Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18a06
(856 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D44466-1|BAA07918.1| 953|Homo sapiens proteasome subunit p112 p... 128 2e-40
BC114434-1|AAI14435.1| 953|Homo sapiens proteasome 26S non-ATPa... 128 2e-40
BC112344-1|AAI12345.1| 953|Homo sapiens proteasome (prosome, ma... 128 2e-40
BC094720-1|AAH94720.1| 953|Homo sapiens proteasome (prosome, ma... 128 2e-40
AC009407-1|AAX93127.1| 953|Homo sapiens unknown protein. 128 2e-40
BC073833-1|AAH73833.1| 865|Homo sapiens PSMD1 protein protein. 128 2e-29
BC001053-1|AAH01053.1| 869|Homo sapiens PSMD1 protein protein. 128 2e-29
BC047897-1|AAH47897.1| 844|Homo sapiens PSMD1 protein protein. 122 2e-27
BC020223-1|AAH20223.1| 856|Homo sapiens Unknown (protein for IM... 122 2e-27
BC014013-1|AAH14013.1| 848|Homo sapiens PSMD1 protein protein. 122 2e-27
BC039845-1|AAH39845.1| 825|Homo sapiens Similar to proteasome (... 110 5e-24
BC032445-1|AAH32445.1| 824|Homo sapiens PSMD1 protein protein. 110 5e-24
BC064398-1|AAH64398.1| 814|Homo sapiens PSMD1 protein protein. 80 9e-15
BC093777-1|AAH93777.1| 930|Homo sapiens ADAM metallopeptidase w... 35 0.43
BC093775-1|AAH93775.1| 930|Homo sapiens ADAM metallopeptidase w... 35 0.43
AP001697-2|BAA95503.1| 517|Homo sapiens disintegrin-like and me... 35 0.43
AF142099-1|AAD49577.1| 930|Homo sapiens aggrecanase-2 protein. 35 0.43
AF141293-1|AAF02493.1| 518|Homo sapiens ADAMTS5 protein protein. 35 0.43
AK131318-1|BAD18481.1| 276|Homo sapiens protein ( Homo sapiens ... 30 9.3
>D44466-1|BAA07918.1| 953|Homo sapiens proteasome subunit p112
protein.
Length = 953
Score = 128 bits (310), Expect(2) = 2e-40
Identities = 65/121 (53%), Positives = 83/121 (68%)
Frame = -1
Query: 856 GHXNMLAVVGMLVFTQYWYWFPLAHCLSLAFTPTCIISLNSDLKMPQLELKSNSKPSLYA 677
GH +M +VVG+LVFTQ+W+WFPL+H LSLA+TPTC+I LN DLKMP+++ KSN KPS +A
Sbjct: 753 GHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFA 812
Query: 676 YPAPLXXXXXXXXXRVTTAVLSIAAAKARRRAHGTDGXXXXXXXXXXSKMEVDEEEKKPS 497
YPAPL +V+TAVLSI AKA+++ + KMEVDE EKK
Sbjct: 813 YPAPLEVPKEKEKEKVSTAVLSI-TAKAKKKEKEKE-------KKEEEKMEVDEAEKKEE 864
Query: 496 K 494
K
Sbjct: 865 K 865
Score = 58.0 bits (134), Expect(2) = 2e-40
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = -1
Query: 376 FEILSNPARVMRQQLKNLTIVEGSGFTPLKDITIGGIVMLNHTGEGEQVLVEPV 215
F++L NPARVM QLK LT+ E + P K ++IGGI++L T E + LVEPV
Sbjct: 875 FQLLDNPARVMPAQLKVLTMPETCRYQPFKPLSIGGIIILKDTSEDIEELVEPV 928
>BC114434-1|AAI14435.1| 953|Homo sapiens proteasome 26S non-ATPase
subunit 1 protein.
