Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18b01
(602 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 252 5e-66
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 251 1e-65
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 250 1e-65
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 208 8e-53
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 204 1e-51
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 190 3e-47
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 184 1e-45
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 174 1e-42
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 159 5e-38
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 159 6e-38
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 149 7e-35
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 132 8e-30
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 117 2e-25
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 108 9e-23
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 98 2e-19
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 90 3e-17
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 88 1e-16
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 85 1e-15
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 79 6e-14
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa... 74 3e-12
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae... 70 4e-11
UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal ... 67 3e-10
UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15; Archa... 62 7e-09
UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1; Nanoar... 62 1e-08
UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4; Euryar... 59 7e-08
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 54 3e-06
UniRef50_O83265 Cluster: 50S ribosomal protein L11; n=5; Bacteri... 40 0.045
UniRef50_P05969 Cluster: 50S ribosomal protein L11P; n=7; Haloba... 40 0.060
UniRef50_Q7VRP3 Cluster: 50S ribosomal protein L11; n=4; Bacteri... 38 0.14
UniRef50_Q21QS4 Cluster: Major facilitator superfamily MFS_1; n=... 38 0.24
UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3; ... 38 0.24
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.42
UniRef50_Q2J5H8 Cluster: Ribosomal protein L11; n=1; Frankia sp.... 35 1.3
UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4; Sophophora|... 34 3.0
UniRef50_UPI000023D25B Cluster: hypothetical protein FG06262.1; ... 33 3.9
UniRef50_UPI00006615FB Cluster: Homolog of Homo sapiens "Splice ... 33 6.9
UniRef50_A1Z7M5 Cluster: CG13744-PA; n=4; Diptera|Rep: CG13744-P... 33 6.9
UniRef50_UPI00006A17F2 Cluster: Ras and Rab interactor 2 (Ras in... 32 9.1
UniRef50_Q1ZDC0 Cluster: Putative uncharacterized protein; n=1; ... 32 9.1
UniRef50_Q5CXY0 Cluster: Signal peptide-containing protein with ... 32 9.1
UniRef50_Q23KL5 Cluster: Protein kinase domain containing protei... 32 9.1
UniRef50_Q89W61 Cluster: 30S ribosomal protein S20; n=12; Alphap... 32 9.1
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 252 bits (617), Expect = 5e-66
Identities = 117/146 (80%), Positives = 135/146 (92%)
Frame = -1
Query: 482 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 303
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRS 123
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ +++V IA+ MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 122 MARYLSGSVKEILGTAQSVGCXCGGQ 45
+AR LSG++KEILGTAQSVGC G+
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGR 146
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 251 bits (614), Expect = 1e-65
Identities = 117/146 (80%), Positives = 132/146 (90%)
Frame = -1
Query: 482 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 303
MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKITV
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 202
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRS 123
LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI ED++ IA++MR RS
Sbjct: 203 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRS 262
Query: 122 MARYLSGSVKEILGTAQSVGCXCGGQ 45
MAR L G+ KE+LGTAQSVGC G+
Sbjct: 263 MARELKGTCKEVLGTAQSVGCTVDGK 288
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 250 bits (613), Expect = 1e-65
Identities = 116/146 (79%), Positives = 134/146 (91%)
Frame = -1
Query: 482 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 303
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRS 123
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ +++V I + MR+RS
Sbjct: 93 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQMRHRS 152
Query: 122 MARYLSGSVKEILGTAQSVGCXCGGQ 45
+AR LSG++KEILGTAQSVGC G+
Sbjct: 153 LARELSGTIKEILGTAQSVGCNVDGR 178
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 208 bits (508), Expect = 8e-53
Identities = 97/143 (67%), Positives = 123/143 (86%), Gaps = 1/143 (0%)
Frame = -1
Query: 485 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKI 309
KMPPKFDPN + +R GGEVGA SSLAPKIGPLGLSPKKVG+DIAK T+ DWKGL++
Sbjct: 62 KMPPKFDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKETAKDWKGLRV 121
Query: 308 TVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRN 129
TV+LTVQNRQA+++VVP+A+AL+I+ALKEP +DRKK K I H GN SL+D++ +A++MR
Sbjct: 122 TVKLTVQNRQAKVSVVPTASALVIKALKEPFQDRKKVKGITHTGNCSLDDIIEVARVMRP 181
Query: 128 RSMARYLSGSVKEILGTAQSVGC 60
+S A+ L+G+VKEILGTA+SVGC
Sbjct: 182 KSCAKNLAGTVKEILGTAKSVGC 204
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 204 bits (498), Expect = 1e-51
Identities = 101/171 (59%), Positives = 130/171 (76%), Gaps = 24/171 (14%)
Frame = -1
Query: 482 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW------- 324
MPPKFDPNE+K+++LR GGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DW
Sbjct: 1 MPPKFDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWVSTQYGC 60
Query: 323 -----------------KGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQK 195
KGL++TV+LT+QNRQA ++VVPSA++L+I+ALKEPPRDRKK+K
Sbjct: 61 CDARKEQWLTWTVSAVQKGLRVTVKLTIQNRQAAVSVVPSASSLVIKALKEPPRDRKKEK 120
Query: 194 NIKHNGNISLEDVVGIAKIMRNRSMARYLSGSVKEILGTAQSVGCXCGGQA 42
NIKHN +I L+D++ IA+ MR+RS+A+ L G+V EILGTA SVGC G++
Sbjct: 121 NIKHNKSIPLDDIIEIARTMRSRSLAKELKGTVLEILGTAFSVGCQVDGRS 171
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 190 bits (462), Expect = 3e-47
Identities = 89/147 (60%), Positives = 111/147 (75%)
Frame = -1
Query: 485 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKIT 306
KMPPKFDPN+ V +R VGGEV AT+SLAPK+GPLGL+ KK+G+DIAK+T DWKGLK+T
Sbjct: 55 KMPPKFDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVT 114
Query: 305 VQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNR 126
QL V+NR A + V PS A+ +IRALKEPPRDRKK KNIKH+GNI+ +++ IAK
Sbjct: 115 CQLRVKNRVATVIVTPSVASRLIRALKEPPRDRKKVKNIKHDGNIAFSEILKIAKESAPN 174
Query: 125 SMARYLSGSVKEILGTAQSVGCXCGGQ 45
SM + V E+LGTA S+GC G+
Sbjct: 175 SMGASMKSVVMEVLGTAVSIGCTIDGE 201
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 184 bits (449), Expect = 1e-45
Identities = 84/137 (61%), Positives = 108/137 (78%)
Frame = -1
Query: 446 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 267
V +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT+QNRQA+I
Sbjct: 25 VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIE 84
Query: 266 VVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRSMARYLSGSVKEI 87
VVP++A+++++ L E PRDRKK KNIKHNGN+ +E V IA+ M+ +S A+ G+VKEI
Sbjct: 85 VVPTSASMVLKELNEAPRDRKKVKNIKHNGNLKIEQVYSIARAMKEKSRAKEFRGTVKEI 144
