Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17m22
(792 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 335 2e-92
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 335 2e-92
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 334 3e-92
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 334 6e-92
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 328 3e-90
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 328 3e-90
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 327 5e-90
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 321 5e-88
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 318 2e-87
12_02_1282 + 27528159-27529148,27529549-27529614 262 2e-70
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 124 8e-29
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 122 2e-28
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 104 7e-23
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 104 7e-23
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 103 2e-22
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 83 3e-16
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 81 8e-16
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 76 4e-14
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937... 33 0.34
02_02_0520 + 11152718-11153600,11153736-11153917,11154160-111542... 32 0.60
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245... 31 0.79
08_02_0238 + 14665813-14668798,14669088-14669125 29 4.2
08_01_0311 - 2753062-2753232,2753340-2753381,2754490-2754667,275... 29 4.2
01_06_1741 + 39581656-39581680,39582627-39582697,39582779-395828... 29 4.2
07_03_0752 - 21241883-21242233,21242336-21242486,21242586-212428... 29 5.6
07_03_0008 + 12303536-12303893,12303910-12304176,12304635-123049... 28 7.4
05_04_0437 + 21234261-21234592,21234929-21234997,21235506-212356... 28 9.8
03_05_1049 - 29956379-29956400,29957103-29957188,29957269-299574... 28 9.8
02_05_0615 - 30364956-30365729,30365813-30366286 28 9.8
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 335 bits (824), Expect = 2e-92
Identities = 157/177 (88%), Positives = 166/177 (93%)
Frame = -2
Query: 791 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 612
SFTTTAEREIVRDIKEKL Y+ALD+EQE+ TA SSSS+EKSYELPDGQVITIG ERFRCP
Sbjct: 198 SFTTTAEREIVRDIKEKLAYIALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCP 257
Query: 611 EALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 432
E LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEIT
Sbjct: 258 EVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEIT 317
Query: 431 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 261
ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct: 318 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 374
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 335 bits (824), Expect = 2e-92
Identities = 155/177 (87%), Positives = 167/177 (94%)
Frame = -2
Query: 791 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 612
SFTTTAEREIVRD+KEKL Y+ALD++QEM TA +SSS+EKSYELPDGQVITIG ERFRCP
Sbjct: 201 SFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEKSYELPDGQVITIGAERFRCP 260
Query: 611 EALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 432
E LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEIT
Sbjct: 261 EVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEIT 320
Query: 431 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 261
ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 334 bits (822), Expect = 3e-92
Identities = 154/177 (87%), Positives = 167/177 (94%)
Frame = -2
Query: 791 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 612
SFTT+AEREIVRDIKEKL YVALD+EQE+ TA +SSS+EKSYELPDGQVITIG+ERFRCP
Sbjct: 201 SFTTSAEREIVRDIKEKLAYVALDYEQELETAKNSSSIEKSYELPDGQVITIGSERFRCP 260
Query: 611 EALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 432
E LFQPS +GME+ GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEIT
Sbjct: 261 EVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMSKEIT 320
