKS 283
F CD C + K L +H R +K+
Sbjct: 264 NMAFHCDSCGTKFGYKHMLQRHLERGTCKKA 294
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 59.3 bits (137), Expect = 6e-10
Identities = 26/70 (37%), Positives = 36/70 (51%)
Frame = -3
Query: 519 CNYRCAQKNNLVVHERTHTGFKPFACSYCAYRTVQKPNLVKHMYLHTNQKPFSCDQCNYR 340
CN R + NL H THT ++PF CS C ++ + +H LHT K F+C CN R
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 339 CVQKTNLTKH 310
+ L +H
Sbjct: 637 FARMDALNRH 646
Score = 54.4 bits (125), Expect = 2e-08
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = -3
Query: 618 FSCTF--CDYKSGQKNNVAKHILVHMKEKPFRCQYCNYRCAQKNNLVVHERTHTGFKPFA 445
+ CTF C+ + + N+ H+ H +PF+C C A++++ HE+ HTG K FA
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFA 629
Query: 444 CSYCAYRTVQKPNLVKH 394
C C R + L +H
Sbjct: 630 CVTCNQRFARMDALNRH 646
Score = 50.8 bits (116), Expect = 2e-07
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = -3
Query: 729 EGEKDRAGKFGCT--QCSYRCQSPAILKIHERVHSGEKPFSCTFCDYKSGQKNNVAKHIL 556
+ E G + CT C+ R LK H H+ +PF C+ C ++++ +H
Sbjct: 561 KSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQ 620
Query: 555 VHMKEKPFRCQYCNYRCAQKNNLVVHERTHTG 460
+H K F C CN R A+ + L H ++ G
Sbjct: 621 LHTGIKAFACVTCNQRFARMDALNRHYKSEVG 652
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -3
Query: 450 FACSY--CAYRTVQKPNLVKHMYLHTNQKPFSCDQCNYRCVQKTNLTKHKLRHLNEKS 283
+ C++ C R + NL HM HTN +PF C C ++ + +H+ H K+
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKA 627
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 55.6 bits (128), Expect = 7e-09
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = -3
Query: 528 CQY--CNYRCAQKNNLVVHERTHTGFKPFACSYCAYRTVQKPNLVKHMYLHTNQKPFSCD 355
C Y CN R A+K N+ H +TH +P+ C C V+ +L +H+ +H N +P+ C
Sbjct: 445 CLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC- 503
Query: 354 QCNYRCVQKTNLTKHKLRHL 295
+C R + L +HK R++
Sbjct: 504 ECLKRFNRLDALNRHKQRNI 523
Score = 47.6 bits (108), Expect = 2e-06
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = -3
Query: 603 CDYKSGQKNNVAKHILVHMKEKPFRCQYCNYRCAQKNNLVVHERTHTGFKPFACSYCAYR 424
C+ + +K NV HI H+ ++P+RC C + ++L H R H +P+ C C R
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 423 TVQKPNLVKH 394
+ L +H
Sbjct: 509 FNRLDALNRH 518
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 450 FACSY--CAYRTVQKPNLVKHMYLHTNQKPFSCDQCNYRCVQKTNLTKHKLRHLN 292
+ C Y C R +K N+ H+ H + +P+ CD C V+ +L +H H N
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHEN 497
Score = 36.3 bits (80), Expect = 0.005
Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -3
Query: 708 GKFGCTQ--CSYRCQSPAILKIHERVHSGEKPFSCTFCDYKSGQKNNVAKHILVHMKEKP 535
GK+ C C+ R ++ H + H ++P+ C C + +++ +H+ +H +P
Sbjct: 441 GKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRP 500
Query: 534 FRCQ 523
+ C+
Sbjct: 501 YVCE 504
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 49.2 bits (112), Expect = 6e-07
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = -3
Query: 450 FACSYCAYRTVQKPNLVKHMYLHTNQKPFSCDQCNYRCVQKTNLTKHKLRHLNEKS---- 283
F C CA R + NL +H H+ +P C C +C +K L +H R N+KS
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKSVIEE 90
Query: 282 GEKLDVRNVKPYRPRQK 232
G K DV +VK +Q+
Sbjct: 91 GSK-DVLDVKAAASQQE 106
Score = 39.9 bits (89), Expect = 4e-04
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = -3
Query: 582 KNNVAKHILVHMKEKPFRCQYCNYRCAQKNNLVVHERTHTGFKPFACSYCAYRTVQKPNL 403
K + + L+ K + F C C R + NL H+ H+ +P C YC + +K L
Sbjct: 16 KRKLTEPSLIDSK-RVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLL 74
Query: 402 VKHMYLHTNQK 370
+H+ N K
Sbjct: 75 KRHIQRFHNDK 85
Score = 39.9 bits (89), Expect = 4e-04
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 627 EKPFSCTFCDYKSGQKNNVAKHILVHMKEKPFRCQYCNYRCAQKNNLVVH-ERTH 466
