Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17n09
(858 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 26 0.39
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 24 1.6
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 23 2.7
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 2.7
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 23 3.6
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 3.6
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 3.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 3.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 3.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 3.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 3.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 3.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 3.6
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 4.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 4.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 4.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 4.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 6.3
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 6.3
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 8.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 8.3
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 8.3
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 8.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 8.3
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 8.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 8.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 8.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 8.3
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 8.3
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 8.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 8.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 8.3
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 8.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 8.3
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 26.2 bits (55), Expect = 0.39
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 25 LSPYKNNSVQSSYHNYARFYFIYNVRQYFT-NY 120
+S NN S+Y+NY Y YN + Y+ NY
Sbjct: 82 ISSLSNNYNYSNYNNYNNNYNNYNKKLYYNINY 114
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 24.2 bits (50), Expect = 1.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 25 LSPYKNNSVQSSYHNYARFYFIYNVRQYFTNY 120
+S NN S+Y+NY Y YN Y NY
Sbjct: 315 ISSLSNNYKYSNYNNYNNNYNNYN--NYNNNY 344
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 332 KKNANLYSHHD 364
K+N + YSHHD
Sbjct: 2 KRNISSYSHHD 12
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 23.4 bits (48), Expect = 2.7
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 408 SRIYLLPSIFRLTSLLL*HCIILNYYMPS*QSIDLLSLQDFD 533
S+ Y LP +R L H ++LN Y S DL L++FD
Sbjct: 246 SKEYDLPD-YRGEEYLYSHKLLLNRYYLERLSNDLPHLEEFD 286
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.4 bits (48), Expect = 2.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 10 K*RQSLSPYKNNSVQSSYHNYARFYFIYNVRQYFTNY 120
K R+ +S NN ++ +NY Y YN + Y+ NY
Sbjct: 310 KERKIISSLSNNYNYNN-NNYKYNYNNYNKKLYYKNY 345
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 23.0 bits (47), Expect = 3.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 408 SRIYLLPSIFRLTSLLL*HCIILNYYMPS*QSIDLLSLQDFD 533
S+ Y LP +R L H ++LN Y S DL L++FD
Sbjct: 246 SKEYDLPD-YRGEEYLYSHKLLLNRYYLERLSNDLPYLEEFD 286
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 28 SPYKNNSVQSSYHNYARFYFIYN 96
S Y N + ++Y+NY + Y+ N
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 28 SPYKNNSVQSSYHNYARFYFIYN 96
S Y N + ++Y+NY + Y+ N
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 28 SPYKNNSVQSSYHNYARFYFIYN 96
S Y N + ++Y+NY + Y+ N
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 28 SPYKNNSVQSSYHNYARFYFIYN 96
S Y N + ++Y+NY + Y+ N
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 28 SPYKNNSVQSSYHNYARFYFIYN 96
S Y N + ++Y+NY + Y+ N
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 28 SPYKNNSVQSSYHNYARFYFIYN 96
S Y N + ++Y+NY + Y+ N
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 28 SPYKNNSVQSSYHNYARFYFIYN 96
S Y N + ++Y+NY + Y+ N
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 28 SPYKNNSVQSSYHNYARFYFIYN 96
S Y N + ++Y+NY + Y+ N
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNIN 114