Query: 431 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 261
ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 334 bits (820), Expect = 6e-92
Identities = 155/177 (87%), Positives = 166/177 (93%)
Frame = -2
Query: 791 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 612
SFTT+AEREIVRDIKEKL YVALD+EQE+ TA +SSS+EKSYELPDGQVITIG ERFRCP
Sbjct: 201 SFTTSAEREIVRDIKEKLAYVALDYEQELETAKNSSSVEKSYELPDGQVITIGAERFRCP 260
Query: 611 EALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 432
E LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEIT
Sbjct: 261 EVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEIT 320
Query: 431 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 261
ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 328 bits (806), Expect = 3e-90
Identities = 152/177 (85%), Positives = 166/177 (93%)
Frame = -2
Query: 791 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 612
SFTT+AEREIVRDIKEKL YVALD+EQE+ TA SSSS+EKSYELPDGQVITIG ERFRCP
Sbjct: 201 SFTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCP 260
Query: 611 EALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 432
E +FQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEIT
Sbjct: 261 EVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT 320
Query: 431 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 261
ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESGP+IVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 328 bits (806), Expect = 3e-90
Identities = 153/177 (86%), Positives = 162/177 (91%)
Frame = -2
Query: 791 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 612
SFTTTAEREIVRDIKEKL YVALD+EQE+ TA SSSS+EKSYELPDGQVITIG ERFRCP
Sbjct: 200 SFTTTAEREIVRDIKEKLAYVALDYEQELDTARSSSSIEKSYELPDGQVITIGAERFRCP 259
Query: 611 EALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 432
E LFQPSF+GMEA GIHE TYNSIMKCDVDIRKDLY N VLSGG+TM+PGI DRM KEIT
Sbjct: 260 EVLFQPSFIGMEAPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIGDRMSKEIT 319
Query: 431 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 261
ALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH KCF
Sbjct: 320 ALAPGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPGIVHMKCF 376
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 327 bits (804), Expect = 5e-90
Identities = 155/180 (86%), Positives = 166/180 (92%), Gaps = 3/180 (1%)
Frame = -2
Query: 791 SFTTTAEREIVRDIKEKLCYVALDFEQEM---ATAASSSSLEKSYELPDGQVITIGNERF 621
SFTTTAEREIVRDIKEKL YVALD+EQE+ A A +SSS+EKSYELPDGQVITIG ERF
Sbjct: 201 SFTTTAEREIVRDIKEKLAYVALDYEQELNAAAAAKNSSSVEKSYELPDGQVITIGAERF 260
Query: 620 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 441
RCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM K
Sbjct: 261 RCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSK 320
Query: 440 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 261
EITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 321 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVHRKCF 380
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 321 bits (788), Expect = 5e-88
Identities = 148/177 (83%), Positives = 163/177 (92%)
Frame = -2
Query: 791 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 612
S TT+AEREIVRDIKEKL YVALD+EQE+ T+ SSSS+EKSYE+PDGQVITIG+ERFRCP
Sbjct: 200 SLTTSAEREIVRDIKEKLAYVALDYEQELETSRSSSSVEKSYEMPDGQVITIGSERFRCP 259
Query: 611 EALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 432
E LFQPS +GME+ GIHE TYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEIT
Sbjct: 260 EVLFQPSLVGMESPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEIT 319
Query: 431 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 261
+LAPS+MK+K+IAPPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH KCF
Sbjct: 320 SLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPGIVHMKCF 376
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 318 bits (782), Expect = 2e-87
Identities = 156/191 (81%), Positives = 166/191 (86%), Gaps = 14/191 (7%)
Frame = -2
Query: 791 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 612
