Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18a15
(842 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002594-1|AAH02594.1| 456|Homo sapiens dolichyl-diphosphooligo... 253 5e-67
AL391357-10|CAH73476.1| 456|Homo sapiens dolichyl-diphosphoolig... 253 5e-67
AB062391-1|BAB93478.1| 439|Homo sapiens dolichyl-diphosphooligo... 253 5e-67
D29643-1|BAA06126.1| 456|Homo sapiens KIAA0115 protein. 251 2e-66
D89060-1|BAA23670.1| 456|Homo sapiens oligosaccharyltransferase... 249 1e-65
BC109262-1|AAI09263.1| 507|Homo sapiens BTB (POZ) domain contai... 31 6.9
BC109261-1|AAI09262.1| 507|Homo sapiens BTB (POZ) domain contai... 31 6.9
AL135793-8|CAI95133.1| 506|Homo sapiens novel protein protein. 31 6.9
AK058088-1|BAB71658.1| 506|Homo sapiens protein ( Homo sapiens ... 31 6.9
AY596807-1|AAT42127.1| 634|Homo sapiens sodium-dependent amino ... 30 9.1
AY591756-1|AAT66171.1| 634|Homo sapiens system B0 neutral amino... 30 9.1
>BC002594-1|AAH02594.1| 456|Homo sapiens
dolichyl-diphosphooligosaccharide-protein
glycosyltransferase protein.
Length = 456
Score = 253 bits (620), Expect = 5e-67
Identities = 118/189 (62%), Positives = 142/189 (75%)
Frame = -3
Query: 720 DEAFNSPVTKVHGDKTKSDVSGNKILAIRLTEWVFGERGRLRVRNVDHHRQGEKEPSSAY 541
D FNS V K + +GN LA+ L+ WVF E G LRV V HHR GE P +AY
Sbjct: 266 DSFFNSAVQKAAPGSQRYSQTGNYELAVALSRWVFKEEGVLRVGPVSHHRVGETAPPNAY 325
Query: 540 TITDTVVYRIEIEELKNGKWQPFEANDVQLEFVRIDPFIRTTLQKKPNGVYEAVFKVPDV 361
T+TD V Y I I++L NGKW PF+ +D+QLEFVRIDPF+RT L+KK G Y FK+PDV
Sbjct: 326 TVTDLVEYSIVIQQLSNGKWVPFDGDDIQLEFVRIDPFVRTFLKKK-GGKYSVQFKLPDV 384
Query: 360 WGVYQFKVDYDRVGYTRLYHSTQVSVRPLQHTQYERFIPSAYPYYVSSFSMMIGVFLFSF 181
+GV+QFKVDY+R+GYT LY STQVSVRPLQHTQYERFIPSAYPYY S+FSMM+G+F+FS
Sbjct: 385 YGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMLGLFIFSI 444
Query: 180 VFLYYKEDQ 154
VFL+ KE +
Sbjct: 445 VFLHMKEKE 453
Score = 44.4 bits (100), Expect = 5e-04
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -2
Query: 817 PHAVGRKTVLIAALQARNNARIVF 746
PHAVG+ T+LIA LQARNNAR++F
Sbjct: 234 PHAVGKNTLLIAGLQARNNARVIF 257
>AL391357-10|CAH73476.1| 456|Homo sapiens
dolichyl-diphosphooligosaccharide-protein
glycosyltransferase protein.
Length = 456
Score = 253 bits (620), Expect = 5e-67
Identities = 118/189 (62%), Positives = 142/189 (75%)
Frame = -3
Query: 720 DEAFNSPVTKVHGDKTKSDVSGNKILAIRLTEWVFGERGRLRVRNVDHHRQGEKEPSSAY 541
D FNS V K + +GN LA+ L+ WVF E G LRV V HHR GE P +AY
Sbjct: 266 DSFFNSAVQKAAPGSQRYSQTGNYELAVALSRWVFKEEGVLRVGPVSHHRVGETAPPNAY 325
Query: 540 TITDTVVYRIEIEELKNGKWQPFEANDVQLEFVRIDPFIRTTLQKKPNGVYEAVFKVPDV 361
T+TD V Y I I++L NGKW PF+ +D+QLEFVRIDPF+RT L+KK G Y FK+PDV
Sbjct: 326 TVTDLVEYSIVIQQLSNGKWVPFDGDDIQLEFVRIDPFVRTFLKKK-GGKYSVQFKLPDV 384
Query: 360 WGVYQFKVDYDRVGYTRLYHSTQVSVRPLQHTQYERFIPSAYPYYVSSFSMMIGVFLFSF 181
+GV+QFKVDY+R+GYT LY STQVSVRPLQHTQYERFIPSAYPYY S+FSMM+G+F+FS
Sbjct: 385 YGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMLGLFIFSI 444
Query: 180 VFLYYKEDQ 154
VFL+ KE +
Sbjct: 445 VFLHMKEKE 453
Score = 44.4 bits (100), Expect = 5e-04
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -2
Query: 817 PHAVGRKTVLIAALQARNNARIVF 746
PHAVG+ T+LIA LQARNNAR++F
Sbjct: 234 PHAVGKNTLLIAGLQARNNARVIF 257
>AB062391-1|BAB93478.1| 439|Homo sapiens
dolichyl-diphosphooligosaccharide-protein
glycosyltransferase protein.