Query: 86 LGTAQSVGCXCGGQAAT 36
LGT S+GC G+ T
Sbjct: 145 LGTCNSIGCTVDGKKPT 161
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 174 bits (424), Expect = 1e-42
Identities = 73/146 (50%), Positives = 110/146 (75%)
Frame = -1
Query: 482 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 303
MPPK DPNE++++N++ GGE G S+LAPK+GPLGL+PK+VGD I + WKG+++ V
Sbjct: 1 MPPKVDPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKWKGIRVMV 60
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRS 123
L QNR A + V+P+++AL+I+ + RDRKK KN+KHNGN++LE V+ +A+ + +S
Sbjct: 61 NLRCQNRNADVTVIPTSSALLIKEIGGYERDRKKTKNVKHNGNLTLEQVIKVARAVEEKS 120
Query: 122 MARYLSGSVKEILGTAQSVGCXCGGQ 45
+A+ +G+VK++LGTAQS+G GQ
Sbjct: 121 LAKTFTGTVKQVLGTAQSLGATVDGQ 146
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 159 bits (386), Expect = 5e-38
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = -1
Query: 446 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 267
V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+QNRQAQI
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 165
Query: 266 VVPSAAALIIRALKEPPRDRKKQKN 192
VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 166 VVPSASALIIKALKEPPRDRKKQKN 190
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 159 bits (385), Expect = 6e-38
Identities = 81/143 (56%), Positives = 110/143 (76%), Gaps = 2/143 (1%)
Frame = -1
Query: 467 DPNEIKIVNLRCVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 291
DP + K + L+ VGGEV GAT LA ++GPLGLS K VG+DI KAT+D+K LK+ VQL +
Sbjct: 8 DP-DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLAI 64
Query: 290 QNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMR-NRSMAR 114
++R+A + V PS A LII++LKEPPRDRKK+KNI HNG++ + +VV IA+I R +RS +
Sbjct: 65 KDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARIARSSRSYSN 124
Query: 113 YLSGSVKEILGTAQSVGCXCGGQ 45
LSG+VKE+LGT +S+GC G+
Sbjct: 125 SLSGTVKEVLGTCKSIGCKVDGK 147
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 149 bits (360), Expect = 7e-35
Identities = 83/144 (57%), Positives = 100/144 (69%)
Frame = -1
Query: 476 PKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQL 297
PKF P EIK+ LRC G EV A S+LAPKI PLGLSPK KG
Sbjct: 131 PKFGPKEIKVAYLRCTGDEVSAMSALAPKISPLGLSPK-------------KG------- 170
Query: 296 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRSMA 117
QAQI VVPSA+ALII+ALKEP RDRKKQKNIKH+GNI+ +++V IA+ MR+RS+
Sbjct: 171 -----QAQIEVVPSASALIIKALKEPARDRKKQKNIKHSGNITSDEIVNIARQMRHRSLD 225
Query: 116 RYLSGSVKEILGTAQSVGCXCGGQ 45
R LSG++KE+LGTAQS+GC G+
Sbjct: 226 RELSGTIKELLGTAQSLGCNVDGR 249
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 132 bits (318), Expect = 8e-30
Identities = 62/141 (43%), Positives = 96/141 (68%)
Frame = -1
Query: 482 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 303
MPP+ DPN ++ LR GG + A ++L PKIGP GL PK VG+ I +AT +KG+++ V
Sbjct: 1 MPPRADPNAEIVLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQGYKGIRVKV 60
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRS 123
++ +NRQ ++VVP+A++L+++AL E PR K + + H G + + V+ IAK +R S
Sbjct: 61 RIVSKNRQPTVSVVPTASSLLVKALGEGPRTIPKGQPLLHTGTVKFDTVLDIAKELRANS 120
Query: 122 MARYLSGSVKEILGTAQSVGC 60
A +G+V E+LG+A+SVGC
Sbjct: 121 FALKYAGTVLEVLGSARSVGC 141
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 117 bits (281), Expect = 2e-25
Identities = 59/99 (59%), Positives = 67/99 (67%)
Frame = +1
Query: 172 MLPLCLIFFCFLRSRGGSLRALMIRAAAEGTTAIWACLF*TVSCTVILRPFQSLVALAMS 351
MLPLCL F F S GGS +A+M + A+GTT ACLF + TV L P SLVALA+S
Sbjct: 1 MLPLCLTFLSFFLSLGGSFKAVMTKEEADGTTEAAACLFWIFNWTVTLIPLNSLVALAIS 60
Query: 352 SPTFLGDRPRGPILGAKDDVAPTSPPTHRKFTILISFGS 468
SPTF GD+P GPI GAK APTSPPT K+ L SFGS
Sbjct: 61 SPTFFGDKPNGPIFGAKAAEAPTSPPTALKYKYLTSFGS 99