SFTTTAEREIVRDIKEKL YVALD+EQE+ A SSSS+EKSYELPDGQVITIG ERFRCP
Sbjct: 201 SFTTTAEREIVRDIKEKLAYVALDYEQELEAAKSSSSVEKSYELPDGQVITIGAERFRCP 260
Query: 611 EALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 432
E LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEIT
Sbjct: 261 EVLFQPSFIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT 320
Query: 431 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ--------------QMWISKQEYDE 294
ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQ QMWISK EYDE
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNLTPTLYEVARMQMWISKGEYDE 380
Query: 293 SGPSIVHRKCF 261
SGP+IVHRKCF
Sbjct: 381 SGPAIVHRKCF 391
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 262 bits (643), Expect = 2e-70
Identities = 133/177 (75%), Positives = 142/177 (80%)
Frame = -2
Query: 791 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 612
SFTTTAEREIVRD+KEKL Y+ALDF+QEMATAA+ SS+EKSYELPDGQVITIG ERFRCP
Sbjct: 201 SFTTTAEREIVRDVKEKLSYIALDFDQEMATAATGSSVEKSYELPDGQVITIGAERFRCP 260
Query: 611 EALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 432
E LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEIT
Sbjct: 261 EVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEIT 320
Query: 431 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 261
ALAPS+MKIK MWI+K EYDESGPSIVHRKCF
Sbjct: 321 ALAPSSMKIK--------------------------MWIAKAEYDESGPSIVHRKCF 351
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 124 bits (299), Expect = 8e-29
Identities = 70/177 (39%), Positives = 103/177 (58%), Gaps = 14/177 (7%)
Frame = -2
Query: 791 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 612
S+ R I DIKE +C V E+A A ++ SYELPDGQ I +G +RF+ P
Sbjct: 296 SYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTT---SYELPDGQTIEVGADRFKIP 352
Query: 611 EALFQPSFL-----------GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 465
+ LF PS M G+ +S+ +CDVDIRK+L ++ +LSGG++
Sbjct: 353 DILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKELLSSILLSGGSSSIL 412
Query: 464 GIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQE 303
+ +R++KE+ + ++K++A ER++SVWIGGSILASL +FQQMW SK +
Sbjct: 413 QLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAD 469
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 122 bits (295), Expect = 2e-28
Identities = 68/159 (42%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Frame = -2
Query: 716 EQEMATAASSSSLE-KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSI 540
E +MA A SS + + LPDGQVITI ER+ EALFQP LG+E GI S+
Sbjct: 241 EDQMAFEAIGSSCRPERHTLPDGQVITIEKERYIVGEALFQPHILGLEDYGIVHQLVTSV 300
Query: 539 MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE------RK 378
+ + L NT+L GGT G DR Q+E L+ S + ++ PPE +
Sbjct: 301 SNVTPEYHRQLLENTMLCGGTASMTGFEDRFQREAN-LSASAICPSLVKPPEYMPENLAR 359
Query: 377 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 261
YS W+GG+ILA + Q ++K +YDE+GPSIVH+KCF
Sbjct: 360 YSAWLGGAILAKVVFPQNQHVTKGDYDETGPSIVHKKCF 398
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 104 bits (250), Expect = 7e-23
Identities = 66/187 (35%), Positives = 103/187 (55%), Gaps = 40/187 (21%)
Frame = -2
Query: 779 TAEREIVRDIKEKLCYVAL---------------DFEQEMATAASSSSLEKSYELPDGQV 645
+A+ E VR+IKEKLCY++L D+++E ++ L KSY LPDG+V
Sbjct: 204 SADFETVREIKEKLCYLSLLSHFIELKRENMYSYDYKREYQLGLETTILVKSYTLPDGRV 263
Query: 644 ITIGNERFRCPEALFQP--------------SFLGMEACGIHETTYNSIMKCDVDIRKDL 507
I +G ERF+ PEALF P + +E G+ + + I + D+D R L
Sbjct: 264 IKVGTERFQAPEALFTPDQYQHNIDKTFVEQELIDVEGDGMADMAFRCIQEMDIDNRMTL 323
Query: 506 YANTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVWIG 360
Y + VLSGG+TMYPG+ R++KE+ L + ++++I PP RK+ V++G
Sbjct: 324 YQHIVLSGGSTMYPGLPSRLEKEMLDRYLDVVLKGNKDGLKKLRLRIEDPPRRKHMVYLG 383
Query: 359 GSILASL 339
G++LA +
Sbjct: 384 GAVLAGI 390
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 104 bits (250), Expect = 7e-23
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 6/179 (3%)
Frame = -2
Query: 779 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE------LPDGQVITIGNERFR 618
