Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17o18
         (776 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069198-1|AAL39343.1|  520|Drosophila melanogaster GH25591p pro...    29   5.4  
AE014134-184|AAN10492.1|  967|Drosophila melanogaster CG4226-PB,...    29   5.4  
AE014134-183|AAF51433.2|  967|Drosophila melanogaster CG4226-PA,...    29   5.4  
BT023859-1|AAZ86780.1|  316|Drosophila melanogaster IP09508p pro...    29   7.1  
AE013599-911|AAF58908.2|  322|Drosophila melanogaster CG10459-PA...    29   7.1  
AY075219-1|AAL68086.1|  299|Drosophila melanogaster AT16536p pro...    29   9.4  
AF237864-1|AAF44120.1|  313|Drosophila melanogaster Bcl-2-like p...    29   9.4  
AE013599-1336|AAF58628.3|  299|Drosophila melanogaster CG8238-PA...    29   9.4  

>AY069198-1|AAL39343.1|  520|Drosophila melanogaster GH25591p
           protein.
          Length = 520

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 364 GGEKYAIIIIKTFSLTFLKTKI*RIS 441
           GGE +  I+I  F +TFLKT + RIS
Sbjct: 132 GGEVWIWILISVFVMTFLKTIVARIS 157


>AE014134-184|AAN10492.1|  967|Drosophila melanogaster CG4226-PB,
           isoform B protein.
          Length = 967

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 364 GGEKYAIIIIKTFSLTFLKTKI*RIS 441
           GGE +  I+I  F +TFLKT + RIS
Sbjct: 579 GGEVWIWILISVFVMTFLKTIVARIS 604


>AE014134-183|AAF51433.2|  967|Drosophila melanogaster CG4226-PA,
           isoform A protein.
          Length = 967

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 364 GGEKYAIIIIKTFSLTFLKTKI*RIS 441
           GGE +  I+I  F +TFLKT + RIS
Sbjct: 579 GGEVWIWILISVFVMTFLKTIVARIS 604


>BT023859-1|AAZ86780.1|  316|Drosophila melanogaster IP09508p
           protein.
          Length = 316

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = +1

Query: 40  PIHSNSLNLYFANDIRI*LMVGPTIFILNYRIKVVKDTKLPQK*VNVTSSTN 195
           P H  SL L+ + DI      G  IF+     +V+K  KLP K    + S N
Sbjct: 180 PHHVKSLELHHSGDIVTIAYAGGVIFLDPKSFEVLKHRKLPYKVTAASLSPN 231


>AE013599-911|AAF58908.2|  322|Drosophila melanogaster CG10459-PA
           protein.
          Length = 322

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = +1

Query: 40  PIHSNSLNLYFANDIRI*LMVGPTIFILNYRIKVVKDTKLPQK*VNVTSSTN 195
           P H  SL L+ + DI      G  IF+     +V+K  KLP K    + S N
Sbjct: 186 PHHVKSLELHHSGDIVTIAYAGGVIFLDPKSFEVLKHRKLPYKVTAASLSPN 237


>AY075219-1|AAL68086.1|  299|Drosophila melanogaster AT16536p
           protein.
          Length = 299

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 221 SIVIGNVAPLKYIFNSLTYLLTLVYPAFVNKFTNS 325
           ++VIG V  L  +F  L ++  L+ P    +FTNS
Sbjct: 265 TLVIGVVFGLILVFMILRFIFNLIVPKIYQRFTNS 299


>AF237864-1|AAF44120.1|  313|Drosophila melanogaster Bcl-2-like
           protein BUFFY protein.
          Length = 313

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 221 SIVIGNVAPLKYIFNSLTYLLTLVYPAFVNKFTNS 325
           ++VIG V  L  +F  L ++  L+ P    +FTNS
Sbjct: 279 TLVIGVVFGLILVFMILRFIFNLIVPKIYQRFTNS 313


>AE013599-1336|AAF58628.3|  299|Drosophila melanogaster CG8238-PA
           protein.
          Length = 299

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 221 SIVIGNVAPLKYIFNSLTYLLTLVYPAFVNKFTNS 325
           ++VIG V  L  +F  L ++  L+ P    +FTNS
Sbjct: 265 TLVIGVVFGLILVFMILRFIFNLIVPKIYQRFTNS 299


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,637,730
Number of Sequences: 53049
Number of extensions: 504194
Number of successful extensions: 592
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)