Length = 953
Score = 128 bits (310), Expect(2) = 2e-40
Identities = 65/121 (53%), Positives = 83/121 (68%)
Frame = -1
Query: 856 GHXNMLAVVGMLVFTQYWYWFPLAHCLSLAFTPTCIISLNSDLKMPQLELKSNSKPSLYA 677
GH +M +VVG+LVFTQ+W+WFPL+H LSLA+TPTC+I LN DLKMP+++ KSN KPS +A
Sbjct: 753 GHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFA 812
Query: 676 YPAPLXXXXXXXXXRVTTAVLSIAAAKARRRAHGTDGXXXXXXXXXXSKMEVDEEEKKPS 497
YPAPL +V+TAVLSI AKA+++ + KMEVDE EKK
Sbjct: 813 YPAPLEVPKEKEKEKVSTAVLSI-TAKAKKKEKEKE-------KKEEEKMEVDEAEKKEE 864
Query: 496 K 494
K
Sbjct: 865 K 865
Score = 58.0 bits (134), Expect(2) = 2e-40
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = -1
Query: 376 FEILSNPARVMRQQLKNLTIVEGSGFTPLKDITIGGIVMLNHTGEGEQVLVEPV 215
F++L NPARVM QLK LT+ E + P K ++IGGI++L T E + LVEPV
Sbjct: 875 FQLLDNPARVMPAQLKVLTMPETCRYQPFKPLSIGGIIILKDTSEDIEELVEPV 928
>BC112344-1|AAI12345.1| 953|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 1 protein.
Length = 953
Score = 128 bits (310), Expect(2) = 2e-40
Identities = 65/121 (53%), Positives = 83/121 (68%)
Frame = -1
Query: 856 GHXNMLAVVGMLVFTQYWYWFPLAHCLSLAFTPTCIISLNSDLKMPQLELKSNSKPSLYA 677
GH +M +VVG+LVFTQ+W+WFPL+H LSLA+TPTC+I LN DLKMP+++ KSN KPS +A
Sbjct: 753 GHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFA 812
Query: 676 YPAPLXXXXXXXXXRVTTAVLSIAAAKARRRAHGTDGXXXXXXXXXXSKMEVDEEEKKPS 497
YPAPL +V+TAVLSI AKA+++ + KMEVDE EKK
Sbjct: 813 YPAPLEVPKEKEKEKVSTAVLSI-TAKAKKKEKEKE-------KKEEEKMEVDEAEKKEE 864
Query: 496 K 494
K
Sbjct: 865 K 865
Score = 58.0 bits (134), Expect(2) = 2e-40
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = -1
Query: 376 FEILSNPARVMRQQLKNLTIVEGSGFTPLKDITIGGIVMLNHTGEGEQVLVEPV 215
F++L NPARVM QLK LT+ E + P K ++IGGI++L T E + LVEPV
Sbjct: 875 FQLLDNPARVMPAQLKVLTMPETCRYQPFKPLSIGGIIILKDTSEDIEELVEPV 928
>BC094720-1|AAH94720.1| 953|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 1 protein.
Length = 953
Score = 128 bits (310), Expect(2) = 2e-40
Identities = 65/121 (53%), Positives = 83/121 (68%)
Frame = -1
Query: 856 GHXNMLAVVGMLVFTQYWYWFPLAHCLSLAFTPTCIISLNSDLKMPQLELKSNSKPSLYA 677
GH +M +VVG+LVFTQ+W+WFPL+H LSLA+TPTC+I LN DLKMP+++ KSN KPS +A
Sbjct: 753 GHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFA 812
Query: 676 YPAPLXXXXXXXXXRVTTAVLSIAAAKARRRAHGTDGXXXXXXXXXXSKMEVDEEEKKPS 497
YPAPL +V+TAVLSI AKA+++ + KMEVDE EKK
Sbjct: 813 YPAPLEVPKEKEKEKVSTAVLSI-TAKAKKKEKEKE-------KKEEEKMEVDEAEKKEE 864
Query: 496 K 494
K
Sbjct: 865 K 865
Score = 58.0 bits (134), Expect(2) = 2e-40
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = -1
Query: 376 FEILSNPARVMRQQLKNLTIVEGSGFTPLKDITIGGIVMLNHTGEGEQVLVEPV 215
F++L NPARVM QLK LT+ E + P K ++IGGI++L T E + LVEPV
Sbjct: 875 FQLLDNPARVMPAQLKVLTMPETCRYQPFKPLSIGGIIILKDTSEDIEELVEPV 928
>AC009407-1|AAX93127.1| 953|Homo sapiens unknown protein.