T ++ V+D+ E Y +L E SS S +E L + + + NERF
Sbjct: 251 TYKKGFVKDLDEACRYSSLPANGESVRKDSSDSDRSKFEDKKKPELSQNEFV-LTNERFL 309
Query: 617 CPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 438
PE LF P LGM G+ E +I C ++ L+ +L+GG+T++P +R++KE
Sbjct: 310 VPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKE 369
Query: 437 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 261
+ L P ++KIIA + W GGS+LA F+ M I+K EY+E G R+ F
Sbjct: 370 LRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
Score = 35.1 bits (77), Expect = 0.064
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -2
Query: 791 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSS---LEKSYELPDG 651
S E ++ D KEKLC+V+LD ++ A SS+ SY LPDG
Sbjct: 200 SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDG 249
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 103 bits (247), Expect = 2e-22
Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 10/173 (5%)
Frame = -2
Query: 761 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 582
VR IKEKLCYVA D+E E + S E+ T+ ERF+ E LFQP G
Sbjct: 315 VRTIKEKLCYVAADYEAE-----KRKDTQASCEVDGEGWFTLSEERFKTAEILFQPQIGG 369
Query: 581 MEACGIHETTYNSIMKC---DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM 411
+ A G+H+ + C +V + Y VLSGG++ PG+++R++KE+ L P+ +
Sbjct: 370 VRAMGLHKAVSLCMDHCYNSEVFGDDNWYKTVVLSGGSSCLPGLSERLEKELRELLPAHI 429
Query: 410 K--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEYDE----SGPSIVH 273
I++I PP S W G +++++STF + W I K+++ + +GPS V+
Sbjct: 430 SEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKTRRNGPSFVN 482
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 82.6 bits (195), Expect = 3e-16
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Frame = -2
Query: 644 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC--DVDIRKDLYANTVLSGGTTM 471
I+IG ERFRCPE LFQP +G++ GI E S+ + D +++ L + +++GG ++
Sbjct: 575 ISIGIERFRCPEILFQPGMIGIDQAGIDEMVSISLRRLMEDEAVKERLCQSILVTGGCSL 634
Query: 470 YPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 291
PG+ R++ I P +K++ + W G + A+ S F + S +Y E
Sbjct: 635 IPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREH 694
Query: 290 GPSIVHRK 267
G ++ HRK
Sbjct: 695 GENLFHRK 702
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 81.4 bits (192), Expect = 8e-16
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Frame = -2
Query: 767 EIVRDIKEKLCYVALDFEQEMATAASS--------SSLEKSYELPDGQVITIGNERFRCP 612
+I R +KE CY + D +E S+++ +P I IG ERF P
Sbjct: 246 DIARRVKEMYCYTSSDIVKEFKKHDKKPDKYIKHWSAIKPKTGVP--YTIDIGYERFLGP 303
Query: 611 EALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 435
E F P + + + E + + +D R+DLY N VLSGG+TM+ R+Q +I
Sbjct: 304 EIFFHPEIYSADFSTPLPELIDSCVQSAPIDTRRDLYKNIVLSGGSTMFKDFHKRLQNDI 363
Query: 434 TALAP--------------STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 297
+ +++ ++A P + Y+ W GGS+ AS F + +K+EY+
Sbjct: 364 KKIVDERVAATNARHHVEVKPVEVNVVAHPIQSYAAWFGGSVAASNPEFYESCHTKEEYE 423
Query: 296 ESGPSI 279
E G SI
Sbjct: 424 EHGASI 429
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 75.8 bits (178), Expect = 4e-14
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 23/186 (12%)
Frame = -2
Query: 767 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY----ELPDGQVIT--IGNERFRCPEA 606
++ R +KE CY D +E + + + G T IG ERF PE
Sbjct: 277 DVARRVKEMYCYTCSDIVKEFNKHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEI 336
Query: 605 LFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 429
F P + +H I +D R+ LY N VLSGG+TM+ R+Q+++
Sbjct: 337 FFHPEIYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKK 396
Query: 428 LAPS----------------TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 297
+ + +++ +++ P ++Y+VW GGS+LAS + F + +K EY+
Sbjct: 397 IVDARVLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYE 456
Query: 296 ESGPSI 279
E G SI
Sbjct: 457 EYGASI 462
>11_03_0057 +
9375083-9375088,9375904-9376031,9376107-9376166,
9376832-9376892,9377434-9377583,9377667-9377822,
9377905-9378116,9378572-9378673,9378785-9378924,
9379781-9379932
Length = 388