Length = 439
Score = 253 bits (620), Expect = 5e-67
Identities = 118/189 (62%), Positives = 142/189 (75%)
Frame = -3
Query: 720 DEAFNSPVTKVHGDKTKSDVSGNKILAIRLTEWVFGERGRLRVRNVDHHRQGEKEPSSAY 541
D FNS V K + +GN LA+ L+ WVF E G LRV V HHR GE P +AY
Sbjct: 249 DSFFNSAVQKAAPGSQRYSQTGNYELAVALSRWVFKEEGVLRVGPVSHHRVGETAPPNAY 308
Query: 540 TITDTVVYRIEIEELKNGKWQPFEANDVQLEFVRIDPFIRTTLQKKPNGVYEAVFKVPDV 361
T+TD V Y I I++L NGKW PF+ +D+QLEFVRIDPF+RT L+KK G Y FK+PDV
Sbjct: 309 TVTDLVEYSIVIQQLSNGKWVPFDGDDIQLEFVRIDPFVRTFLKKK-GGKYSVQFKLPDV 367
Query: 360 WGVYQFKVDYDRVGYTRLYHSTQVSVRPLQHTQYERFIPSAYPYYVSSFSMMIGVFLFSF 181
+GV+QFKVDY+R+GYT LY STQVSVRPLQHTQYERFIPSAYPYY S+FSMM+G+F+FS
Sbjct: 368 YGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMLGLFIFSI 427
Query: 180 VFLYYKEDQ 154
VFL+ KE +
Sbjct: 428 VFLHMKEKE 436
Score = 44.4 bits (100), Expect = 5e-04
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -2
Query: 817 PHAVGRKTVLIAALQARNNARIVF 746
PHAVG+ T+LIA LQARNNAR++F
Sbjct: 217 PHAVGKNTLLIAGLQARNNARVIF 240
>D29643-1|BAA06126.1| 456|Homo sapiens KIAA0115 protein.
Length = 456
Score = 251 bits (615), Expect = 2e-66
Identities = 117/189 (61%), Positives = 141/189 (74%)
Frame = -3
Query: 720 DEAFNSPVTKVHGDKTKSDVSGNKILAIRLTEWVFGERGRLRVRNVDHHRQGEKEPSSAY 541
D FNS V K + +GN LA+ L+ WVF E G LRV V HHR GE P +AY
Sbjct: 266 DSFFNSAVQKAAPGSQRYSQTGNYELAVALSRWVFKEEGVLRVGPVSHHRVGETAPPNAY 325
Query: 540 TITDTVVYRIEIEELKNGKWQPFEANDVQLEFVRIDPFIRTTLQKKPNGVYEAVFKVPDV 361
T+TD V Y I I++L NGKW PF+ +D+QLEFVRIDPF+RT L+KK G Y FK+PDV
Sbjct: 326 TVTDLVEYSIVIQQLSNGKWVPFDGDDIQLEFVRIDPFVRTFLKKK-GGKYSVQFKLPDV 384
Query: 360 WGVYQFKVDYDRVGYTRLYHSTQVSVRPLQHTQYERFIPSAYPYYVSSFSMMIGVFLFSF 181
+GV+QFKVDY+R+GYT LY STQVSVRPLQHTQYERFIPSAYPYY S+F MM+G+F+FS
Sbjct: 385 YGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFPMMLGLFIFSI 444
Query: 180 VFLYYKEDQ 154
VFL+ KE +
Sbjct: 445 VFLHMKEKE 453
Score = 44.4 bits (100), Expect = 5e-04
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -2
Query: 817 PHAVGRKTVLIAALQARNNARIVF 746
PHAVG+ T+LIA LQARNNAR++F
Sbjct: 234 PHAVGKNTLLIAGLQARNNARVIF 257
>D89060-1|BAA23670.1| 456|Homo sapiens oligosaccharyltransferase
protein.