Length = 953
Score = 128 bits (310), Expect(2) = 2e-40
Identities = 65/121 (53%), Positives = 83/121 (68%)
Frame = -1
Query: 856 GHXNMLAVVGMLVFTQYWYWFPLAHCLSLAFTPTCIISLNSDLKMPQLELKSNSKPSLYA 677
GH +M +VVG+LVFTQ+W+WFPL+H LSLA+TPTC+I LN DLKMP+++ KSN KPS +A
Sbjct: 753 GHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFA 812
Query: 676 YPAPLXXXXXXXXXRVTTAVLSIAAAKARRRAHGTDGXXXXXXXXXXSKMEVDEEEKKPS 497
YPAPL +V+TAVLSI AKA+++ + KMEVDE EKK
Sbjct: 813 YPAPLEVPKEKEKEKVSTAVLSI-TAKAKKKEKEKE-------KKEEEKMEVDEAEKKEE 864
Query: 496 K 494
K
Sbjct: 865 K 865
Score = 58.0 bits (134), Expect(2) = 2e-40
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = -1
Query: 376 FEILSNPARVMRQQLKNLTIVEGSGFTPLKDITIGGIVMLNHTGEGEQVLVEPV 215
F++L NPARVM QLK LT+ E + P K ++IGGI++L T E + LVEPV
Sbjct: 875 FQLLDNPARVMPAQLKVLTMPETCRYQPFKPLSIGGIIILKDTSEDIEELVEPV 928
>BC073833-1|AAH73833.1| 865|Homo sapiens PSMD1 protein protein.
Length = 865
Score = 128 bits (310), Expect = 2e-29
Identities = 65/121 (53%), Positives = 83/121 (68%)
Frame = -1
Query: 856 GHXNMLAVVGMLVFTQYWYWFPLAHCLSLAFTPTCIISLNSDLKMPQLELKSNSKPSLYA 677
GH +M +VVG+LVFTQ+W+WFPL+H LSLA+TPTC+I LN DLKMP+++ KSN KPS +A
Sbjct: 753 GHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFA 812
Query: 676 YPAPLXXXXXXXXXRVTTAVLSIAAAKARRRAHGTDGXXXXXXXXXXSKMEVDEEEKKPS 497
YPAPL +V+TAVLSI AKA+++ + KMEVDE EKK
Sbjct: 813 YPAPLEVPKEKEKEKVSTAVLSI-TAKAKKKEKEKE-------KKEEEKMEVDEAEKKKK 864
Query: 496 K 494
K
Sbjct: 865 K 865
>BC001053-1|AAH01053.1| 869|Homo sapiens PSMD1 protein protein.
Length = 869
Score = 128 bits (310), Expect = 2e-29
Identities = 65/121 (53%), Positives = 83/121 (68%)
Frame = -1
Query: 856 GHXNMLAVVGMLVFTQYWYWFPLAHCLSLAFTPTCIISLNSDLKMPQLELKSNSKPSLYA 677
GH +M +VVG+LVFTQ+W+WFPL+H LSLA+TPTC+I LN DLKMP+++ KSN KPS +A
Sbjct: 753 GHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFA 812
Query: 676 YPAPLXXXXXXXXXRVTTAVLSIAAAKARRRAHGTDGXXXXXXXXXXSKMEVDEEEKKPS 497
YPAPL +V+TAVLSI AKA+++ + KMEVDE EKK
Sbjct: 813 YPAPLEVPKEKEKEKVSTAVLSI-TAKAKKKEKEKE-------KKEEEKMEVDEAEKKEE 864
Query: 496 K 494
K
Sbjct: 865 K 865
>BC047897-1|AAH47897.1| 844|Homo sapiens PSMD1 protein protein.
