Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17l20
(862 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013064-1|AAH13064.1| 285|Homo sapiens UTP15 protein protein. 93 1e-18
AK022849-1|BAB14271.1| 285|Homo sapiens protein ( Homo sapiens ... 93 1e-18
CR457295-1|CAG33576.1| 285|Homo sapiens FLJ12787 protein. 91 5e-18
AK074217-1|BAB85020.1| 506|Homo sapiens protein ( Homo sapiens ... 87 8e-17
BC112391-1|AAI12392.1| 957|Homo sapiens ELKS/RAB6-interacting/C... 32 2.3
BC111550-1|AAI11551.1| 957|Homo sapiens ERC2 protein protein. 32 2.3
AB002376-1|BAA20832.2| 970|Homo sapiens KIAA0378 protein. 32 2.3
BC150248-1|AAI50249.1| 992|Homo sapiens ELKS/RAB6-interacting/C... 31 4.1
BC068006-1|AAH68006.1| 627|Homo sapiens ERC1 protein protein. 31 4.1
AB053470-1|BAC54109.1| 1088|Homo sapiens ELKS delta protein. 31 4.1
AB053468-1|BAC54107.1| 992|Homo sapiens ELKS beta protein. 31 4.1
AB029004-1|BAA83033.2| 1003|Homo sapiens KIAA1081 protein protein. 31 4.1
AB015617-1|BAA88763.1| 948|Homo sapiens ELKS protein. 31 4.1
BT006912-1|AAP35558.1| 546|Homo sapiens achalasia, adrenocortic... 31 5.4
BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence si... 31 5.4
BC000659-1|AAH00659.1| 546|Homo sapiens achalasia, adrenocortic... 31 5.4
AY237818-1|AAP69911.1| 513|Homo sapiens achalasia variant protein. 31 5.4
AK222509-1|BAD96229.1| 546|Homo sapiens achalasia, adrenocortic... 31 5.4
AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens ... 31 5.4
AK000833-1|BAA91394.1| 546|Homo sapiens protein ( Homo sapiens ... 31 5.4
AJ297977-1|CAC17465.1| 546|Homo sapiens AAAS protein protein. 31 5.4
AJ289857-1|CAC19017.1| 546|Homo sapiens adracalin protein. 31 5.4
AJ289841-1|CAC19038.1| 546|Homo sapiens adracalin protein. 31 5.4
AF226048-1|AAF86948.1| 546|Homo sapiens GL003 protein. 31 5.4
AM295155-1|CAL26601.1| 488|Homo sapiens chaperonin subunit 6A p... 30 9.4
>BC013064-1|AAH13064.1| 285|Homo sapiens UTP15 protein protein.
Length = 285
Score = 93.1 bits (221), Expect = 1e-18
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 4/207 (1%)
Frame = -2
Query: 705 AILSMAISEHDDILTVGMIDGIISIRKREEPVRQSE----KRKNLLKFIPDHTSQTKADT 538
+ILS+A++ D+ + VGM +GI+S++ R+ ++ +R FI + D
Sbjct: 58 SILSLALAHEDETIVVGMTNGILSVKHRKSEAKKESLPRRRRPAYRTFIKGKNYMKQRDD 117
Query: 537 VEVANEVKINKKQKLPDCDVLIRKMQFSKALTVVLRPYISVKYPEKTTAVIQELLRREVL 358
+ + K K +L D D ++ + SKAL VL P ++K PE T ++I+EL RR VL
Sbjct: 118 ILINRPAK--KHLELYDRD--LKHFRISKALDRVLDPTCTIKTPEITVSIIKELNRRGVL 173
Query: 357 RVAIENLEEKFIGLLLKFLISKLGETRFTRTIVDATNVFIDIFEGKINMFSPENLYLYKC 178
A+ +EK I +L FLI L + RF +++A + IDI+ I SP +
Sbjct: 174 ANALAGRDEKEISHVLNFLIRNLSQPRFAPVLINAAEIIIDIYLPVIGQ-SPVVDKKFLL 232
Query: 177 LFKRVESEIKVCKSIAELEGAINLIMA 97
L VE EI + + E G ++++ A
Sbjct: 233 LQGLVEKEIDYQRELLETLGMMDMLFA 259
Score = 50.8 bits (116), Expect = 6e-06
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = -1
Query: 844 RNXTKPVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDF 713
+N K VT L L+S+ RL+S SLDR VK+Y +++KVVH+ D+
Sbjct: 12 KNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDY 55
>AK022849-1|BAB14271.1| 285|Homo sapiens protein ( Homo sapiens
cDNA FLJ12787 fis, clone NT2RP2001943. ).
