Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17l22
         (438 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070653-1|AAL48124.1| 1004|Drosophila melanogaster RH03791p pro...    27   8.4  
AE014134-222|AAF51400.1| 1004|Drosophila melanogaster CG4887-PA ...    27   8.4  

>AY070653-1|AAL48124.1| 1004|Drosophila melanogaster RH03791p protein.
          Length = 1004

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 268  FSEELKLXRARQVRARSACARYAPSHSQLGYGFLEKLG 381
            F +E+K  ++RQ ++ SA      S S +G   L+K+G
Sbjct: 910  FEQEIKTLQSRQKQSTSATPAMPISSSNVGSRLLQKMG 947


>AE014134-222|AAF51400.1| 1004|Drosophila melanogaster CG4887-PA
            protein.
          Length = 1004

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 268  FSEELKLXRARQVRARSACARYAPSHSQLGYGFLEKLG 381
            F +E+K  ++RQ ++ SA      S S +G   L+K+G
Sbjct: 910  FEQEIKTLQSRQKQSTSATPAMPISSSNVGSRLLQKMG 947


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,343,999
Number of Sequences: 53049
Number of extensions: 325350
Number of successful extensions: 729
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)