Length = 844
Score = 122 bits (293), Expect = 2e-27
Identities = 55/91 (60%), Positives = 72/91 (79%)
Frame = -1
Query: 856 GHXNMLAVVGMLVFTQYWYWFPLAHCLSLAFTPTCIISLNSDLKMPQLELKSNSKPSLYA 677
GH +M +VVG+LVFTQ+W+WFPL+H LSLA+TPTC+I LN DLKMP+++ KSN KPS +A
Sbjct: 753 GHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFA 812
Query: 676 YPAPLXXXXXXXXXRVTTAVLSIAAAKARRR 584
YPAPL +V+TAVLSI AKA+++
Sbjct: 813 YPAPLEVPKEKEKEKVSTAVLSI-TAKAKKK 842
>BC020223-1|AAH20223.1| 856|Homo sapiens Unknown (protein for
IMAGE:5087823) protein.
Length = 856
Score = 122 bits (293), Expect = 2e-27
Identities = 55/91 (60%), Positives = 72/91 (79%)
Frame = -1
Query: 856 GHXNMLAVVGMLVFTQYWYWFPLAHCLSLAFTPTCIISLNSDLKMPQLELKSNSKPSLYA 677
GH +M +VVG+LVFTQ+W+WFPL+H LSLA+TPTC+I LN DLKMP+++ KSN KPS +A
Sbjct: 753 GHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFA 812
Query: 676 YPAPLXXXXXXXXXRVTTAVLSIAAAKARRR 584
YPAPL +V+TAVLSI AKA+++
Sbjct: 813 YPAPLEVPKEKEKEKVSTAVLSI-TAKAKKK 842
>BC014013-1|AAH14013.1| 848|Homo sapiens PSMD1 protein protein.
Length = 848
Score = 122 bits (293), Expect = 2e-27
Identities = 55/91 (60%), Positives = 72/91 (79%)
Frame = -1
Query: 856 GHXNMLAVVGMLVFTQYWYWFPLAHCLSLAFTPTCIISLNSDLKMPQLELKSNSKPSLYA 677
GH +M +VVG+LVFTQ+W+WFPL+H LSLA+TPTC+I LN DLKMP+++ KSN KPS +A
Sbjct: 753 GHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFA 812
Query: 676 YPAPLXXXXXXXXXRVTTAVLSIAAAKARRR 584
YPAPL +V+TAVLSI AKA+++
Sbjct: 813 YPAPLEVPKEKEKEKVSTAVLSI-TAKAKKK 842
>BC039845-1|AAH39845.1| 825|Homo sapiens Similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 1 protein.
Length = 825
Score = 110 bits (265), Expect = 5e-24
Identities = 45/65 (69%), Positives = 57/65 (87%)
Frame = -1
Query: 856 GHXNMLAVVGMLVFTQYWYWFPLAHCLSLAFTPTCIISLNSDLKMPQLELKSNSKPSLYA 677
GH +M +VVG+LVFTQ+W+WFPL+H LSLA+TPTC+I LN DLKMP+++ KSN KPS +A
Sbjct: 753 GHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFA 812
Query: 676 YPAPL 662
YPAPL
Sbjct: 813 YPAPL 817
>BC032445-1|AAH32445.1| 824|Homo sapiens PSMD1 protein protein.
Length = 824
Score = 110 bits (265), Expect = 5e-24
Identities = 45/65 (69%), Positives = 57/65 (87%)
Frame = -1
Query: 856 GHXNMLAVVGMLVFTQYWYWFPLAHCLSLAFTPTCIISLNSDLKMPQLELKSNSKPSLYA 677
GH +M +VVG+LVFTQ+W+WFPL+H LSLA+TPTC+I LN DLKMP+++ KSN KPS +A
Sbjct: 753 GHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFA 812
Query: 676 YPAPL 662
YPAPL
Sbjct: 813 YPAPL 817
>BC064398-1|AAH64398.1| 814|Homo sapiens PSMD1 protein protein.
