Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17m07
         (323 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M60234-1|AAA35910.1|  830|Homo sapiens granule membrane protein-...    30   1.8  
M25322-1|AAA35911.1|  830|Homo sapiens protein ( Human granule m...    30   1.8  
Z99572-8|CAI23064.1|  753|Homo sapiens selectin P (granule membr...    28   7.4  
Z99572-7|CAI23063.1|  829|Homo sapiens selectin P (granule membr...    28   7.4  
Z99572-6|CAI23062.1|  645|Homo sapiens selectin P (granule membr...    28   7.4  
Z99572-5|CAI23058.1|  830|Homo sapiens selectin P (granule membr...    28   7.4  
Z99572-4|CAI23060.1|  646|Homo sapiens selectin P (granule membr...    28   7.4  
Z99572-2|CAI23059.1|  644|Homo sapiens selectin P (granule membr...    28   7.4  
Z99572-1|CAI23061.1|  768|Homo sapiens selectin P (granule membr...    28   7.4  
BC068533-1|AAH68533.1|  829|Homo sapiens selectin P (granule mem...    28   7.4  
BC028067-1|AAH28067.2|  789|Homo sapiens SELP protein protein.         28   7.4  
AL022146-8|CAI22758.1|  753|Homo sapiens selectin P (granule mem...    28   7.4  
AL022146-7|CAI22757.1|  829|Homo sapiens selectin P (granule mem...    28   7.4  
AL022146-6|CAI22756.1|  645|Homo sapiens selectin P (granule mem...    28   7.4  
AL022146-5|CAI22753.1|  830|Homo sapiens selectin P (granule mem...    28   7.4  
AL022146-4|CAI22755.1|  646|Homo sapiens selectin P (granule mem...    28   7.4  
AL022146-2|CAI22754.1|  644|Homo sapiens selectin P (granule mem...    28   7.4  
AL022146-1|CAI22751.1|  768|Homo sapiens selectin P (granule mem...    28   7.4  
AF542391-1|AAN06828.1|  830|Homo sapiens selectin P (granule mem...    28   7.4  

>M60234-1|AAA35910.1|  830|Homo sapiens granule membrane protein-140
           protein.
          Length = 830

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+IC+H+ K F+H   C
Sbjct: 261 QCPPLKI--PERGNMICLHSAKAFQHQSSC 288


>M25322-1|AAA35911.1|  830|Homo sapiens protein ( Human granule
           membrane protein-140 mRNA, complete cds. ).
          Length = 830

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+IC+H+ K F+H   C
Sbjct: 261 QCPPLKI--PERGNMICLHSAKAFQHQSSC 288


>Z99572-8|CAI23064.1|  753|Homo sapiens selectin P (granule membrane
           protein 140kDa, antigen CD62) protein.
          Length = 753

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 246 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 273


>Z99572-7|CAI23063.1|  829|Homo sapiens selectin P (granule membrane
           protein 140kDa, antigen CD62) protein.
          Length = 829

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 260 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 287


>Z99572-6|CAI23062.1|  645|Homo sapiens selectin P (granule membrane
           protein 140kDa, antigen CD62) protein.
          Length = 645

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 260 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 287


>Z99572-5|CAI23058.1|  830|Homo sapiens selectin P (granule membrane
           protein 140kDa, antigen CD62) protein.
          Length = 830

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 261 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 288


>Z99572-4|CAI23060.1|  646|Homo sapiens selectin P (granule membrane
           protein 140kDa, antigen CD62) protein.
          Length = 646

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 261 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 288


>Z99572-2|CAI23059.1|  644|Homo sapiens selectin P (granule membrane
           protein 140kDa, antigen CD62) protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 261 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 288


>Z99572-1|CAI23061.1|  768|Homo sapiens selectin P (granule membrane
           protein 140kDa, antigen CD62) protein.
          Length = 768

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 261 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 288


>BC068533-1|AAH68533.1|  829|Homo sapiens selectin P (granule
           membrane protein 140kDa, antigen CD62) protein.
          Length = 829

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 261 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 288


>BC028067-1|AAH28067.2|  789|Homo sapiens SELP protein protein.
          Length = 789

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 260 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 287


>AL022146-8|CAI22758.1|  753|Homo sapiens selectin P (granule
           membrane protein 140kDa, antigen CD62) protein.
          Length = 753

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 246 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 273


>AL022146-7|CAI22757.1|  829|Homo sapiens selectin P (granule
           membrane protein 140kDa, antigen CD62) protein.
          Length = 829

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 260 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 287


>AL022146-6|CAI22756.1|  645|Homo sapiens selectin P (granule
           membrane protein 140kDa, antigen CD62) protein.
          Length = 645

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 260 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 287


>AL022146-5|CAI22753.1|  830|Homo sapiens selectin P (granule
           membrane protein 140kDa, antigen CD62) protein.
          Length = 830

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 261 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 288


>AL022146-4|CAI22755.1|  646|Homo sapiens selectin P (granule
           membrane protein 140kDa, antigen CD62) protein.
          Length = 646

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 261 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 288


>AL022146-2|CAI22754.1|  644|Homo sapiens selectin P (granule
           membrane protein 140kDa, antigen CD62) protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 261 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 288


>AL022146-1|CAI22751.1|  768|Homo sapiens selectin P (granule
           membrane protein 140kDa, antigen CD62) protein.
          Length = 768

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 261 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 288


>AF542391-1|AAN06828.1|  830|Homo sapiens selectin P (granule
           membrane protein 140kDa, antigen CD62) protein.
          Length = 830

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 KCPNPKFLTPMTSNLICVHANKIFRHYDQC 266
           +CP  K   P   N+ C+H+ K F+H   C
Sbjct: 261 QCPPLKI--PERGNMTCLHSAKAFQHQSSC 288


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,638,011
Number of Sequences: 237096
Number of extensions: 702160
Number of successful extensions: 1099
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)