Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc18b10
         (326 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010054-1|AAQ22523.1| 1295|Drosophila melanogaster LD19823p pro...    29   1.8  
AE014134-993|AAF52305.1| 1289|Drosophila melanogaster CG9044-PA ...    29   1.8  
BT016045-1|AAV36930.1|  383|Drosophila melanogaster LP19870p pro...    27   4.2  
AE014297-989|AAF54415.3|  383|Drosophila melanogaster CG8319-PA ...    27   4.2  
BT025010-1|ABE01240.1|  415|Drosophila melanogaster IP02589p pro...    27   5.5  
AY089557-1|AAL90295.1|  869|Drosophila melanogaster LD44376p pro...    27   5.5  
AE014296-905|AAF47943.1|  869|Drosophila melanogaster CG7479-PA ...    27   5.5  

>BT010054-1|AAQ22523.1| 1295|Drosophila melanogaster LD19823p
           protein.
          Length = 1295

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = -3

Query: 156 SKKNPNPAS-FIDTPSKSNVTFKKKMDFIKIFLDNNW-RNCNFKNCINIE 13
           S   PNP S + + P  S++  KKK++ +++   N W ++ N +  + IE
Sbjct: 425 SVSTPNPRSEYEEEPDNSHLETKKKIETLRLTYGNEWLKSGNAELMLGIE 474


>AE014134-993|AAF52305.1| 1289|Drosophila melanogaster CG9044-PA
           protein.
          Length = 1289

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = -3

Query: 156 SKKNPNPAS-FIDTPSKSNVTFKKKMDFIKIFLDNNW-RNCNFKNCINIE 13
           S   PNP S + + P  S++  KKK++ +++   N W ++ N +  + IE
Sbjct: 425 SVSTPNPRSEYEEEPDNSHLETKKKIETLRLTYGNEWLKSGNAELMLGIE 474


>BT016045-1|AAV36930.1|  383|Drosophila melanogaster LP19870p
           protein.
          Length = 383

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 195 FWTILNARVQIDKSKKNPNPASFIDTPSKSNVTFKKKMD 79
           +  ILN   Q+ K + N     FI+ P K N+  KKK++
Sbjct: 80  YLAILNG--QVIKDEPNEEDFLFIENPDKGNLEAKKKLN 116


>AE014297-989|AAF54415.3|  383|Drosophila melanogaster CG8319-PA
           protein.
          Length = 383

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 195 FWTILNARVQIDKSKKNPNPASFIDTPSKSNVTFKKKMD 79
           +  ILN   Q+ K + N     FI+ P K N+  KKK++
Sbjct: 80  YLAILNG--QVIKDEPNEEDFLFIENPDKGNLEAKKKLN 116


>BT025010-1|ABE01240.1|  415|Drosophila melanogaster IP02589p
           protein.
          Length = 415

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = -3

Query: 126 IDTPSKSNVTFKKKMDFIKIFLDNNWRNCNFKNCINI 16
           I   SKS+V  +  M+++++ + NNW+ C F   +++
Sbjct: 4   IHVESKSSVEIEN-MNYLRV-IRNNWKKCTFGAAVSV 38


>AY089557-1|AAL90295.1|  869|Drosophila melanogaster LD44376p
           protein.
          Length = 869

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = -3

Query: 153 KKNPNPASFIDTPSKSNVTFKKKMDFIKIFLDNNWRNCNFKNCINIER 10
           K +P  A   D P       +++ D +  F+D++W    + +  N ER
Sbjct: 436 KDSPKEAFLCDCPKCGEKDARRETDTMDTFVDSSWYYLRYLDAQNSER 483


>AE014296-905|AAF47943.1|  869|Drosophila melanogaster CG7479-PA
           protein.
          Length = 869

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = -3

Query: 153 KKNPNPASFIDTPSKSNVTFKKKMDFIKIFLDNNWRNCNFKNCINIER 10
           K +P  A   D P       +++ D +  F+D++W    + +  N ER
Sbjct: 436 KDSPKEAFLCDCPKCGEKDARRETDTMDTFVDSSWYYLRYLDAQNSER 483


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,833,677
Number of Sequences: 53049
Number of extensions: 173200
Number of successful extensions: 526
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 693319869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)