Length = 456
Score = 249 bits (609), Expect = 1e-65
Identities = 116/189 (61%), Positives = 140/189 (74%)
Frame = -3
Query: 720 DEAFNSPVTKVHGDKTKSDVSGNKILAIRLTEWVFGERGRLRVRNVDHHRQGEKEPSSAY 541
D FNS V K + +GN LA+ L+ WVF E G LRV V HHR GE P +AY
Sbjct: 266 DSFFNSAVQKAAPGSQRYSQTGNYELAVALSRWVFKEEGVLRVGPVSHHRVGETAPPNAY 325
Query: 540 TITDTVVYRIEIEELKNGKWQPFEANDVQLEFVRIDPFIRTTLQKKPNGVYEAVFKVPDV 361
T+TD V Y I I++L N KW PF+ +D+QLEFVRIDPF+RT L+KK G Y FK+PDV
Sbjct: 326 TVTDLVEYSIVIQQLSNAKWVPFDGDDIQLEFVRIDPFVRTFLKKK-GGKYSVQFKLPDV 384
Query: 360 WGVYQFKVDYDRVGYTRLYHSTQVSVRPLQHTQYERFIPSAYPYYVSSFSMMIGVFLFSF 181
+GV+QFKVDY+R+GYT LY STQVSVRPLQHTQYERFIPSAYPYY S+F MM+G+F+FS
Sbjct: 385 YGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFPMMLGLFIFSI 444
Query: 180 VFLYYKEDQ 154
VFL+ KE +
Sbjct: 445 VFLHMKEKE 453
Score = 44.4 bits (100), Expect = 5e-04
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -2
Query: 817 PHAVGRKTVLIAALQARNNARIVF 746
PHAVG+ T+LIA LQARNNAR++F
Sbjct: 234 PHAVGKNTLLIAGLQARNNARVIF 257
>BC109262-1|AAI09263.1| 507|Homo sapiens BTB (POZ) domain
containing 16 protein.
Length = 507
Score = 30.7 bits (66), Expect = 6.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 525 VVYRIEIEELKNGKWQPFEANDVQLEF 445
V Y I E L +GKWQ F N ++ +F
Sbjct: 449 VKYEIRAEALVDGKWQEFRTNQIKQKF 475
>BC109261-1|AAI09262.1| 507|Homo sapiens BTB (POZ) domain
containing 16 protein.
Length = 507
Score = 30.7 bits (66), Expect = 6.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 525 VVYRIEIEELKNGKWQPFEANDVQLEF 445
V Y I E L +GKWQ F N ++ +F
Sbjct: 449 VKYEIRAEALVDGKWQEFRTNQIKQKF 475
>AL135793-8|CAI95133.1| 506|Homo sapiens novel protein protein.
Length = 506
Score = 30.7 bits (66), Expect = 6.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 525 VVYRIEIEELKNGKWQPFEANDVQLEF 445
V Y I E L +GKWQ F N ++ +F
Sbjct: 448 VKYEIRAEALVDGKWQEFRTNQIKQKF 474
>AK058088-1|BAB71658.1| 506|Homo sapiens protein ( Homo sapiens
cDNA FLJ25359 fis, clone TST01707. ).
Length = 506
Score = 30.7 bits (66), Expect = 6.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 525 VVYRIEIEELKNGKWQPFEANDVQLEF 445
V Y I E L +GKWQ F N ++ +F
Sbjct: 448 VKYEIRAEALVDGKWQEFRTNQIKQKF 474
>AY596807-1|AAT42127.1| 634|Homo sapiens sodium-dependent amino
acid transporter protein.
Length = 634
Score = 30.3 bits (65), Expect = 9.1
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -3
Query: 387 EAVFKVP--DVWGVYQFKVDYDRVGYTRLYHSTQVSVRPLQHTQYERFIPSAYPYYVSSF 214
EA+ K+P +W V F + + +G + ++ + + V PLQ R IP +P V +
Sbjct: 405 EAITKMPLSPLWSVLFFIMLFC-LGLSSMFGNMEGVVVPLQDL---RVIPPKWPKEVLTG 460
Query: 213 SMMIGVFLFSFVF 175
+ +G FL F+F
Sbjct: 461 LICLGTFLIGFIF 473
>AY591756-1|AAT66171.1| 634|Homo sapiens system B0 neutral amino
acid transporter protein.
Length = 634
Score = 30.3 bits (65), Expect = 9.1
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -3
Query: 387 EAVFKVP--DVWGVYQFKVDYDRVGYTRLYHSTQVSVRPLQHTQYERFIPSAYPYYVSSF 214
EA+ K+P +W V F + + +G + ++ + + V PLQ R IP +P V +
Sbjct: 405 EAITKMPLSPLWSVLFFIMLFC-LGLSSMFGNMEGVVVPLQDL---RVIPPKWPKEVLTG 460
Query: 213 SMMIGVFLFSFVF 175
+ +G FL F+F
Sbjct: 461 LICLGTFLIGFIF 473
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,651,400
Number of Sequences: 237096
Number of extensions: 2627397
Number of successful extensions: 4521
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4516
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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