Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17m11
(912 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-593|AAF45915.1| 788|Drosophila melanogaster CG6379-PA ... 98 2e-20
AY071576-1|AAL49198.1| 788|Drosophila melanogaster RE63452p pro... 96 5e-20
BT001481-1|AAN71236.1| 302|Drosophila melanogaster LD21957p pro... 69 9e-12
AE014297-2295|AAF55380.1| 302|Drosophila melanogaster CG5220-PA... 69 9e-12
AY050236-1|AAK84935.1| 700|Drosophila melanogaster SD02116p pro... 63 4e-10
AL035311-3|CAA22952.1| 700|Drosophila melanogaster EG:52C10.7 p... 63 4e-10
AF117649-1|AAD22030.1| 700|Drosophila melanogaster Adrift protein. 63 4e-10
AE013599-2565|AAF57788.1| 700|Drosophila melanogaster CG5032-PA... 63 4e-10
AE014297-2940|AAF55857.1| 320|Drosophila melanogaster CG7009-PA... 49 1e-05
AY119225-1|AAM51085.1| 324|Drosophila melanogaster SD16956p pro... 48 1e-05
AY069518-1|AAL39663.1| 817|Drosophila melanogaster LD23718p pro... 34 0.31
AE014298-2316|AAF48557.1| 817|Drosophila melanogaster CG8939-PA... 34 0.31
AE014134-670|AAF51066.3| 1802|Drosophila melanogaster CG31772-PA... 30 5.1
>AE014298-593|AAF45915.1| 788|Drosophila melanogaster CG6379-PA
protein.
Length = 788
Score = 97.9 bits (233), Expect = 2e-20
Identities = 58/170 (34%), Positives = 87/170 (51%), Gaps = 6/170 (3%)
Frame = -3
Query: 559 FLDLCGGPGEFANYTMSLNPL-CKAYGVTLTN-NSVCVYKPTVCKRKNFTTITGPDKSGD 386
F D+C GPG F+ Y + K +G TL N + K ++F T G + G+
Sbjct: 211 FTDMCAGPGGFSEYVLYRKSWEAKGFGFTLRGANDFKLEKFFAASPESFDTFYGVKEDGN 270
Query: 385 VFDKN----VVFEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLILICLR 218
+FD++ + I + +ADG V G++N QE L+ L +C+ L LR
Sbjct: 271 IFDESNQDSLNEYIRMHTPQGVHFAMADGGFSVEGQKNIQEILSKQLYLCQFLTALKILR 330
Query: 217 PGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLIC 68
P G+ V KVFD F ++ ++ F++ + KP SSRPANSERYL+C
Sbjct: 331 PNGSFVCKVFDLFTPFSVGLVYLMYKCFQQIAIIKPNSSRPANSERYLVC 380
>AY071576-1|AAL49198.1| 788|Drosophila melanogaster RE63452p
protein.
Length = 788
Score = 96.3 bits (229), Expect = 5e-20
Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Frame = -3
Query: 559 FLDLCGGPGEFANYTMSLNPL-CKAYGVTLTN-NSVCVYKPTVCKRKNFTTITGPDKSGD 386
F D+C GPG F+ Y + K G TL N + K ++F T G + G+
Sbjct: 211 FTDMCAGPGGFSEYVLYRKSWEAKGLGFTLRGANDFKLEKFFAASPESFDTFYGVKEDGN 270
Query: 385 VFDKN----VVFEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLILICLR 218
+FD++ + I + +ADG V G++N QE L+ L +C+ L LR
Sbjct: 271 IFDESNQDSLNEYIRMHTPQGVHFAMADGGFSVEGQKNIQEILSKQLYLCQFLTALKILR 330
Query: 217 PGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLIC 68
P G+ V KVFD F ++ ++ F++ + KP SSRPANSERYL+C
Sbjct: 331 PNGSFVCKVFDLFTPFSVGLVYLMYKCFQQIAIIKPNSSRPANSERYLVC 380
>BT001481-1|AAN71236.1| 302|Drosophila melanogaster LD21957p
protein.
Length = 302
Score = 68.9 bits (161), Expect = 9e-12
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Frame = -3
Query: 628 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 449
R R KLL +D+ + + V +DLC PG ++ K Y T++
Sbjct: 22 RARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSR-----KLYDTCETDDEKSAV 76
Query: 448 KPTVCKRKNFTTITGP-DKSGDVFDKNVVFEISIKCGN--ACDLVLADGSVDVNGRENEQ 278
K + I G GD+ ++ I G LV+ DG+ DV G
Sbjct: 77 KIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCDGAPDVTGVHEMD 136
Query: 277 ERLNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSR 98
E + L++ + L GG V K+F + T + ++ F+K+ +YKPPSSR
Sbjct: 137 EYMQHQLLVAALSIATCVLETGGTFVAKIFKG--NATSLLSSQMQIFFKKFDIYKPPSSR 194
Query: 97 PANSERYLIC 68
P++ E +++C
Sbjct: 195 PSSIEAFVVC 204
>AE014297-2295|AAF55380.1| 302|Drosophila melanogaster CG5220-PA
protein.