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 108 bits (260), Expect = 9e-23
Identities = 59/133 (44%), Positives = 81/133 (60%)
Frame = +3
Query: 84 KNLFY*ARKVPGH*SVSHDLRNADYIFKGDVAVVFDIFLLFTVTGRLLKGSDDKGCCRGN 263
++LF +R+ G V H N D + KGDV+ V +FLL +V+ L+G DD+G R
Sbjct: 17 QDLFNGSREFSGQRLVLHLSSNVDNLIKGDVSTVLYVFLLLSVSWWFLEGFDDQGRGRRY 76
Query: 264 NSYLGLSVLNCQLHSDLETLPVTCGLGNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQI 443
+ L LSVL+ Q HSD +TLP+T LG+VI HLF RQT+ + GQ GTD P Q+
Sbjct: 77 HLNLSLSVLDRQFHSDPQTLPITSCLGDVIAHLFWRQTQGANLGGQGRRGTDVPTGAPQV 136
Query: 444 HDFNFIWVKLRGH 482
HDF+ + V+L H
Sbjct: 137 HDFDLVGVELGWH 149
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 97.9 bits (233), Expect = 2e-19
Identities = 44/63 (69%), Positives = 55/63 (87%)
Frame = -1
Query: 233 ALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRSMARYLSGSVKEILGTAQSVGCXC 54
A KEPPRDRKKQKNIKH+GNI+ +++V IA+ MR+RS+AR LSG++KEILGTAQSVGC
Sbjct: 174 AKKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNV 233
Query: 53 GGQ 45
G+
Sbjct: 234 DGR 236
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 90.2 bits (214), Expect = 3e-17
Identities = 48/119 (40%), Positives = 72/119 (60%)
Frame = +3
Query: 132 SHDLRNADYIFKGDVAVVFDIFLLFTVTGRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSD 311
SH L N D +F+ V VFD+ +L +V+ L+ D++ NN LSVL+ QL+S+
Sbjct: 64 SHLLSNFDDVFQLQVTTVFDVLVLLSVSWWFLQSGDNQRGSGWNNRSSSLSVLDLQLNSN 123
Query: 312 LETLPVTCGLGNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQIHDFNFIWVKLRGHFV 488
L+TL + GLG++ T+L QT+ T+ Q T+F D+SQ+ +FIW+KL HFV
Sbjct: 124 LDTLEILGGLGDIFTNLLWGQTQWTNLWSQSSGSTNFTTDSSQVQVLDFIWIKLWRHFV 182
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 88.2 bits (209), Expect = 1e-16
Identities = 46/131 (35%), Positives = 81/131 (61%), Gaps = 1/131 (0%)
Frame = -1
Query: 452 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKITVQLTVQNRQA 276
K+V ++ GG+V + S LA KIGP GLSPKK+G+D AK T +W G+ +T++LT+ + A
Sbjct: 7 KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTKKNWDGIIVTIKLTIIKKNA 66
Query: 275 QIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRSMARYLSGSV 96
+ +VPS ++L+ R ++ + ++ + ++ I+K ++ +S ++ G V
Sbjct: 67 YLKIVPSVSSLLKREMQLYGKPSV----------LTFKQLIKISKKVQTKSYSKAFKGVV 116
Query: 95 KEILGTAQSVG 63
KE+LGT S+G
Sbjct: 117 KEVLGTCCSMG 127
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 85.0 bits (201), Expect = 1e-15
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = -1
Query: 449 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLT 294
IV +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT
Sbjct: 33 IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLT 84
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 79.4 bits (187), Expect = 6e-14
Identities = 35/51 (68%), Positives = 43/51 (84%)
Frame = -1
Query: 194 NIKHNGNISLEDVVGIAKIMRNRSMARYLSGSVKEILGTAQSVGCXCGGQA 42
++KHNGNI+L+DV +AK+MR RSMAR+LSG+VKEILGT QSVGC G A
Sbjct: 67 SVKHNGNITLDDVTNVAKVMRPRSMARHLSGTVKEILGTCQSVGCTVDGMA 117
Score = 66.9 bits (156), Expect = 3e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = -1
Query: 482 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 372
MPPKF+ NEI+ V LRC GGEVGAT+SLAPKIGPLGL
Sbjct: 1 MPPKFELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37
>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
jannaschii
Length = 161
Score = 73.7 bits (173), Expect = 3e-12
Identities = 44/139 (31%), Positives = 79/139 (56%), Gaps = 3/139 (2%)
Frame = -1
Query: 452 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQ 279
++V + GG A L P IGPLG++ +V +I + T D++G+++ V++ V + R+
Sbjct: 4 EVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRK 63