++ F C C + + N+ +H H K +P C YC +C +K+ L H +R H
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
Score = 37.9 bits (84), Expect = 0.001
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -3
Query: 702 FGCTQCSYRCQSPAILKIHERVHSGEKPFSCTFCDYKSGQKNNVAKHI 559
F C QC+ R L H+ HS +P C +C+ K +K+ + +HI
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHI 78
Score = 36.3 bits (80), Expect = 0.005
Identities = 22/88 (25%), Positives = 38/88 (43%)
Frame = -3
Query: 378 NQKPFSCDQCNYRCVQKTNLTKHKLRHLNEKSGEKLDVRNVKPYRPRQKSVKCHMCAYRC 199
+++ F CDQC R + NLT+HK H + + + C C +C
Sbjct: 27 SKRVFPCDQCAKRFTRHENLTRHKACH------------------SKAEPIPCPYCEIKC 68
Query: 198 VQKSSMEKHMKFEHGASFEQEGGSNDAI 115
+K +++H++ H E GS D +
Sbjct: 69 KRKDLLKRHIQRFHNDKSVIEEGSKDVL 96
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 46.8 bits (106), Expect = 3e-06
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -3
Query: 630 GEKPFSCTFCDYKSGQKNNVAKHI-LVHMKEKPFRCQYCNYRCAQKNNLVVHERTHTGFK 454
G K F C C K + ++ +HI +H EKPF C C R ++++NL HER H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNAS 477
Query: 453 P-FACSY 436
P AC +
Sbjct: 478 PRLACFF 484
Score = 42.7 bits (96), Expect = 5e-05
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 462 GFKPFACSYCAYRTVQKPNLVKHMY-LHTNQKPFSCDQCNYRCVQKTNLTKHKLRHLN 292
G K F C C+ + + +L +H+ LHT++KPF C C R ++ NL +H+ H+N
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVN 475
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 46.4 bits (105), Expect = 4e-06
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -3
Query: 624 KPFSCTFCDYKSGQKNNVAKHILVHMKEKPFRCQY--CNYRCAQKNNLVVHERTH 466
K + C FC ++ + +HI H EKPF C Y C R +++ L+ H RTH
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 46.4 bits (105), Expect = 4e-06
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -3
Query: 540 KPFRCQYCNYRCAQKNNLVVHERTHTGFKPFACSY--CAYRTVQKPNLVKHMYLH 382
K + C +C ++ + V H R+HTG KPF CSY C R ++ L++H+ H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 39.5 bits (88), Expect = 5e-04
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 456 KPFACSYCAYRTVQKPNLVKHMYLHTNQKPFSCD--QCNYRCVQKTNLTKHKLRHLNE 289
K + C +C ++ + V+H+ HT +KPF C C R ++ L +H HL +
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRK 59
Score = 35.5 bits (78), Expect = 0.008
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = -3
Query: 648 HERVHSGEKPFSCTF--CDYKSGQKNNVAKHILVHMKE 541
H R H+GEKPF C++ C + +++ + +H+ H+++
Sbjct: 22 HIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRK 59
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 46.0 bits (104), Expect = 6e-06
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 540 KPFRCQYCNYRCAQKNNLVVHERTHTGFKPFACSY--CAYRTVQKPNLVKHMYLHTN 376
+P++C C + + H RTHTG KP C++ CA R + L +H +HTN
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = -3
Query: 624 KPFSCTFCDYKSGQKNNVAKHILVHMKEKPFRCQY--CNYRCAQKNNLVVHERTHT 463
+P+ C C + + +HI H EKP C + C R ++ + L H R HT
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 35.5 bits (78), Expect = 0.008
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -3
Query: 456 KPFACSYCAYRTVQKPNLVKHMYLHTNQKPFSC--DQCNYRCVQKTNLTKHKLRHLNEKS 283
+P+ C C + + +H+ HT +KP C C R + LT+H H N S
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANS 83
Score = 35.5 bits (78), Expect = 0.008
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 696 CTQCSYRCQSPAILKIHERVHSGEKPFSCTF--CDYKSGQKNNVAKHILVH 550
CT+ YR + H R H+GEKP CTF C + + + + +H +H
Sbjct: 31 CTKAFYRLEHQTR---HIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = -3
Query: 705 KFGCTQCSYRCQSPAILKIHERVHSGEKPFSCTF--CDYKSGQKNNVAKHILVH 550
