Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17l22
         (438 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130277-1|AAI30278.1| 1444|Homo sapiens phosphoinositide-3-kina...    29   7.0  
BC114476-1|AAI14477.1|  785|Homo sapiens ANKRD28 protein protein.      29   7.0  
BC113868-1|AAI13869.1|  782|Homo sapiens ANKRD28 protein protein.      29   7.0  
BC106948-1|AAI06949.2|  785|Homo sapiens ANKRD28 protein protein.      29   7.0  
AY367056-1|AAQ72374.1|  520|Homo sapiens KIAA0379-like protein p...    29   7.0  
AK126888-1|BAC86737.1|  687|Homo sapiens protein ( Homo sapiens ...    29   7.0  
AJ000008-1|CAA03853.1| 1448|Homo sapiens PI3-kinase protein.           29   7.0  
AB002377-1|BAA20833.2| 1059|Homo sapiens KIAA0379 protein protein.     29   7.0  

>BC130277-1|AAI30278.1| 1444|Homo sapiens phosphoinositide-3-kinase,
           class 2, gamma polypeptide protein.
          Length = 1444

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +1

Query: 76  KKIREGLHRN*QTQDTSMRVQTIAVSFPRTTFSKTQF-IHLLLTTTNRQYKF 228
           KKIRE  H        S ++ +   +FP   FSKT+F IH+ +  + +   F
Sbjct: 252 KKIRERYHAA-DVNFNSGKIWSTTTAFPYQLFSKTKFNIHIFIDNSTQPLHF 302


>BC114476-1|AAI14477.1|  785|Homo sapiens ANKRD28 protein protein.
          Length = 785

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 225 VLIHYRMSITIANYIFRRTKIXTCTSGPRPQCVRAL 332
           VLI+   SI + +YI +RT I    +    +C+R L
Sbjct: 634 VLINQGASILVKDYILKRTPIHAAATNGHSECLRLL 669


>BC113868-1|AAI13869.1|  782|Homo sapiens ANKRD28 protein protein.
          Length = 782

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 225 VLIHYRMSITIANYIFRRTKIXTCTSGPRPQCVRAL 332
           VLI+   SI + +YI +RT I    +    +C+R L
Sbjct: 631 VLINQGASILVKDYILKRTPIHAAATNGHSECLRLL 666


>BC106948-1|AAI06949.2|  785|Homo sapiens ANKRD28 protein protein.
          Length = 785

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 225 VLIHYRMSITIANYIFRRTKIXTCTSGPRPQCVRAL 332
           VLI+   SI + +YI +RT I    +    +C+R L
Sbjct: 634 VLINQGASILVKDYILKRTPIHAAATNGHSECLRLL 669


>AY367056-1|AAQ72374.1|  520|Homo sapiens KIAA0379-like protein
           protein.
          Length = 520

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 225 VLIHYRMSITIANYIFRRTKIXTCTSGPRPQCVRAL 332
           VLI+   SI + +YI +RT I    +    +C+R L
Sbjct: 68  VLINQGASILVKDYILKRTPIHAAATNGHSECLRLL 103


>AK126888-1|BAC86737.1|  687|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44940 fis, clone BRAMY4000915, weakly  similar
           to Ankyrin 1. ).
          Length = 687

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 225 VLIHYRMSITIANYIFRRTKIXTCTSGPRPQCVRAL 332
           VLI+   SI + +YI +RT I    +    +C+R L
Sbjct: 634 VLINQGASILVKDYILKRTPIHAAATNGHSECLRLL 669


>AJ000008-1|CAA03853.1| 1448|Homo sapiens PI3-kinase protein.
          Length = 1448

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +1

Query: 76  KKIREGLHRN*QTQDTSMRVQTIAVSFPRTTFSKTQF-IHLLLTTTNRQYKF 228
           KKIRE  H        S ++ +   +FP   FSKT+F IH+ +  + +   F
Sbjct: 253 KKIRERYHAA-DVNFNSGKIWSTTTAFPYQLFSKTKFNIHIFIDNSTQPLHF 303


>AB002377-1|BAA20833.2| 1059|Homo sapiens KIAA0379 protein protein.
          Length = 1059

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 225 VLIHYRMSITIANYIFRRTKIXTCTSGPRPQCVRAL 332
           VLI+   SI + +YI +RT I    +    +C+R L
Sbjct: 607 VLINQGASILVKDYILKRTPIHAAATNGHSECLRLL 642


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,432,621
Number of Sequences: 237096
Number of extensions: 994892
Number of successful extensions: 1954
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1954
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)