Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18c10
(203 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-806|AAX52648.1| 820|Drosophila melanogaster CG15624-PB... 27 2.7
BT029586-1|ABL75645.1| 415|Drosophila melanogaster IP16932p pro... 27 3.6
BT003533-1|AAO39537.1| 704|Drosophila melanogaster RE09535p pro... 27 3.6
BT001800-1|AAN71555.1| 738|Drosophila melanogaster RH29074p pro... 27 3.6
AE014134-1555|AAF52703.1| 666|Drosophila melanogaster CG9310-PC... 27 3.6
AE014134-1554|AAN10680.1| 732|Drosophila melanogaster CG9310-PB... 27 3.6
AE014134-1553|AAF52702.2| 704|Drosophila melanogaster CG9310-PA... 27 3.6
DQ191320-1|ABB80265.1| 123|Drosophila melanogaster truncated p5... 26 6.3
DQ191319-1|ABB80264.1| 495|Drosophila melanogaster p53 protein ... 26 6.3
DQ191318-1|ABB80263.1| 495|Drosophila melanogaster p53 protein ... 26 6.3
BT001357-1|AAN71112.1| 519|Drosophila melanogaster AT28346p pro... 26 6.3
AE014298-397|AAN09076.1| 202|Drosophila melanogaster CG32797-PA... 26 6.3
AE014297-3259|AAN13925.2| 495|Drosophila melanogaster CG33336-P... 26 6.3
>AE014134-806|AAX52648.1| 820|Drosophila melanogaster CG15624-PB,
isoform B protein.
Length = 820
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 100 WRWSSLPIRTAITMAIWN*PPPPKSC 23
WRW SL I A A W P P++C
Sbjct: 32 WRWFSLSILKAAPAAEWK--PKPRNC 55
>BT029586-1|ABL75645.1| 415|Drosophila melanogaster IP16932p
protein.
Length = 415
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 152 AQSTSNTHNFMYSPDNNL 99
A S SN +N M+SP+NNL
Sbjct: 103 ASSGSNNNNSMFSPNNNL 120
>BT003533-1|AAO39537.1| 704|Drosophila melanogaster RE09535p
protein.
Length = 704
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 152 AQSTSNTHNFMYSPDNNL 99
A S SN +N M+SP+NNL
Sbjct: 99 ASSGSNNNNSMFSPNNNL 116
>BT001800-1|AAN71555.1| 738|Drosophila melanogaster RH29074p
protein.
Length = 738
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 152 AQSTSNTHNFMYSPDNNL 99
A S SN +N M+SP+NNL
Sbjct: 133 ASSGSNNNNSMFSPNNNL 150
>AE014134-1555|AAF52703.1| 666|Drosophila melanogaster CG9310-PC,
isoform C protein.
Length = 666
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 152 AQSTSNTHNFMYSPDNNL 99
A S SN +N M+SP+NNL
Sbjct: 61 ASSGSNNNNSMFSPNNNL 78
>AE014134-1554|AAN10680.1| 732|Drosophila melanogaster CG9310-PB,
isoform B protein.
Length = 732
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 152 AQSTSNTHNFMYSPDNNL 99
A S SN +N M+SP+NNL
Sbjct: 127 ASSGSNNNNSMFSPNNNL 144
>AE014134-1553|AAF52702.2| 704|Drosophila melanogaster CG9310-PA,
isoform A protein.
Length = 704
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 152 AQSTSNTHNFMYSPDNNL 99
A S SN +N M+SP+NNL
Sbjct: 99 ASSGSNNNNSMFSPNNNL 116
>DQ191320-1|ABB80265.1| 123|Drosophila melanogaster truncated p53
splice variant isoformprotein.
Length = 123
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 152 AQSTSNTHNFMYSPDNNLEVVIITNSDGDH 63
A +NT+N M NNLE++ NSDG++
Sbjct: 82 AYGGNNTNNMMQFT-NNLEILANNNSDGNN 110
>DQ191319-1|ABB80264.1| 495|Drosophila melanogaster p53 protein
long form variant 2 protein.
Length = 495
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 152 AQSTSNTHNFMYSPDNNLEVVIITNSDGDH 63
A +NT+N M NNLE++ NSDG++
Sbjct: 82 AYGGNNTNNMMQFT-NNLEILANNNSDGNN 110
>DQ191318-1|ABB80263.1| 495|Drosophila melanogaster p53 protein
long form variant 1 protein.
Length = 495
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 152 AQSTSNTHNFMYSPDNNLEVVIITNSDGDH 63
A +NT+N M NNLE++ NSDG++
Sbjct: 82 AYGGNNTNNMMQFT-NNLEILANNNSDGNN 110
>BT001357-1|AAN71112.1| 519|Drosophila melanogaster AT28346p
protein.
Length = 519
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 152 AQSTSNTHNFMYSPDNNLEVVIITNSDGDH 63
A +NT+N M NNLE++ NSDG++
Sbjct: 106 AYGGNNTNNMMQFT-NNLEILANNNSDGNN 134
>AE014298-397|AAN09076.1| 202|Drosophila melanogaster CG32797-PA
protein.
Length = 202
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 99 GGGHHYQFGRRSRWLFGTNRRRQNHVTFY 13
GGG++ + R RW G + RQ+ VT +
Sbjct: 47 GGGNNKRRNRAGRWHQGARQLRQSPVTIW 75
>AE014297-3259|AAN13925.2| 495|Drosophila melanogaster CG33336-PB,
isoform B protein.
Length = 495
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 152 AQSTSNTHNFMYSPDNNLEVVIITNSDGDH 63
A +NT+N M NNLE++ NSDG++
Sbjct: 82 AYGGNNTNNMMQFT-NNLEILANNNSDGNN 110
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,850,504
Number of Sequences: 53049
Number of extensions: 198424
Number of successful extensions: 765
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 24,988,368
effective HSP length: 47
effective length of database: 22,495,065
effective search space used: 449901300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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