++ CT+C P+ LKIH H+GE+PF C + C ++N+ +H +H
Sbjct: 467 RYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 38.7 bits (86), Expect = 8e-04
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 534 FRCQYCNYRCAQKNNLVVHERTHTGFKPFACSY--CAYRTVQKPNLVKHMYLH 382
+RC C ++ ++L +H +HTG +PF C Y C + N+ +H +H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 33.9 bits (74), Expect = 0.024
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -3
Query: 450 FACSYCAYRTVQKPNLVKHMYLHTNQKPFSCDQ--CNYRCVQKTNLTKHKLRH 298
+ C+ C + +L H Y HT ++PF CD C ++N+ +H+ H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 31.5 bits (68), Expect = 0.13
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 618 FSCTFCDYKSGQKNNVAKHILVHMKEKPFRCQY--CNYRCAQKNNLVVHERTH 466
+ CT C + +++ H H E+PF C Y C ++N+ H+R H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -3
Query: 534 FRCQY--CNYRCAQKNNLVVHERTHTGFKPFACSYCAYRTVQKPNLVKHM-YLHTNQKPF 364
F C Y C +K +L HERTH K F+CS+C + L +H+ +H ++
Sbjct: 26 FYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQNL 85
Query: 363 S 361
S
Sbjct: 86 S 86
Score = 35.5 bits (78), Expect = 0.008
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -3
Query: 657 LKIHERVHS-GEKPFSCTF--CDYKSGQKNNVAKHILVHMKEKPFRCQYCNYRCAQKNNL 487
LK R H G+ F CT+ C +K ++ +H H K F C +CN A+ + L
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 486 VVH 478
H
Sbjct: 72 NRH 74
Score = 35.5 bits (78), Expect = 0.008
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -3
Query: 474 RTHT-GFKPFACSY--CAYRTVQKPNLVKHMYLHTNQKPFSCDQCNYRCVQKTNLTKH-K 307
R H G F C+Y C +K +L +H H N K FSC CN + L +H +
Sbjct: 17 RAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
Query: 306 LRHLNEKS 283
HL +++
Sbjct: 77 QMHLQKQN 84
Score = 34.7 bits (76), Expect = 0.014
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = -3
Query: 705 KFGCT--QCSYRCQSPAILKIHERVHSGEKPFSCTFCDYKSGQKNNVAKHI-LVHMKEK 538
+F CT C L+ HER H K FSC+FC+ + + + +H+ +H++++
Sbjct: 25 RFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQ 83
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 35.5 bits (78), Expect = 0.008
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Frame = -3
Query: 546 KEKPFRCQYCNYRCAQKNNLVVHERTHTGFKPFACSY-------CAYRTVQKPNLVKHMY 388
K K + C+ C A+ +L H R+HT KPF CS C + ++ L++H
Sbjct: 66 KVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQ 125
Query: 387 -LHTNQKP 367
+H N +P
Sbjct: 126 KIHRNPQP 133
Score = 35.1 bits (77), Expect = 0.010
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 456 KPFACSYCAYRTVQKPNLVKHMYLHTNQKPFSCDQ 352
K + C C + +L +H+ HTN+KPF+C +
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSE 102
Score = 29.5 bits (63), Expect = 0.52
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 705 KFGCTQCSYRCQSPAILKIHERVHSGEKPFSCTFCD 598
++ C C+ LK H R H+ EKPF+C+ D
Sbjct: 69 QYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEID 104
Score = 29.1 bits (62), Expect = 0.69
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 624 KPFSCTFCDYKSGQKNNVAKHILVHMKEKPFRC 526
K + C C + ++ +HI H EKPF C
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 33.5 bits (73), Expect = 0.032
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -3
Query: 489 LVVHERTHTGFKPFACSY--CAYRTVQKPNLVKHM 391
LV H R+HTG KPF CS C + L KHM
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHM 127
Score = 31.9 bits (69), Expect = 0.098
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -3
Query: 657 LKIHERVHSGEKPFSCTF--CDYKSGQKNNVAKHI 559
L H R H+GEKPF C+ CD + + +AKH+
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHM 127
Score = 29.5 bits (63), Expect = 0.52
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -3
Query: 405 LVKHMYLHTNQKPFSCD--QCNYRCVQKTNLTKHKLRHLNE 289