Length = 302
Score = 68.9 bits (161), Expect = 9e-12
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Frame = -3
Query: 628 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 449
R R KLL +D+ + + V +DLC PG ++ K Y T++
Sbjct: 22 RARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSR-----KLYDTCETDDEKSAV 76
Query: 448 KPTVCKRKNFTTITGP-DKSGDVFDKNVVFEISIKCGN--ACDLVLADGSVDVNGRENEQ 278
K + I G GD+ ++ I G LV+ DG+ DV G
Sbjct: 77 KIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCDGAPDVTGVHEMD 136
Query: 277 ERLNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSR 98
E + L++ + L GG V K+F + T + ++ F+K+ +YKPPSSR
Sbjct: 137 EYMQHQLLVAALSIATCVLETGGTFVAKIFKG--NATSLLSSQMQIFFKKFDIYKPPSSR 194
Query: 97 PANSERYLIC 68
P++ E +++C
Sbjct: 195 PSSIEAFVVC 204
>AY050236-1|AAK84935.1| 700|Drosophila melanogaster SD02116p
protein.
Length = 700
Score = 63.3 bits (147), Expect = 4e-10
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Frame = -3
Query: 400 DKSGDVFD----KNVVFEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 233
D +G++ D ++V ++ DLV ADGS+D + + QE + L E
Sbjct: 202 DLTGNLLDVANIDHLVERCEVEFQGQVDLVTADGSIDCAAQPDCQEEIVVRLFFAEVLSA 261
Query: 232 LICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFN 62
L L GGN ++K+F FE ++ +L FE+ ++KP +S+ NSE Y+IC N
Sbjct: 262 LRILSSGGNFLVKMFTLFEACSVSLLYTLNCIFEEVHIFKPATSKRGNSEVYVICLN 318
>AL035311-3|CAA22952.1| 700|Drosophila melanogaster EG:52C10.7
protein.
Length = 700
Score = 63.3 bits (147), Expect = 4e-10
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Frame = -3
Query: 400 DKSGDVFD----KNVVFEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 233
D +G++ D ++V ++ DLV ADGS+D + + QE + L E
Sbjct: 202 DLTGNLLDVANIDHLVERCEVEFQGQVDLVTADGSIDCAAQPDCQEEIVVRLFFAEVLSA 261
Query: 232 LICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFN 62
L L GGN ++K+F FE ++ +L FE+ ++KP +S+ NSE Y+IC N
Sbjct: 262 LRILSSGGNFLVKMFTLFEACSVSLLYTLNCIFEEVHIFKPATSKRGNSEVYVICLN 318
>AF117649-1|AAD22030.1| 700|Drosophila melanogaster Adrift protein.
Length = 700
Score = 63.3 bits (147), Expect = 4e-10
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Frame = -3
Query: 400 DKSGDVFD----KNVVFEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 233
D +G++ D ++V ++ DLV ADGS+D + + QE + L E
Sbjct: 202 DLTGNLLDVANIDHLVERCEVEFQGQVDLVTADGSIDCAAQPDCQEEIVVRLFFAEVLSA 261
Query: 232 LICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFN 62
L L GGN ++K+F FE ++ +L FE+ ++KP +S+ NSE Y+IC N
Sbjct: 262 LRILSSGGNFLVKMFTLFEACSVSLLYTLNCIFEEVHIFKPATSKRGNSEVYVICLN 318
>AE013599-2565|AAF57788.1| 700|Drosophila melanogaster CG5032-PA
protein.
Length = 700
Score = 63.3 bits (147), Expect = 4e-10
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Frame = -3
Query: 400 DKSGDVFD----KNVVFEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 233
D +G++ D ++V ++ DLV ADGS+D + + QE + L E
Sbjct: 202 DLTGNLLDVANIDHLVERCEVEFQGQVDLVTADGSIDCAAQPDCQEEIVVRLFFAEVLSA 261
Query: 232 LICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFN 62
L L GGN ++K+F FE ++ +L FE+ ++KP +S+ NSE Y+IC N
Sbjct: 262 LRILSSGGNFLVKMFTLFEACSVSLLYTLNCIFEEVHIFKPATSKRGNSEVYVICLN 318
>AE014297-2940|AAF55857.1| 320|Drosophila melanogaster CG7009-PA
protein.