Query: 278 AQIAV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRSMARYLSG 102
+I V +P ALI + L + + + GN++LE V+ IAK+ ++ ++ L
Sbjct: 64 FEIEVGIPPTTALIKKELGIETAAHEPRHEVV--GNLTLEQVIKIAKMKKDAMLSYTLKN 121
Query: 101 SVKEILGTAQSVGCXCGGQ 45
+VKE+LGT S+G G+
Sbjct: 122 AVKEVLGTCGSMGVTVEGK 140
>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
maripaludis
Length = 159
Score = 70.1 bits (164), Expect = 4e-11
Identities = 43/138 (31%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Frame = -1
Query: 452 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQ 279
++V + GG+ A L P IGPLG++ +V I T D++G+ + V++ V R
Sbjct: 4 QVVEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDYEGMSVPVKVIVDTDKRT 63
Query: 278 AQIAV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRSMARYLSG 102
++ V +P A+ALI + + ++ + + GNI++E +V IAK+ ++ +A L
Sbjct: 64 FEVEVGIPPASALIKKEIGIEKGSQEPKHQVA--GNITMEQIVKIAKMKQDAMLAYNLKN 121
Query: 101 SVKEILGTAQSVGCXCGG 48
+ KE++GT SVG G
Sbjct: 122 ASKEVVGTCVSVGISVEG 139
>UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal
protein L12; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L12 - Mus musculus
Length = 142
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/53 (58%), Positives = 41/53 (77%)
Frame = -1
Query: 206 KKQKNIKHNGNISLEDVVGIAKIMRNRSMARYLSGSVKEILGTAQSVGCXCGG 48
K QK+IKH+G+IS ++ V MR+RS+AR LSG++KEILGT+QSVGC G
Sbjct: 70 KNQKSIKHSGSISFDEFVNTVWQMRHRSLARELSGTIKEILGTSQSVGCNVDG 122
>UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15;
Archaea|Rep: 50S ribosomal protein L11P - Sulfolobus
acidocaldarius
Length = 170
Score = 62.5 bits (145), Expect = 7e-09
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Frame = -1
Query: 452 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI--TVQLTVQNRQ 279
K + + GG L P + LGL+ ++V I T+ +KG+ + T+++ ++
Sbjct: 4 KTIKIMVEGGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQFKGMSVPVTIEIDSSTKK 63
Query: 278 AQIAV-VPSAAALIIRALK-EPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRSMARYLS 105
I V VP+ +L+++A+ + P K I GN+ LE + IA + + A+ L+
Sbjct: 64 YDIKVGVPTTTSLLLKAINAQEPSGDPAHKKI---GNLDLEQIADIAIKKKPQLSAKTLT 120
Query: 104 GSVKEILGTAQSVGCXCGGQ 45
++K +LGTA+S+G G+
Sbjct: 121 AAIKSLLGTARSIGITVEGK 140
>UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L11P -
Nanoarchaeum equitans
Length = 160
Score = 61.7 bits (143), Expect = 1e-08
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Frame = -1
Query: 446 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQAQ 273
+ L GG+ + P + P ++P KV +I K T +++GL + V++ + + ++ +
Sbjct: 6 IRLLVTGGKATPGPPIGPALSPFKINPGKVVAEINKLTKEYEGLPVPVEIIINPETKEYK 65
Query: 272 IAV-VPSAAALIIRALKEPPRDRKKQKNIKH-NGNISLEDVVGIAKIMRNRSMARYLSGS 99
I V +P +AL+++A R Q+ + GN+S++DVV IAK + L +
Sbjct: 66 IIVGLPPTSALLMKAAGVT---RGPQRTVHEWVGNVSMKDVVEIAKKKIDSMPTSSLKAA 122
Query: 98 VKEILGTAQSVG 63
VK +LGTA++ G
Sbjct: 123 VKSVLGTARATG 134
>UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L11P -
Thermoplasma volcanium
Length = 158
Score = 59.3 bits (137), Expect = 7e-08
Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Frame = -1
Query: 428 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV---QNRQAQIAV-V 261
GG+ + P +GPLGL+ +V +I + T +++G+++ V +TV + ++ +I V V
Sbjct: 11 GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMQVPVTVTVIDPETKKYEITVGV 70
Query: 260 PSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRSMARYLSGSVKEILG 81
P +AL+ + L KK++ + GN +LE + +A +A+ L +V E+LG
Sbjct: 71 PPTSALLKKELGLEKGASKKKEAVA--GNATLEQIKNVAIKKMPSMLAKDLKSAVLEVLG 128
Query: 80 TAQSVGCXCGGQ 45
T ++G G+
Sbjct: 129 TCVAMGINVEGK 140
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 53.6 bits (123), Expect = 3e-06
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = +2
