Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17m01
         (778 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF299350-1|AAK96045.1| 1610|Homo sapiens testicular soluble aden...    34   0.66 
BC015312-1|AAH15312.1|  464|Homo sapiens zinc finger protein 669...    31   6.1  
AL627095-3|CAH70015.1|  464|Homo sapiens zinc finger protein 669...    31   6.1  
AK022668-1|BAB14166.1|  464|Homo sapiens protein ( Homo sapiens ...    31   6.1  

>AF299350-1|AAK96045.1| 1610|Homo sapiens testicular soluble adenylyl
            cyclase protein.
          Length = 1610

 Score = 33.9 bits (74), Expect = 0.66
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
 Frame = -1

Query: 550  VELGNLS*VVWSAVGIHLFLSPSSHAIRFVQPLYKLCNCLIQLNLRPSRAKEPS-LSSTN 374
            +ELG+ +  +W+     L  +P+ H     Q L +L  CL+  +  P   + P  L   +
Sbjct: 1316 IELGSRALQMWA-----LLQNPNRH----YQSLCRLSRCLLLNSRYPQLIQVPGRLWELS 1366

Query: 373  TSFAHL-SKSFFFFSCIRVILY 311
             +  H+ SK+FF+F C+ ++LY
Sbjct: 1367 VTQEHIFSKAFFYFVCLDILLY 1388


>BC015312-1|AAH15312.1|  464|Homo sapiens zinc finger protein 669
           protein.
          Length = 464

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = -1

Query: 520 WSAVGIHLFLSPSSHAIRFVQPLYKLCNCLIQLNLRPSRAKEPSLSSTNTSFA 362
           W + G  LF S    A R  +PL+ +C C      RP   +EP  S    S A
Sbjct: 40  WRSRGSVLFCSGPGRAGRAAEPLHPVCTCGRHFR-RPDPCREPLASPIQDSVA 91


>AL627095-3|CAH70015.1|  464|Homo sapiens zinc finger protein 669
           protein.
          Length = 464

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = -1

Query: 520 WSAVGIHLFLSPSSHAIRFVQPLYKLCNCLIQLNLRPSRAKEPSLSSTNTSFA 362
           W + G  LF S    A R  +PL+ +C C      RP   +EP  S    S A
Sbjct: 40  WRSRGSVLFCSGPGRAGRAAEPLHPVCTCGRHFR-RPEPCREPLASPIQDSVA 91


>AK022668-1|BAB14166.1|  464|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12606 fis, clone NT2RM4001483, moderately
           similar to ZINC FINGER PROTEIN 136. ).
          Length = 464

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = -1

Query: 520 WSAVGIHLFLSPSSHAIRFVQPLYKLCNCLIQLNLRPSRAKEPSLSSTNTSFA 362
           W + G  LF S    A R  +PL+ +C C      RP   +EP  S    S A
Sbjct: 40  WRSRGSVLFCSGPGRAGRAAEPLHPVCTCGRHFR-RPDPCREPLASPIQDSVA 91


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,673,660
Number of Sequences: 237096
Number of extensions: 2090475
Number of successful extensions: 2947
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2947
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)