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = -2
Query: 566 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 387
I E Y I++ ++ ++ T +G MYP D +K+ L K APP
Sbjct: 226 IRELIYRDILEYHPNMLREYLEGTESAG--FMYPSAVDHFKKQFAYLEEHYAKGSTAAPP 283
Query: 386 ERKYSVWIGGSILAS 342
ER+++ S+L S
Sbjct: 284 ERQHNSLPRPSVLYS 298
>02_02_0520 +
11152718-11153600,11153736-11153917,11154160-11154249,
11154343-11154627,11154776-11154994,11155112-11155339
Length = 628
Score = 31.9 bits (69), Expect = 0.60
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = -2
Query: 716 EQEMATAASSSSLEKSY-ELPDGQ-VITIGNERFRCPEAL 603
E E++ A +K Y +L G+ V+++GNE+FRCP L
Sbjct: 7 ESELSDADIDDYADKCYMDLKSGKPVVSLGNEKFRCPFCL 46
>05_01_0311 +
2452230-2452232,2452401-2452809,2454136-2454263,
2455287-2455436,2455526-2455681,2455775-2455986,
2456306-2456407,2456517-2456653,2456769-2457055
Length = 527
Score = 31.5 bits (68), Expect = 0.79
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -2
Query: 566 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 387
I E Y I++ + ++ T +G MYP D +K+ L K APP
Sbjct: 321 IRELIYREILEYHPKMLREFLEGTESTG--FMYPSAVDHFKKQFAYLEEHYAKGSTAAPP 378
Query: 386 ERKYS 372
ER+++
Sbjct: 379 ERQHN 383
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 357 STDPYGVLPLWRSNDLNLHCRW-GESC 434
S DP G L W+ ND CRW G +C
Sbjct: 62 SNDPGGFLGSWKQNDSIGFCRWPGVTC 88
>08_01_0311 -
2753062-2753232,2753340-2753381,2754490-2754667,
2755021-2755118,2755964-2756098,2756280-2756444,
2756529-2756693,2757082-2757299,2758508-2758811
Length = 491
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 657 GKFVRLLEGAAGCSSGHLLLEVESDVAELLLDVTNDFPLGGGS 785
G+FV + E A G LL E+ D+ L N+ G GS
Sbjct: 414 GRFVTIEERAVADEDGQLLQEMHMDLCSLQATAKNEGSAGSGS 456
>01_06_1741 +
39581656-39581680,39582627-39582697,39582779-39582898,
39583034-39583094,39583186-39583242,39583413-39583600,
39583747-39583818,39583953-39584180
Length = 273
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -3
Query: 379 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQPAAGCSIQAC 200
+TPY + P +N ++ +A P A KRTA + + +AG + + C
Sbjct: 214 ATPYPAKQAKKTPV--NNDMAKQSSGYVHVATPYPAKQAKKRTANNDMSEHSAGYACKPC 271
Query: 199 N 197
N
Sbjct: 272 N 272
>07_03_0752 -
21241883-21242233,21242336-21242486,21242586-21242823,
21242917-21243127,21243214-21243344,21245046-21245931,
21246087-21246140,21246397-21246461,21246842-21246892,
21246960-21247029,21247493-21247597
Length = 770
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 226 RAAGGSGARCV*KHFLCTMEGPDS 297
RAAGG ARC+ LC E P S
Sbjct: 675 RAAGGEIARCIHVGLLCVQENPAS 698
>07_03_0008 +
12303536-12303893,12303910-12304176,12304635-12304951,
12304975-12305819,12305859-12306069
Length = 665
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 226 RAAGGSGARCV*KHFLCTM----EGPDSSYSCFEIHICWK 333
RA G CV + FLCT+ +G + C E H+ WK
Sbjct: 301 RALGWDKFACVDEPFLCTLLKVGDGVNFRLFCKEYHLSWK 340
>05_04_0437 +
21234261-21234592,21234929-21234997,21235506-21235629,
21235740-21235745
Length = 176
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = -3
Query: 367 GSVDRSSPPSLPSNKC----GSRNKSTTSLAPPLYTGSASKRTARRCLQQPAAGCS 212
G R PP PS+ G ++ + S A P+ S SKR RR ++ +GCS
Sbjct: 68 GEARRRIPPKAPSSDASLSDGGGSEGSDSGAAPIE--SPSKRPRRRLVEHGHSGCS 121
>03_05_1049 -
29956379-29956400,29957103-29957188,29957269-29957413,
29958518-29958813,29959242-29959253
Length = 186
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 373 PYGSVDRSSPPSLPSNKCGS 314
P+ V SSPP+LP KCG+
Sbjct: 72 PFVGVPPSSPPALPPIKCGA 91
>02_05_0615 - 30364956-30365729,30365813-30366286
Length = 415
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 331 SNKC-GSRNKSTTSLAPPLYTGSASKRTARRCLQQ 230
+N C G +T + APP Y AS RTA R L++
Sbjct: 256 NNDCHGGDPNATAATAPPEYAVRASFRTALRALRE 290
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,649,995
Number of Sequences: 37544
Number of extensions: 515235
Number of successful extensions: 1593
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1577
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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