Query: 320 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 421
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>UniRef50_O83265 Cluster: 50S ribosomal protein L11; n=5;
Bacteria|Rep: 50S ribosomal protein L11 - Treponema
pallidum
Length = 146
Score = 39.9 bits (89), Expect = 0.045
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Frame = -1
Query: 446 VNLRCVGGEVGATSSLAPKIGPLGLS-PKKVGDDIAKATSDWKGLKITVQLTVQNRQAQI 270
+ L+C G+ + P +GP G+S P+ V + S GL + V +TV + ++
Sbjct: 11 IKLQCPAGKATPAPPVGPALGPHGVSAPQFVQQFNDRTKSMEPGLVVPVVVTVYSDKSFS 70
Query: 269 AVV--PSAAALIIRA--LKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRSMARYLSG 102
V+ P AA LI +A +++ + KQK + +SL + IA++ A L
Sbjct: 71 FVLKTPPAAVLIRKACGIEKGSTNSVKQKVAR----LSLAQLTEIAQVKLPDMSALTLDA 126
Query: 101 SVKEILGTAQSVG 63
+ + I GTA+S+G
Sbjct: 127 AKRIIAGTARSMG 139
>UniRef50_P05969 Cluster: 50S ribosomal protein L11P; n=7;
Halobacteriaceae|Rep: 50S ribosomal protein L11P -
Halobacterium salinarium (Halobacterium halobium)
Length = 163
Score = 39.5 bits (88), Expect = 0.060
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Frame = -1
Query: 446 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQA-QI 270
+ + GG+ L P++GP + + V +I T + G ++ V + ++ + I
Sbjct: 5 IEVLVAGGQADPGPPLGPELGPTPVDVQAVVQEINDQTEAFDGTEVPVTIEYEDDGSFSI 64
Query: 269 AV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRSMARYLSGSVK 93
V VP AAL+ + Q+N ++S+E + IA+ + +A + K
Sbjct: 65 EVGVPPTAALVKDEAGFDTGSGEPQENFV--ADLSIEQLKTIAEQKKPDLLAYDARNAAK 122
Query: 92 EILGTAQSVGCXCGGQAA 39
E+ GT S+G G+ A
Sbjct: 123 EVAGTCASLGVTIEGEDA 140
>UniRef50_Q7VRP3 Cluster: 50S ribosomal protein L11; n=4;
Bacteria|Rep: 50S ribosomal protein L11 - Blochmannia
floridanus
Length = 146
Score = 38.3 bits (85), Expect = 0.14
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Frame = -1
Query: 401 LAPKIGPLGLSPKKVGDDIAKATSDWK-GLKITVQLTVQ-NRQAQIAVVPSAAALIIRAL 228
+ P +G G++ K D T+D++ GL + V +TV +R + A +++
Sbjct: 26 IGPALGQQGINIMKFCKDFNTRTADFEMGLILPVVITVYVDRSFSFVIKTPTAVFLLKKA 85
Query: 227 KEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRSMARYLSGSVKEILGTAQSVG 63
+K K + G + + + IAKI + L + K I+GTA+S+G
Sbjct: 86 AGIKSGSEKPKCVSV-GKVLISQIYEIAKIKLIDMTSLNLESASKSIMGTARSIG 139
>UniRef50_Q21QS4 Cluster: Major facilitator superfamily MFS_1; n=1;
Rhodoferax ferrireducens T118|Rep: Major facilitator
superfamily MFS_1 - Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118)
Length = 381
Score = 37.5 bits (83), Expect = 0.24
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +1
Query: 118 AIDLFLMIFAMPTTSSREMLPLCLIFFCFLRSRGGSLRALMIRAAAEGT--TAIWACLF* 291
A LM+ P+TS +L L +F C G A + R A +GT TA CLF
Sbjct: 277 AASSILMVMLQPSTSPALVLTLVCVFGCTAIGWNGVYLAAVARQAPQGTAGTATAGCLFF 336
Query: 292 TVSCTVILRPFQSLVALAMSS 354
T V+ P +++ A+ +
Sbjct: 337 TYIGVVVSAPLFGVLSTALGN 357
>UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 260
Score = 37.5 bits (83), Expect = 0.24
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Frame = -1
Query: 446 VNLRCVGGEVGATSSLAPKIGPLGL-----SPKKVGDD-----IAKATSDWKGLKITVQL 297
V L C GGEVG+ S A + P + K VG+ +A W+ +
Sbjct: 98 VPLPCTGGEVGSKSEPAAAVAPAVIVDVKEEEKSVGNGGGGGGAQEAARWWRAGGADGGV 157
Query: 296 TVQNRQ-AQIAVVPSAAALIIRALKEPPRDRK 204
TVQ R+ A++AV P A A +RAL+ PPR K
Sbjct: 158 TVQPRERARVAVQP-ADARRLRALRAPPRQGK 188
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 36.7 bits (81), Expect = 0.42
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = +3
Query: 171 DVAVVFDIFLLFTVTGRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVT 332
++++ + +F LF T + + +D C G S++ L +++ +HS + T+P T
Sbjct: 288 ELSLYYKLFTLFKTTPKSEEKTDTMDCINGIRSFMMLQIISHHVHSAIRTIPTT 341
>UniRef50_Q2J5H8 Cluster: Ribosomal protein L11; n=1; Frankia sp.
