Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17m11
(912 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D43949-1|BAA07893.2| 882|Homo sapiens KIAA0082 protein. 84 6e-16
BC031890-1|AAH31890.1| 835|Homo sapiens KIAA0082 protein. 84 6e-16
AL353597-2|CAI19603.1| 835|Homo sapiens KIAA0082 protein. 84 6e-16
BC035005-1|AAH35005.1| 770|Homo sapiens hypothetical protein FL... 73 1e-12
BC034468-1|AAH34468.1| 770|Homo sapiens FLJ11171 protein protein. 73 1e-12
AK023183-1|BAB14452.1| 586|Homo sapiens protein ( Homo sapiens ... 73 1e-12
AK002033-1|BAA92047.1| 770|Homo sapiens protein ( Homo sapiens ... 73 1e-12
AF458590-1|AAM49718.1| 340|Homo sapiens hypothetical protein pr... 69 2e-11
BC023584-1|AAH23584.1| 329|Homo sapiens FtsJ homolog 1 (E. coli... 57 8e-08
AJ005892-1|CAA06749.1| 329|Homo sapiens JM23 protein. 57 8e-08
AF063015-1|AAC33734.1| 327|Homo sapiens cell division protein p... 57 8e-08
AL353597-1|CAI19602.1| 372|Homo sapiens KIAA0082 protein. 53 1e-06
BC036710-1|AAH36710.1| 847|Homo sapiens FtsJ homolog 3 (E. coli... 38 0.051
AK027463-1|BAB55128.1| 493|Homo sapiens protein ( Homo sapiens ... 38 0.051
AF327355-1|AAL56015.1| 847|Homo sapiens hypothetical protein SB... 38 0.051
BC112107-1|AAI12108.1| 501|Homo sapiens tetratricopeptide repea... 32 3.3
BC105128-1|AAI05129.1| 501|Homo sapiens tetratricopeptide repea... 32 3.3
BC073796-1|AAH73796.1| 384|Homo sapiens TTC19 protein protein. 32 3.3
BC011698-1|AAH11698.2| 382|Homo sapiens TTC19 protein protein. 32 3.3
AK025958-1|BAB15296.1| 157|Homo sapiens protein ( Homo sapiens ... 32 3.3
AK000350-1|BAA91103.1| 273|Homo sapiens protein ( Homo sapiens ... 32 3.3
X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein. 31 5.8
BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein. 31 5.8
BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein. 31 5.8
AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein p... 31 5.8
BC035230-1|AAH35230.2| 409|Homo sapiens zinc finger, DHHC-type ... 31 7.7
>D43949-1|BAA07893.2| 882|Homo sapiens KIAA0082 protein.
Length = 882
Score = 84.2 bits (199), Expect = 6e-16
Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Frame = -3
Query: 559 FLDLCGGPGEFANYTMSLNPL-CKAYGVTLTN-NSVCVYKPTVCKRKNFTTITGP---DK 395
F D+C GPG F+ Y + K +G+TL N + + F G D
Sbjct: 320 FADVCAGPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGIDG 379
Query: 394 SGDVF-DKNVV----FEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLIL 230
GD+ +N+ F + ++ADG V G+EN QE L+ L++C+ + L
Sbjct: 380 DGDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMAL 439
Query: 229 ICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFN-KLV 53
+R GG+ + K FD F ++ ++ FE+ L+KP +SRPANSERY++C K+
Sbjct: 440 SIVRTGGHFICKTFDLFTPFSVGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVG 499
Query: 52 RPYCNDY---VNEWKNQLKN 2
DY VN NQL+N
Sbjct: 500 IDDVRDYLFAVNIKLNQLRN 519
>BC031890-1|AAH31890.1| 835|Homo sapiens KIAA0082 protein.