Length = 285
Score = 93.1 bits (221), Expect = 1e-18
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 4/207 (1%)
Frame = -2
Query: 705 AILSMAISEHDDILTVGMIDGIISIRKREEPVRQSE----KRKNLLKFIPDHTSQTKADT 538
+ILS+A++ D+ + VGM +GI+S++ R+ ++ +R FI + D
Sbjct: 58 SILSLALAHEDETIVVGMTNGILSVKHRKSEAKKESLPRRRRPAYRTFIKGKNYMKQRDD 117
Query: 537 VEVANEVKINKKQKLPDCDVLIRKMQFSKALTVVLRPYISVKYPEKTTAVIQELLRREVL 358
+ + K K +L D D ++ + SKAL VL P ++K PE T ++I+EL RR VL
Sbjct: 118 ILINRPAK--KHLELYDRD--LKHFRISKALDRVLGPTCTIKTPEITVSIIKELNRRGVL 173
Query: 357 RVAIENLEEKFIGLLLKFLISKLGETRFTRTIVDATNVFIDIFEGKINMFSPENLYLYKC 178
A+ +EK I +L FLI L + RF +++A + IDI+ I SP +
Sbjct: 174 ANALAGRDEKEISHVLNFLIRNLSQPRFAPVLINAAEIIIDIYLPVIGQ-SPVVDKKFLL 232
Query: 177 LFKRVESEIKVCKSIAELEGAINLIMA 97
L VE EI + + E G ++++ A
Sbjct: 233 LQGLVEKEIDYQRELLETLGMMDMLFA 259
Score = 50.8 bits (116), Expect = 6e-06
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = -1
Query: 844 RNXTKPVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDF 713
+N K VT L L+S+ RL+S SLDR VK+Y +++KVVH+ D+
Sbjct: 12 KNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDY 55
>CR457295-1|CAG33576.1| 285|Homo sapiens FLJ12787 protein.
Length = 285
Score = 91.1 bits (216), Expect = 5e-18
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 4/207 (1%)
Frame = -2
Query: 705 AILSMAISEHDDILTVGMIDGIISIRKREEPVRQSE----KRKNLLKFIPDHTSQTKADT 538
+ILS+A++ D+ + VGM +GI S++ R+ ++ +R FI + D
Sbjct: 58 SILSLALAHEDETIVVGMTNGIPSVKHRKSEAKKESLPRRRRPAYRTFIKGKNYMKQRDD 117
Query: 537 VEVANEVKINKKQKLPDCDVLIRKMQFSKALTVVLRPYISVKYPEKTTAVIQELLRREVL 358
+ + K K +L D D ++ + SKAL VL P ++K PE T ++I+EL RR VL
Sbjct: 118 ILINRPAK--KHLELYDRD--LKHFRISKALDRVLDPTCTIKTPEITVSIIKELNRRGVL 173
Query: 357 RVAIENLEEKFIGLLLKFLISKLGETRFTRTIVDATNVFIDIFEGKINMFSPENLYLYKC 178
A+ +EK I +L FLI L + RF +++A + IDI+ I SP +
Sbjct: 174 ANALAGRDEKEISHVLNFLIRNLSQPRFAPVLINAAEIIIDIYLPVIGQ-SPVVDKKFLL 232
Query: 177 LFKRVESEIKVCKSIAELEGAINLIMA 97
L VE EI + + E G ++++ A
Sbjct: 233 LQGLVEKEIDYQRELLETLGMMDMLFA 259
Score = 50.8 bits (116), Expect = 6e-06
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = -1
Query: 844 RNXTKPVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDF 713
+N K VT L L+S+ RL+S SLDR VK+Y +++KVVH+ D+
Sbjct: 12 KNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDY 55
>AK074217-1|BAB85020.1| 506|Homo sapiens protein ( Homo sapiens
cDNA FLJ23637 fis, clone CAS09287. ).