CcI3|Rep: Ribosomal protein L11 - Frankia sp. (strain
CcI3)
Length = 165
Score = 35.1 bits (77), Expect = 1.3
Identities = 27/136 (19%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Frame = -1
Query: 449 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV-QNRQAQ 273
+V ++ GG + + +G G++ V + +A++ GL+++ +++ ++R +
Sbjct: 33 VVRIQQEGGNANV-AKIGQALGTYGVNIVGVMKEFNEASAIHHGLQVSADVSIFEDRSFE 91
Query: 272 IAVV-PSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRSMARYLSGSV 96
++V P+ +L+++A R + + +H G +++ + IAK+ + +
Sbjct: 92 LSVKSPATTSLLLQAAGV--RKGSPRPHAEHAGAVTVSQLREIAKVKLPDLNVDSMEAAE 149
Query: 95 KEILGTAQSVGCXCGG 48
K + GTA+S+G G
Sbjct: 150 KIVAGTARSMGIKVTG 165
>UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4;
Sophophora|Rep: CG31374-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 935
Score = 33.9 bits (74), Expect = 3.0
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = -1
Query: 371 SPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 192
SP ++ DDI K D + K + L ++NR+AQ A I E R++ ++KN
Sbjct: 536 SPDEL-DDIDKIRDDLQSTKQMLALELRNREAQDRENKKLLAKIRTLETELEREKSREKN 594
Query: 191 IKHNGNI 171
+++ N+
Sbjct: 595 LEYGSNV 601
>UniRef50_UPI000023D25B Cluster: hypothetical protein FG06262.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06262.1 - Gibberella zeae PH-1
Length = 441
Score = 33.5 bits (73), Expect = 3.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -1
Query: 239 IRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMRNRSMARYLSGSV 96
++ + PPR R+K +N K N +D G++K +R R GS+
Sbjct: 293 VQEVNTPPRKRRKSRNSKDAPNDETQDEAGVSKPVRRRKPKAERVGSI 340
>UniRef50_UPI00006615FB Cluster: Homolog of Homo sapiens "Splice
Isoform 2 of Nesprin 2; n=1; Takifugu rubripes|Rep:
Homolog of Homo sapiens "Splice Isoform 2 of Nesprin 2 -
Takifugu rubripes
Length = 4795
Score = 32.7 bits (71), Expect = 6.9
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Frame = -1
Query: 437 RCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVP 258
R G+V S +GP+ + P+ ++ S GL +T L +N+ A+++
Sbjct: 2236 RSKNGQVSIISETVQHLGPVNVEPQPSKKEVNSQNSSNTGLAVTAALVEENK-AKLSPTQ 2294
Query: 257 SAAALIIRALKEPPRDRKK--QKNIKHNG-NISLEDVVGIAKIMRNRSMA 117
+ + K PP K K IK G SLE G +R RS A
Sbjct: 2295 RKS----KGPKHPPEPATKGNGKAIKEAGRQQSLEKTEGKLTPLRRRSKA 2340
>UniRef50_A1Z7M5 Cluster: CG13744-PA; n=4; Diptera|Rep: CG13744-PA -
Drosophila melanogaster (Fruit fly)
Length = 389
Score = 32.7 bits (71), Expect = 6.9
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +1
Query: 82 PRISF--TEPERYRAIDLFLMIFAMPTTSSREMLPLCL 189
PR +F T+P+RY D+ L+ A PT+ + +LP+CL
Sbjct: 224 PRFNFRMTQPDRY---DIALLKLAQPTSFTEHILPICL 258
>UniRef50_UPI00006A17F2 Cluster: Ras and Rab interactor 2 (Ras
interaction/interference protein 2) (Ras inhibitor
JC265) (Ras association domain family 4).; n=2; Xenopus