Length = 814
Score = 80.2 bits (189), Expect = 9e-15
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = -1
Query: 856 GHXNMLAVVGMLVFTQYWYWFPLAHCLSLAFTPTCIISLNSDLKMPQLELKSNSK 692
GH +M +VVG+LVFTQ+W+WFPL+H LSLA+TPTC+I LN DLK+ L +K
Sbjct: 753 GHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKVSTAVLSITAK 807
>BC093777-1|AAH93777.1| 930|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 5 (aggrecanase-2) protein.
Length = 930
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +2
Query: 668 SWIRVKRGLRVGLQFQLRHFKIGVK*NNTRWCKGKR*AV---CKWEPIPVLGKYQHTNDC 838
SW + R G+QF RH NN R+C GKR A+ C P P GK C
Sbjct: 575 SWGQCSRSCGGGVQFAYRHCNNPAPRNNGRYCTGKR-AIYRSCSLMPCPPNGKSFRHEQC 633
Query: 839 K 841
+
Sbjct: 634 E 634
>BC093775-1|AAH93775.1| 930|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 5 (aggrecanase-2) protein.
Length = 930
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +2
Query: 668 SWIRVKRGLRVGLQFQLRHFKIGVK*NNTRWCKGKR*AV---CKWEPIPVLGKYQHTNDC 838
SW + R G+QF RH NN R+C GKR A+ C P P GK C
Sbjct: 575 SWGQCSRSCGGGVQFAYRHCNNPAPRNNGRYCTGKR-AIYRSCSLMPCPPNGKSFRHEQC 633
Query: 839 K 841
+
Sbjct: 634 E 634
>AP001697-2|BAA95503.1| 517|Homo sapiens disintegrin-like and
metalloprotease with thrombospondin type 1 motif, 5
protein.
Length = 517
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +2
Query: 668 SWIRVKRGLRVGLQFQLRHFKIGVK*NNTRWCKGKR*AV---CKWEPIPVLGKYQHTNDC 838
SW + R G+QF RH NN R+C GKR A+ C P P GK C
Sbjct: 162 SWGQCSRSCGGGVQFAYRHCNNPAPRNNGRYCTGKR-AIYRSCSLMPCPPNGKSFRHEQC 220
Query: 839 K 841
+
Sbjct: 221 E 221
>AF142099-1|AAD49577.1| 930|Homo sapiens aggrecanase-2 protein.
Length = 930
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +2
Query: 668 SWIRVKRGLRVGLQFQLRHFKIGVK*NNTRWCKGKR*AV---CKWEPIPVLGKYQHTNDC 838
SW + R G+QF RH NN R+C GKR A+ C P P GK C
Sbjct: 575 SWGQCSRSCGGGVQFAYRHCNNPAPRNNGRYCTGKR-AIYRSCSLMPCPPNGKSFRHEQC 633
Query: 839 K 841
+
Sbjct: 634 E 634
>AF141293-1|AAF02493.1| 518|Homo sapiens ADAMTS5 protein protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +2
Query: 668 SWIRVKRGLRVGLQFQLRHFKIGVK*NNTRWCKGKR*AV---CKWEPIPVLGKYQHTNDC 838
SW + R G+QF RH NN R+C GKR A+ C P P GK C
Sbjct: 163 SWGQCSRSCGGGVQFAYRHCNNPAPRNNGRYCTGKR-AIYHSCSLMPCPPNGKSFRHEQC 221
Query: 839 K 841
+
Sbjct: 222 E 222
>AK131318-1|BAD18481.1| 276|Homo sapiens protein ( Homo sapiens
cDNA FLJ16314 fis, clone SPLEN2030847, highly similar
to Mus musculus Kif21b (Kif21b) mRNA. ).
Length = 276
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 228 RTCSPSPVWFNMTIPPIVISFKGVKPEPS 314
R CSP+P ++ I PI S GV P PS
Sbjct: 104 RPCSPTPAESSLDILPISPSLSGVTPVPS 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,804,255
Number of Sequences: 237096
Number of extensions: 1952047
Number of successful extensions: 4942
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4934
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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