Length = 835
Score = 84.2 bits (199), Expect = 6e-16
Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Frame = -3
Query: 559 FLDLCGGPGEFANYTMSLNPL-CKAYGVTLTN-NSVCVYKPTVCKRKNFTTITGP---DK 395
F D+C GPG F+ Y + K +G+TL N + + F G D
Sbjct: 273 FADVCAGPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGIDG 332
Query: 394 SGDVF-DKNVV----FEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLIL 230
GD+ +N+ F + ++ADG V G+EN QE L+ L++C+ + L
Sbjct: 333 DGDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMAL 392
Query: 229 ICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFN-KLV 53
+R GG+ + K FD F ++ ++ FE+ L+KP +SRPANSERY++C K+
Sbjct: 393 SIVRTGGHFICKTFDLFTPFSVGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVG 452
Query: 52 RPYCNDY---VNEWKNQLKN 2
DY VN NQL+N
Sbjct: 453 IDDVRDYLFAVNIKLNQLRN 472
>AL353597-2|CAI19603.1| 835|Homo sapiens KIAA0082 protein.
Length = 835
Score = 84.2 bits (199), Expect = 6e-16
Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Frame = -3
Query: 559 FLDLCGGPGEFANYTMSLNPL-CKAYGVTLTN-NSVCVYKPTVCKRKNFTTITGP---DK 395
F D+C GPG F+ Y + K +G+TL N + + F G D
Sbjct: 273 FADVCAGPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGIDG 332
Query: 394 SGDVF-DKNVV----FEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLIL 230
GD+ +N+ F + ++ADG V G+EN QE L+ L++C+ + L
Sbjct: 333 DGDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMAL 392
Query: 229 ICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFN-KLV 53
+R GG+ + K FD F ++ ++ FE+ L+KP +SRPANSERY++C K+
Sbjct: 393 SIVRTGGHFICKTFDLFTPFSVGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVG 452
Query: 52 RPYCNDY---VNEWKNQLKN 2
DY VN NQL+N
Sbjct: 453 IDDVRDYLFAVNIKLNQLRN 472
>BC035005-1|AAH35005.1| 770|Homo sapiens hypothetical protein
FLJ11171 protein.
Length = 770
Score = 73.3 bits (172), Expect = 1e-12
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = -3
Query: 406 GPDKSGDVFDKNVVFEIS--IKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 233
GPD +GD+ + + I LV ADGS D G EQE L L CE
Sbjct: 203 GPDNTGDIMTLKFLTGLQNFISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTA 262
Query: 232 LICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFN 62
L L GG+ VLK+F FEH +I ++ F++ ++KP +S+ NSE Y++C +
Sbjct: 263 LTTLGNGGSFVLKMFTMFEHCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLH 319
>BC034468-1|AAH34468.1| 770|Homo sapiens FLJ11171 protein protein.
Length = 770
Score = 73.3 bits (172), Expect = 1e-12
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = -3
Query: 406 GPDKSGDVFDKNVVFEIS--IKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 233
GPD +GD+ + + I LV ADGS D G EQE L L CE
Sbjct: 203 GPDNTGDIMTLKFLTGLQNFISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTA 262
Query: 232 LICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFN 62
L L GG+ VLK+F FEH +I ++ F++ ++KP +S+ NSE Y++C +
Sbjct: 263 LTTLGNGGSFVLKMFTMFEHCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLH 319
>AK023183-1|BAB14452.1| 586|Homo sapiens protein ( Homo sapiens
cDNA FLJ13121 fis, clone NT2RP3002687. ).
Length = 586
Score = 73.3 bits (172), Expect = 1e-12
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = -3
Query: 406 GPDKSGDVFDKNVVFEIS--IKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 233
GPD +GD+ + + I LV ADGS D G EQE L L CE
Sbjct: 19 GPDNTGDIMTLKFLTGLQNFISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTA 78
Query: 232 LICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFN 62
L L GG+ VLK+F FEH +I ++ F++ ++KP +S+ NSE Y++C +
Sbjct: 79 LTTLGNGGSFVLKMFTMFEHCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLH 135
>AK002033-1|BAA92047.1| 770|Homo sapiens protein ( Homo sapiens
cDNA FLJ11171 fis, clone PLACE1007317, weakly similar to
Drosophila melanogaster Adrift mRNA. ).