tropicalis|Rep: Ras and Rab interactor 2 (Ras
interaction/interference protein 2) (Ras inhibitor
JC265) (Ras association domain family 4). - Xenopus
tropicalis
Length = 678
Score = 32.3 bits (70), Expect = 9.1
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -2
Query: 109 FLAQ*KRFLAQHSQLDVXVEGRPPHDLIDDINQRSL 2
F+ Q K +LAQ S+LD +E P D ID + ++++
Sbjct: 379 FMTQVKNYLAQSSELDPPIESLIPEDQIDVVLEKAM 414
>UniRef50_Q1ZDC0 Cluster: Putative uncharacterized protein; n=1;
Psychromonas sp. CNPT3|Rep: Putative uncharacterized
protein - Psychromonas sp. CNPT3
Length = 160
Score = 32.3 bits (70), Expect = 9.1
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = -1
Query: 311 ITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIAKIMR 132
+ V +T + R+ + P +AAL RALK D ++ HN N+++ V I++ +
Sbjct: 62 VMVPITFKAREGALGRHPPSAALTFRALKPGDPDIERPMIYDHNRNVNITKKVEISESL- 120
Query: 131 NRS 123
N+S
Sbjct: 121 NKS 123
>UniRef50_Q5CXY0 Cluster: Signal peptide-containing protein with
transmembrane domain; n=2; Cryptosporidium|Rep: Signal
peptide-containing protein with transmembrane domain -
Cryptosporidium parvum Iowa II
Length = 1633
Score = 32.3 bits (70), Expect = 9.1
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Frame = +3
Query: 108 KVPGH*SVSHDLRNADYIFKGDVAVVFDIFLLFTVTGRLLK-GSDDKGCCRGNNSYLGLS 284
++PG +S + + + G+ ++ F + GS C+ N +
Sbjct: 781 EIPGEVKISQSIVRPNIFYPGEYRAFGLAYIAFGDVAIATRIGSSAPEECK-NEWVINRK 839
Query: 285 VLNCQLHSDLETLPVTCGLGNVITHLFRRQTKRTDFRG 398
+ D+ T TC G+VITH+ + K+T+ G
Sbjct: 840 NKKLEKPKDVGTFAFTCPKGHVITHIHAKSNKKTELMG 877
>UniRef50_Q23KL5 Cluster: Protein kinase domain containing protein;
n=3; Oligohymenophorea|Rep: Protein kinase domain
containing protein - Tetrahymena thermophila SB210
Length = 629
Score = 32.3 bits (70), Expect = 9.1
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 215 RDRKKQKNIKHNGNISLEDVVGIAKIMRNRSMARYLSGS 99
RD K +KHNGNI + D G AK++ N ++ + GS
Sbjct: 161 RDFKLANILKHNGNIKIAD-FGFAKLLGNDNLTSTMLGS 198
>UniRef50_Q89W61 Cluster: 30S ribosomal protein S20; n=12;
Alphaproteobacteria|Rep: 30S ribosomal protein S20 -
Bradyrhizobium japonicum
Length = 88
Score = 32.3 bits (70), Expect = 9.1
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = -1
Query: 371 SPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 192
S KK IA+ T+ K + ++ V+N + I AAA+ A EP R Q+N
Sbjct: 6 SAKKATRKIARRTAVNKSRRTQMRGAVRNVEEAIKTGDRAAAVKALANAEPALMRAAQRN 65
Query: 191 IKHNGNIS 168
I H N S
Sbjct: 66 IIHKNNAS 73
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,617,476
Number of Sequences: 1657284
Number of extensions: 12857719
Number of successful extensions: 33946
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 32965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33928
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -