Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18d09
(674 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M13934-2|AAB59505.1| 151|Homo sapiens ribosomal protein S14 pro... 198 2e-50
BC091474-1|AAH91474.1| 151|Homo sapiens ribosomal protein S14 p... 198 2e-50
BC020515-1|AAH20515.1| 151|Homo sapiens ribosomal protein S14 p... 198 2e-50
BC006784-1|AAH06784.1| 151|Homo sapiens ribosomal protein S14 p... 198 2e-50
BC003401-1|AAH03401.1| 151|Homo sapiens ribosomal protein S14 p... 198 2e-50
BC001126-1|AAH01126.1| 151|Homo sapiens ribosomal protein S14 p... 198 2e-50
BC072682-1|AAH72682.1| 170|Homo sapiens similar to ribosomal pr... 186 6e-47
U64791-1|AAB06460.1| 1179|Homo sapiens Golgi membrane sialoglyco... 32 2.1
U28811-1|AAB02178.1| 1177|Homo sapiens cysteine-rich fibroblast ... 32 2.1
BC060822-1|AAH60822.1| 1203|Homo sapiens golgi apparatus protein... 32 2.1
>M13934-2|AAB59505.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 198 bits (482), Expect = 2e-50
Identities = 100/140 (71%), Positives = 107/140 (76%)
Frame = -3
Query: 462 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 283
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 282 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXX 103
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA GAQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 102 XXSMKIGRIEDVTPVPSDST 43
MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140
>BC091474-1|AAH91474.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 198 bits (482), Expect = 2e-50
Identities = 100/140 (71%), Positives = 107/140 (76%)
Frame = -3
Query: 462 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 283
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 282 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXX 103
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA GAQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 102 XXSMKIGRIEDVTPVPSDST 43
MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140
>BC020515-1|AAH20515.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 198 bits (482), Expect = 2e-50
Identities = 100/140 (71%), Positives = 107/140 (76%)
Frame = -3
Query: 462 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 283
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 282 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXX 103
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA GAQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 102 XXSMKIGRIEDVTPVPSDST 43
MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140
>BC006784-1|AAH06784.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 198 bits (482), Expect = 2e-50
Identities = 100/140 (71%), Positives = 107/140 (76%)
Frame = -3
Query: 462 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 283
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 282 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXX 103
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA GAQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 102 XXSMKIGRIEDVTPVPSDST 43
MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140
>BC003401-1|AAH03401.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 198 bits (482), Expect = 2e-50
Identities = 100/140 (71%), Positives = 107/140 (76%)
Frame = -3
Query: 462 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 283
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 282 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXX 103
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA GAQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 102 XXSMKIGRIEDVTPVPSDST 43
MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140
>BC001126-1|AAH01126.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 198 bits (482), Expect = 2e-50
Identities = 100/140 (71%), Positives = 107/140 (76%)
Frame = -3
Query: 462 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 283
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 282 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXX 103
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA GAQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 102 XXSMKIGRIEDVTPVPSDST 43
MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140
>BC072682-1|AAH72682.1| 170|Homo sapiens similar to ribosomal
protein S14 protein.
Length = 170
Score = 186 bits (453), Expect = 6e-47
Identities = 94/140 (67%), Positives = 102/140 (72%)
Frame = -3
Query: 462 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 283
MAP K K KEE + LGPQ GE VFGV HIFASFNDTFVHVTDLSG++TI RVTGGM
Sbjct: 1 MAPGKGKEKKEEQVINLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKQTICRVTGGM 60
Query: 282 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXX 103
KVKADRDE+SPYAAML QDVA++CK LGI ALHI+LRA GAQ
Sbjct: 61 KVKADRDESSPYAAMLTTQDVAQRCKELGIIALHIQLRATGGNRTKTLGPGAQSALRALA 120
Query: 102 XXSMKIGRIEDVTPVPSDST 43
MKIGRIEDVTP+PSDST
Sbjct: 121 CSGMKIGRIEDVTPIPSDST 140
>U64791-1|AAB06460.1| 1179|Homo sapiens Golgi membrane
sialoglycoprotein MG160 protein.
Length = 1179
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 410 PRVTWTSSLATLFFLGAMAQPENNIFNTCN 499
P+ TW+++LA L L + +PEN I + CN
Sbjct: 127 PKHTWSNNLAVLECLQDVREPENEISSDCN 156
>U28811-1|AAB02178.1| 1177|Homo sapiens cysteine-rich fibroblast
growth factor receptor protein.
Length = 1177
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 410 PRVTWTSSLATLFFLGAMAQPENNIFNTCN 499
P+ TW+++LA L L + +PEN I + CN
Sbjct: 126 PKHTWSNNLAVLECLQDVREPENEISSDCN 155
>BC060822-1|AAH60822.1| 1203|Homo sapiens golgi apparatus protein 1
protein.
Length = 1203
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 410 PRVTWTSSLATLFFLGAMAQPENNIFNTCN 499
P+ TW+++LA L L + +PEN I + CN
Sbjct: 127 PKHTWSNNLAVLECLQDVREPENEISSDCN 156
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,536,257
Number of Sequences: 237096
Number of extensions: 2173136
Number of successful extensions: 4787
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4781
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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