Length = 770
Score = 73.3 bits (172), Expect = 1e-12
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = -3
Query: 406 GPDKSGDVFDKNVVFEIS--IKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 233
GPD +GD+ + + I LV ADGS D G EQE L L CE
Sbjct: 203 GPDNTGDIMTLKFLTGLQNFISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTA 262
Query: 232 LICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFN 62
L L GG+ VLK+F FEH +I ++ F++ ++KP +S+ NSE Y++C +
Sbjct: 263 LTTLGNGGSFVLKMFTMFEHCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLH 319
>AF458590-1|AAM49718.1| 340|Homo sapiens hypothetical protein
protein.
Length = 340
Score = 69.3 bits (162), Expect = 2e-11
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Frame = -3
Query: 406 GPDKSGDVFDKNVVFEIS--IKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 233
GPD +GD+ + + I LV ADGS D G EQE L L CE
Sbjct: 203 GPDNTGDIMTLKFLTGLQNIISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTA 262
Query: 232 LICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLI 71
L L GG+ VLK+F FEH +I ++ F++ ++KP +S+ NSE Y++
Sbjct: 263 LTTLGNGGSFVLKMFTMFEHCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVV 316
>BC023584-1|AAH23584.1| 329|Homo sapiens FtsJ homolog 1 (E. coli)
protein.
Length = 329
Score = 57.2 bits (132), Expect = 8e-08
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 3/190 (1%)
Frame = -3
Query: 628 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 449
R R KLL++DK+F + + V +DLC PG ++ L + G + + V V
Sbjct: 22 RARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQV------LSQKIGGQGSGHVVAVD 75
Query: 448 KPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKCGNAC--DLVLADGSVDVNGRENEQE 275
+ I GD+ + EI I+ C DLV+ DG+ DV G + E
Sbjct: 76 LQAMAPLPGVVQI-----QGDITQLSTAKEI-IQHFKGCPADLVVCDGAPDVTGLHDVDE 129
Query: 274 RLNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVL-YKPPSSR 98
+ L++ + L+PGG V K+ F + + +L + F VL KP SSR
Sbjct: 130 YMQAQLLLAALNIATHVLKPGGCFVAKI---FRGRDVTLLYSQLQVFFSSVLCAKPRSSR 186
Query: 97 PANSERYLIC 68
++ E + +C
Sbjct: 187 NSSIEAFAVC 196
>AJ005892-1|CAA06749.1| 329|Homo sapiens JM23 protein.
Length = 329
Score = 57.2 bits (132), Expect = 8e-08
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 3/190 (1%)
Frame = -3
Query: 628 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 449
R R KLL++DK+F + + V +DLC PG ++ L + G + + V V
Sbjct: 22 RARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQV------LSQKIGGQGSGHVVAVD 75
Query: 448 KPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKCGNAC--DLVLADGSVDVNGRENEQE 275
+ I GD+ + EI I+ C DLV+ DG+ DV G + E
Sbjct: 76 LQAMAPLPGVVQI-----QGDITQLSTAKEI-IQHFKGCPADLVVCDGAPDVTGLHDVDE 129
Query: 274 RLNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVL-YKPPSSR 98
+ L++ + L+PGG V K+ F + + +L + F VL KP SSR
Sbjct: 130 YMQAQLLLAALNIATHVLKPGGCFVAKI---FRGRDVTLLYSQLQVFFSSVLCAKPRSSR 186
Query: 97 PANSERYLIC 68
++ E + +C
Sbjct: 187 NSSIEAFAVC 196
>AF063015-1|AAC33734.1| 327|Homo sapiens cell division protein
protein.