Length = 320
Score = 48.8 bits (111), Expect = 1e-05
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 6/212 (2%)
Frame = -3
Query: 628 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 449
R R KLL+ D+ F + + +DLC PG ++ L K L
Sbjct: 22 RARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQV------LAKRLYEPLPPEEREKV 75
Query: 448 KPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKC--GNACDLVLADGSVDVNGRENEQE 275
K + I G + K E I+ G +V++DG+ D G +
Sbjct: 76 KIIAVDLQGMAPIEGVKQLRADISKESTAEAIIEFFGGEKAQIVVSDGAPDSTGMHDFDS 135
Query: 274 RLNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRP 95
+ +L++ + L GG+ V K++ A +T ++ + F+ ++KP +SR
Sbjct: 136 YVQGELLLSALSISTFILEEGGSFVSKIYRA--DRTSRLYTQLKRFFKNVCVFKPSASRN 193
Query: 94 ANSERYLI----CFNKLVRPYCNDYVNEWKNQ 11
++ E +++ C +P CN EW +Q
Sbjct: 194 SSIEAFVVAREFCLPDGYKP-CN-LTTEWHDQ 223
>AY119225-1|AAM51085.1| 324|Drosophila melanogaster SD16956p
protein.
Length = 324
Score = 48.4 bits (110), Expect = 1e-05
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 6/212 (2%)
Frame = -3
Query: 628 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 449
R R KLL+ D+ F + + +DLC PG ++ L K L
Sbjct: 22 RARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQV------LAKRLYEPLPPEEREKV 75
Query: 448 KPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKC--GNACDLVLADGSVDVNGRENEQE 275
K + I G + K E I+ G +V++DG+ D G +
Sbjct: 76 KIIAVDLQGMAPIEGVKQLRADISKESTAEAIIEFFGGEKAQIVVSDGAPDSTGMHDFDS 135
Query: 274 RLNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRP 95
+ +L++ + L GG+ V K++ A +T ++ + F+ ++KP +SR
Sbjct: 136 YVQGELLLSALSISTFILEEGGSFVSKIYRA--DRTSRLYTQLKRFFKDVCVFKPSASRN 193
Query: 94 ANSERYLI----CFNKLVRPYCNDYVNEWKNQ 11
++ E +++ C +P CN EW +Q
Sbjct: 194 SSIEAFVVAREFCLPDGYKP-CN-LTTEWHDQ 223
>AY069518-1|AAL39663.1| 817|Drosophila melanogaster LD23718p
protein.
Length = 817
Score = 33.9 bits (74), Expect = 0.31
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 1/188 (0%)
Frame = -3
Query: 628 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCK-AYGVTLTNNSVCV 452
R R KL+++++KF + LDLC PG + P+ GV L +
Sbjct: 25 RSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVSSIVIGVDLF--PIRP 82
Query: 451 YKPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKCGNACDLVLADGSVDVNGRENEQER 272
+ ++ TT +K K + S K D+VL DG+ +V
Sbjct: 83 IAGCIGLVEDITT----EKCRQSLTKELQ---SWKA----DVVLHDGAPNVGRNWLYDAY 131
Query: 271 LNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPA 92
L + +L LR GG V KVF + ++ + + K + F+K KP +SR
Sbjct: 132 QQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQL--FKKVHATKPSASRKE 189
Query: 91 NSERYLIC 68
++E +++C
Sbjct: 190 SAEIFVVC 197
>AE014298-2316|AAF48557.1| 817|Drosophila melanogaster CG8939-PA
protein.
Length = 817
Score = 33.9 bits (74), Expect = 0.31
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 1/188 (0%)
Frame = -3
Query: 628 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCK-AYGVTLTNNSVCV 452
R R KL+++++KF + LDLC PG + P+ GV L +
Sbjct: 25 RSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVSSIVIGVDLF--PIRP 82
Query: 451 YKPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKCGNACDLVLADGSVDVNGRENEQER 272
+ ++ TT +K K + S K D+VL DG+ +V
Sbjct: 83 IAGCIGLVEDITT----EKCRQSLTKELQ---SWKA----DVVLHDGAPNVGRNWLYDAY 131
Query: 271 LNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPA 92
L + +L LR GG V KVF + ++ + + K + F+K KP +SR
Sbjct: 132 QQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQL--FKKVHATKPSASRKE 189
Query: 91 NSERYLIC 68
++E +++C
Sbjct: 190 SAEIFVVC 197
>AE014134-670|AAF51066.3| 1802|Drosophila melanogaster CG31772-PA
protein.
Length = 1802
Score = 29.9 bits (64), Expect = 5.1
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +3
Query: 495 QSGFNDMV*LANSPGPPHRSKNVSTCRQT 581
Q G+N V LA SP PPHR K VS QT
Sbjct: 171 QLGYNTQV-LALSPRPPHRIKVVSQGAQT 198
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,772,457
Number of Sequences: 53049
Number of extensions: 817674
Number of successful extensions: 1923
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1917
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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