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 20 NPFRLIKTIPYSHRITTMPDFTLFITY 100
+P R+ KTI RIT + +F+T+
Sbjct: 454 HPIRVAKTIDVIARITFPVAYFMFLTF 480
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 20 NPFRLIKTIPYSHRITTMPDFTLFITY 100
+P R+ KTI RIT + +F+T+
Sbjct: 440 HPIRVAKTIDVIARITFPVAYFMFLTF 466
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 20 NPFRLIKTIPYSHRITTMPDFTLFITY 100
+P R+ KTI RIT + +F+T+
Sbjct: 474 HPIRVAKTIDVIARITFPVAYFMFLTF 500
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 20 NPFRLIKTIPYSHRITTMPDFTLFITY 100
+P R+ KTI RIT + +F+T+
Sbjct: 423 HPIRVAKTIDVIARITFPVAYFMFLTF 449
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 6.3
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 606 KRGSRVVFVSSESHRFANLTNIFTNQNLAMTKDQYSAMMAYNNSKL-YNVITAKML 442
+R +SS S++ + N + N N + Y+ N KL YN+I + +
Sbjct: 307 ERSREPKIISSLSNKTIHNNNNYNNNNYNNNYNNYNNNNYNNYKKLYYNIINIEQI 362
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 6.3
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -1
Query: 243 LYFNNCFYCEESALARDKEIAQAV--YDMSLRL 151
L NN FY +E++ DK AQ D LRL
Sbjct: 1431 LLINNVFYEDETSCMLDKTRAQTFDGKDYPLRL 1463
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 34 YKNNSVQSSYHNYARFYFIYN 96
Y NN + HNY + Y+ N
Sbjct: 94 YNNNYNNYNKHNYNKLYYNIN 114
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 34 YKNNSVQSSYHNYARFYFIYN 96
Y NN + HNY + Y+ N
Sbjct: 94 YNNNYNNYNKHNYNKLYYNIN 114
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 34 YKNNSVQSSYHNYARFYFIYN 96
Y NN + HNY + Y+ N
Sbjct: 94 YNNNYNNYNKHNYNKLYYNIN 114
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 34 YKNNSVQSSYHNYARFYFIYN 96
Y NN + HNY + Y+ N
Sbjct: 94 YNNNYNNYNKHNYNKLYYNIN 114
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 34 YKNNSVQSSYHNYARFYFIYN 96
Y NN + HNY + Y+ N
Sbjct: 94 YNNNYNNYNKHNYNKLYYNIN 114
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 34 YKNNSVQSSYHNYARFYFIYN 96
Y NN + HNY + Y+ N
Sbjct: 94 YNNNYNNYNKHNYNKLYYNIN 114
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 34 YKNNSVQSSYHNYARFYFIYN 96
Y NN + HNY + Y+ N
Sbjct: 94 YNNNYNNYNKHNYNKLYYNIN 114
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 34 YKNNSVQSSYHNYARFYFIYN 96
Y NN + HNY + Y+ N
Sbjct: 94 YNNNYNNYNKHNYNKLYYNIN 114
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 34 YKNNSVQSSYHNYARFYFIYN 96
Y NN + HNY + Y+ N
Sbjct: 94 YNNNYNNYNKHNYNKLYYNIN 114
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 332 KKNANLYSHHD 364
K+N + YSHHD
Sbjct: 2 KRNISSYSHHD 12
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 332 KKNANLYSHHD 364
K+N + YSHHD
Sbjct: 2 KRNISSYSHHD 12
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 332 KKNANLYSHHD 364
K+N + YSHHD
Sbjct: 2 KRNISSYSHHD 12
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 332 KKNANLYSHHD 364
K+N + YSHHD
Sbjct: 2 KRNISSYSHHD 12
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 332 KKNANLYSHHD 364
K+N + YSHHD
Sbjct: 2 KRNISSYSHHD 12
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 332 KKNANLYSHHD 364
K+N + YSHHD
Sbjct: 2 KRNISSYSHHD 12
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 332 KKNANLYSHHD 364
K+N + YSHHD
Sbjct: 2 KRNISSYSHHD 12
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 332 KKNANLYSHHD 364
K+N + YSHHD
Sbjct: 2 KRNISSYSHHD 12
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 332 KKNANLYSHHD 364
K+N + YSHHD
Sbjct: 2 KRNISSYSHHD 12
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 332 KKNANLYSHHD 364
K+N + YSHHD
Sbjct: 2 KRNISSYSHHD 12
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 332 KKNANLYSHHD 364
K+N + YSHHD
Sbjct: 2 KRNISSYSHHD 12
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 34 YKNNSVQSSYHNYARFYFIYN 96
Y NN + HNY + Y+ N
Sbjct: 327 YNNNYNNYNKHNYNKLYYNIN 347
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 34 YKNNSVQSSYHNYARFYFIYN 96
Y NN + HNY + Y+ N
Sbjct: 327 YNNNYNNYNKHNYNKLYYNIN 347
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 332 KKNANLYSHHD 364
K+N + YSHHD
Sbjct: 2 KRNISSYSHHD 12
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 332 KKNANLYSHHD 364
K+N + YSHHD
Sbjct: 2 KRNISSYSHHD 12
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,402
Number of Sequences: 438
Number of extensions: 5050
Number of successful extensions: 76
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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