Length = 327
Score = 57.2 bits (132), Expect = 8e-08
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 3/190 (1%)
Frame = -3
Query: 628 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 449
R R KLL++DK+F + + V +DLC PG ++ L + G + + V V
Sbjct: 22 RARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQV------LSQKIGGQGSGHVVAVD 75
Query: 448 KPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKCGNAC--DLVLADGSVDVNGRENEQE 275
+ I GD+ + EI I+ C DLV+ DG+ DV G + E
Sbjct: 76 LQAMAPLPGVVQI-----QGDITQLSTAKEI-IQHFKGCPADLVVCDGAPDVTGLHDVDE 129
Query: 274 RLNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVL-YKPPSSR 98
+ L++ + L+PGG V K+ F + + +L + F VL KP SSR
Sbjct: 130 YMQAQLLLAALNIATHVLKPGGCFVAKI---FRGRDVTLLYSQLQVFFSSVLCAKPRSSR 186
Query: 97 PANSERYLIC 68
++ E + +C
Sbjct: 187 NSSIEAFAVC 196
>AL353597-1|CAI19602.1| 372|Homo sapiens KIAA0082 protein.
Length = 372
Score = 53.2 bits (122), Expect = 1e-06
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Frame = -3
Query: 559 FLDLCGGPGEFANYTMSLNPL-CKAYGVTLTN-NSVCVYKPTVCKRKNFTTITGP---DK 395
F D+C GPG F+ Y + K +G+TL N + + F G D
Sbjct: 217 FADVCAGPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGIDG 276
Query: 394 SGDVF-DKNVV----FEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLIL 230
GD+ +N+ F + ++ADG V G+EN QE L+ L++C+ + L
Sbjct: 277 DGDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMAL 336
Query: 229 ICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEK 128
+R GG+ + K FD F ++ ++ FE+
Sbjct: 337 SIVRTGGHFICKTFDLFTPFSVGLVYLLYCCFER 370
>BC036710-1|AAH36710.1| 847|Homo sapiens FtsJ homolog 3 (E. coli)
protein.
Length = 847
Score = 37.9 bits (84), Expect = 0.051
Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 1/188 (0%)
Frame = -3
Query: 628 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAY-GVTLTNNSVCV 452
R R KL++++++F + LDLC PG + P+ GV L +
Sbjct: 25 RSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLV--PIKP 82
Query: 451 YKPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKCGNACDLVLADGSVDVNGRENEQER 272
V +++ TT ++ K +K D+VL DG+ +V
Sbjct: 83 LPNVVTLQEDITT----ERCRQALRKE------LKTWKV-DVVLNDGAPNVGASWVHDAY 131
Query: 271 LNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPA 92
L + +L L GG+ + KVF + +++ + + F F + KP +SR
Sbjct: 132 SQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWI--FQQLFRRVQATKPQASRHE 189
Query: 91 NSERYLIC 68
++E +++C
Sbjct: 190 SAEIFVVC 197
>AK027463-1|BAB55128.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ14557 fis, clone NT2RM2001896, weakly similar to
CELL DIVISION PROTEIN FTSJ. ).
Length = 493
Score = 37.9 bits (84), Expect = 0.051
Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 1/188 (0%)
Frame = -3
Query: 628 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAY-GVTLTNNSVCV 452
R R KL++++++F + LDLC PG + P+ GV L +
Sbjct: 25 RSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLV--PIKP 82
Query: 451 YKPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKCGNACDLVLADGSVDVNGRENEQER 272
V +++ TT ++ K +K D+VL DG+ +V
Sbjct: 83 LPNVVTLQEDITT----ERCRQALRKE------LKTWKV-DVVLNDGAPNVGASWVHDAY 131
Query: 271 LNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPA 92
L + +L L GG+ + KVF + +++ + + F F + KP +SR
Sbjct: 132 SQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWI--FQQLFRRVQATKPQASRHE 189
Query: 91 NSERYLIC 68
++E +++C
Sbjct: 190 SAEIFVVC 197
>AF327355-1|AAL56015.1| 847|Homo sapiens hypothetical protein SB92
protein.
