Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc18c14
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione S-tran...    28   0.24 
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     25   2.2  
AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    24   5.2  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   5.2  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   5.2  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    23   9.0  
DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.        23   9.0  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    23   9.0  

>AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione
           S-transferase D6 protein.
          Length = 222

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = +2

Query: 392 RDQVLRVGSFQLSGRWTAIDHFTRV-HKQREFVKQLRGHLDLPFQFTDRQHYVLEDLLRE 568
           +D V  + SF  + RWTA DH T         V  L G L+  F      H   E   RE
Sbjct: 137 QDAVGVLDSFLSASRWTAGDHITVADFAIAVTVAALDGLLNFDFSVYPNVHRWYEQCKRE 196

Query: 569 CVG 577
            VG
Sbjct: 197 LVG 199


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -2

Query: 395 PGNKLCDVQ*FGSLRRPGEGQREEAIQPGDGYE-KDGRVHERSGWFFI 255
           PG+K  D + F +    GEG++++ I+P    + K  R ++ S + F+
Sbjct: 82  PGHKKRDCKEFLNRESSGEGEKKKKIKPNKEQQVKTVRENDTSSFTFM 129


>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = -1

Query: 678 CSHSETTPCSDTCSVGCC 625
           C    T PC D    GCC
Sbjct: 23  CESRCTCPCKDGAKEGCC 40


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 195  RDKSNMASNSSRVMNISA*RNEKPPTSLVNSSIFLIA 305
            R + + ASNS  V N  + R   P TSL++    L+A
Sbjct: 1382 RGRHSWASNSVEVPNTCSDRLGTPKTSLMDFKKLLLA 1418


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 102 PIAKTSISGLTLTYKCGKAP 161
           PI +  I  L    KCGKAP
Sbjct: 453 PITRQEIINLANRLKCGKAP 472


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
 Frame = +2

Query: 272 FSRELFHLSH----SRHRAVWLLLFDLPRDAVNSQIIVHRIVC 388
           F R L H+      S +R++WL L  L RD   S       +C
Sbjct: 194 FQRALRHVGPAAKVSEYRSLWLRLSKLARDTGFSTCYTFTFIC 236


>DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.
          Length = 482

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 313 PVTAMRKMEEFTREVGGFSFL 251
           P    R ++EFTR++GG   L
Sbjct: 122 PKNYARLLKEFTRDIGGKGIL 142


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 387 VPGTKYLEWGRFSCPDD 437
           VPG +Y E+   S PDD
Sbjct: 54  VPGYRYAEYAANSFPDD 70


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,940
Number of Sequences: 2352
Number of extensions: 16789
Number of successful extensions: 49
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)