LV H+ HT +KPF C +C+ + L KH +R ++E
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKH-MRTVHE 132
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 31.5 bits (68), Expect = 0.13
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -3
Query: 543 EKPFRCQYCNYRCAQKN-NLVVHERTHTGFKPFACSYCAYRTVQKPNLVKHMYLHTNQKP 367
+KP++C N A KN N + + + H +C+ T P + H KP
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYHKLH--------GHCSPITTPTPAPIPHQGFVVENKP 398
Query: 366 FSCDQCNYRCVQKTNLTKHK 307
+ C+ C+ R L H+
Sbjct: 399 YRCEVCSKRYKNLNGLKYHR 418
Score = 29.5 bits (63), Expect = 0.52
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 549 MKEKPFRCQYCNYRCAQKNNLVVHERTHT 463
++ KP+RC+ C+ R N L H RTH+
Sbjct: 394 VENKPYRCEVCSKRYKNLNGLKYH-RTHS 421
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 30.3 bits (65), Expect = 0.30
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -3
Query: 450 FACSY--CAYRTVQKPNLVKHMYLHTNQKPFSCDQCNYRCVQKTNLTKHKLRHLNEKSGE 277
+ C + C +K + +H HTN K F C C+ + L RH+N+K +
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLN----RHVNQKHVK 72
Query: 276 KLD 268
+ D
Sbjct: 73 QND 75
Score = 29.5 bits (63), Expect = 0.52
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 534 FRCQY--CNYRCAQKNNLVVHERTHTGFKPFACSYCAYRTVQKPNLVKHM 391
++C + C +K + H R+HT K F C +C+ + L +H+
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 26.2 bits (55), Expect = 4.8
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = -3
Query: 630 GEKPFSCTF--CDYKSGQKNNVAKHILVHMKEKPFRCQYCN 514
G+ + C F C +K + +H H K F C +C+
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCS 53
>SPAC5D6.05 |sep11|pmc6, med18|mediator complex subunit Pmc6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 207
Score = 29.1 bits (62), Expect = 0.69
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 393 MYLHTNQKPFSCDQCNYRCVQKTNLTKHKLRHLNEKSG 280
MYL N +P D+C R V + LT + EK G
Sbjct: 80 MYLEGNSEPKREDKCGIRPVNRAKLTNGSVTEFVEKMG 117
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -3
Query: 231 SVKCHMCAYRCVQKSSMEKHMKFEHGASFEQEGGSNDAIQNLSVKKDDYYADKS 70
++K H R + S +K+ K F G N + + +++KKD+ DKS
Sbjct: 640 TLKKHRLLARLKSRIS-KKNSKVNENLRFSLNDGENYSNETITLKKDEIVLDKS 692
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/51 (23%), Positives = 21/51 (41%)
Frame = -3
Query: 519 CNYRCAQKNNLVVHERTHTGFKPFACSYCAYRTVQKPNLVKHMYLHTNQKP 367
CN C + ++ + F PF S ++ NL +++ H N P
Sbjct: 3 CNRTCPSSDCGILCNHSVPSFPPFHSSVANIHFTKENNLKSNIFEHNNNSP 53
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 26.6 bits (56), Expect = 3.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 366 FSCDQCNYRCVQKTNLTKHK 307
F CD+C+ V+++ LT HK
Sbjct: 139 FRCDKCDMMFVKQSGLTNHK 158
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.2 bits (55), Expect = 4.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 599 SQNVHENGFSPEWTRSWIF 655
S+ VHENGF P W + ++
Sbjct: 812 SKVVHENGFRPFWGETMVY 830
>SPBC1703.07 |||ATP citrate synthase subunit 1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 615
Score = 25.4 bits (53), Expect = 8.5
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = -3
Query: 270 DVRNVKPYRP----RQKSVKCHMCAYRCVQKSSMEK-HMKFEHGASFEQEGGSNDAIQNL 106
+V V+ YR + ++K + A+ SSM K ++F H SF +N
Sbjct: 238 EVGGVEEYRVIEAVKNGTIKKPIVAWAIGTCSSMFKTEVQFGHAGSFANSELETAVAKNQ 297
Query: 105 SVKKDDYYADKSMEALPA 52
++++ Y ++ E LPA
Sbjct: 298 AMREAGIYVPETFEKLPA 315
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,378,621
Number of Sequences: 5004
Number of extensions: 46650
Number of successful extensions: 203
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 347244562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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