Length = 847
Score = 37.9 bits (84), Expect = 0.051
Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 1/188 (0%)
Frame = -3
Query: 628 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAY-GVTLTNNSVCV 452
R R KL++++++F + LDLC PG + P+ GV L +
Sbjct: 25 RSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLV--PIKP 82
Query: 451 YKPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKCGNACDLVLADGSVDVNGRENEQER 272
V +++ TT ++ K +K D+VL DG+ +V
Sbjct: 83 LPNVVTLQEDITT----ERCRQALRKE------LKTWKV-DVVLNDGAPNVGASWVHDAY 131
Query: 271 LNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPA 92
L + +L L GG+ + KVF + +++ + + F F + KP +SR
Sbjct: 132 SQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWI--FQQLFRRVQATKPQASRHE 189
Query: 91 NSERYLIC 68
++E +++C
Sbjct: 190 SAEIFVVC 197
>BC112107-1|AAI12108.1| 501|Homo sapiens tetratricopeptide repeat
domain 19 protein.
Length = 501
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 667 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 554
CAR LF K+P++ R + K L+I ++ RH T +
Sbjct: 364 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 401
>BC105128-1|AAI05129.1| 501|Homo sapiens tetratricopeptide repeat
domain 19 protein.
Length = 501
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 667 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 554
CAR LF K+P++ R + K L+I ++ RH T +
Sbjct: 364 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 401
>BC073796-1|AAH73796.1| 384|Homo sapiens TTC19 protein protein.
Length = 384
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 667 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 554
CAR LF K+P++ R + K L+I ++ RH T +
Sbjct: 247 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 284
>BC011698-1|AAH11698.2| 382|Homo sapiens TTC19 protein protein.
Length = 382
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 667 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 554
CAR LF K+P++ R + K L+I ++ RH T +
Sbjct: 245 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 282
>AK025958-1|BAB15296.1| 157|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22305 fis, clone HRC04991. ).
Length = 157
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 667 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 554
CAR LF K+P++ R + K L+I ++ RH T +
Sbjct: 20 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 57
>AK000350-1|BAA91103.1| 273|Homo sapiens protein ( Homo sapiens
cDNA FLJ20343 fis, clone HEP13649. ).
Length = 273
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 667 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 554
CAR LF K+P++ R + K L+I ++ RH T +
Sbjct: 136 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 173
>X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein.
Length = 1028
Score = 31.1 bits (67), Expect = 5.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 112 PPSSRPANSERYLICFNKLVRPYCNDYVNEWKNQLK 5
PP+ R A+ +C +V YC EWK QL+
Sbjct: 802 PPALREASELLRELCIKNMVWKYCRSISPEWKQQLQ 837
>BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein.
Length = 1028
Score = 31.1 bits (67), Expect = 5.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 112 PPSSRPANSERYLICFNKLVRPYCNDYVNEWKNQLK 5
PP+ R A+ +C +V YC EWK QL+
Sbjct: 802 PPALREASELLRELCIKNMVWKYCRSISPEWKQQLQ 837
>BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein.
Length = 1028
Score = 31.1 bits (67), Expect = 5.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 112 PPSSRPANSERYLICFNKLVRPYCNDYVNEWKNQLK 5
PP+ R A+ +C +V YC EWK QL+
Sbjct: 802 PPALREASELLRELCIKNMVWKYCRSISPEWKQQLQ 837
>AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein
protein.
Length = 1097
Score = 31.1 bits (67), Expect = 5.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 112 PPSSRPANSERYLICFNKLVRPYCNDYVNEWKNQLK 5
PP+ R A+ +C +V YC EWK QL+
Sbjct: 871 PPALREASELLRELCIKNMVWKYCRSISPEWKQQLQ 906
>BC035230-1|AAH35230.2| 409|Homo sapiens zinc finger, DHHC-type
containing 23 protein.
Length = 409
Score = 30.7 bits (66), Expect = 7.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -3
Query: 580 VCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 449
+CR F L PG +ANY+ +L+ C Y V +T ++
Sbjct: 326 ICRDRSVFTALFYCPGVYANYSSALSFTCVWYSVIITAGMAYIF 369
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,920,390
Number of Sequences: 237096
Number of extensions: 2470136
Number of successful extensions: 5069
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5069
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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