Length = 506
Score = 87.0 bits (206), Expect = 8e-17
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 4/203 (1%)
Frame = -2
Query: 705 AILSMAISEHDDILTVGMIDGIISIRKREEPVRQSE----KRKNLLKFIPDHTSQTKADT 538
+ILS+A++ D+ + VGM +GI+S++ R+ ++ +R FI + D
Sbjct: 291 SILSLALAHEDETIVVGMTNGILSVKHRKSEAKKESLPRRRRPAYRTFIKGKNYMKQRDD 350
Query: 537 VEVANEVKINKKQKLPDCDVLIRKMQFSKALTVVLRPYISVKYPEKTTAVIQELLRREVL 358
+ + K K +L D D ++ + SKAL VL P ++K PE T ++I+ L RR VL
Sbjct: 351 ILINRPAK--KHLELYDRD--LKHFRISKALDRVLDPTCTIKTPEITVSIIKGLNRRGVL 406
Query: 357 RVAIENLEEKFIGLLLKFLISKLGETRFTRTIVDATNVFIDIFEGKINMFSPENLYLYKC 178
A+ +EK I +L FLI L + RF +++A + IDI+ I SP +
Sbjct: 407 ANALAGRDEKEISHVLNFLIRNLSQPRFAPVLINAAEIIIDIYLPVIGQ-SPVVDKKFLL 465
Query: 177 LFKRVESEIKVCKSIAELEGAIN 109
L VE EI + + E G ++
Sbjct: 466 LQGLVEKEIDYQRELLETLGMMD 488
Score = 50.8 bits (116), Expect = 6e-06
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = -1
Query: 844 RNXTKPVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDF 713
+N K VT L L+S+ RL+S SLDR VK+Y +++KVVH+ D+
Sbjct: 245 KNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDY 288
>BC112391-1|AAI12392.1| 957|Homo sapiens ELKS/RAB6-interacting/CAST
family member 2 protein.
Length = 957
Score = 32.3 bits (70), Expect = 2.3
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 2/173 (1%)
Frame = -2
Query: 705 AILSMAISEHDDILTVGMIDGIISIRKREEPVRQSEKRKNLLKFIPDHTSQTKADTVEVA 526
A L I + +D + + +G+++ REE ++Q E K+ KF+ Q K + +
Sbjct: 388 ASLERNIRDLEDEIQMLKANGVLNTEDREEEIKQIEVYKSHSKFMKTKIDQLKQELSKKE 447
Query: 525 NEVKINKKQKLPDCDVLIRKMQFSKALTVVLRPYISVKYPEKTTAVIQELLRREVLRVAI 346
+E+ + + KL + L + K VL+ ++ K E+ A++Q + + LR+ +
Sbjct: 448 SEL-LALQTKL---ETLSNQNSDCKQHIEVLKESLTAK--EQRAAILQTEV--DALRLRL 499
Query: 345 ENLEEKFIGLLLKFLISKLGETRFTRTIVDATNVFIDIFEGKINMFSP--ENL 193
E +E F+ K L E + +++ E KIN+ ENL
Sbjct: 500 EE-KESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENL 551
>BC111550-1|AAI11551.1| 957|Homo sapiens ERC2 protein protein.
Length = 957
Score = 32.3 bits (70), Expect = 2.3
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 2/173 (1%)
Frame = -2
Query: 705 AILSMAISEHDDILTVGMIDGIISIRKREEPVRQSEKRKNLLKFIPDHTSQTKADTVEVA 526
A L I + +D + + +G+++ REE ++Q E K+ KF+ Q K + +
Sbjct: 388 ASLERNIRDLEDEIQMLKANGVLNTEDREEEIKQIEVYKSHSKFMKTKIDQLKQELSKKE 447
Query: 525 NEVKINKKQKLPDCDVLIRKMQFSKALTVVLRPYISVKYPEKTTAVIQELLRREVLRVAI 346
+E+ + + KL + L + K VL+ ++ K E+ A++Q + + LR+ +
Sbjct: 448 SEL-LALQTKL---ETLSNQNSDCKQHIEVLKESLTAK--EQRAAILQTEV--DALRLRL 499
Query: 345 ENLEEKFIGLLLKFLISKLGETRFTRTIVDATNVFIDIFEGKINMFSP--ENL 193
E +E F+ K L E + +++ E KIN+ ENL
Sbjct: 500 EE-KESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENL 551
>AB002376-1|BAA20832.2| 970|Homo sapiens KIAA0378 protein.
Length = 970
Score = 32.3 bits (70), Expect = 2.3
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 2/173 (1%)
Frame = -2
Query: 705 AILSMAISEHDDILTVGMIDGIISIRKREEPVRQSEKRKNLLKFIPDHTSQTKADTVEVA 526
A L I + +D + + +G+++ REE ++Q E K+ KF+ Q K + +
Sbjct: 401 ASLERNIRDLEDEIQMLKANGVLNTEDREEEIKQIEVYKSHSKFMKTKIDQLKQELSKKE 460
Query: 525 NEVKINKKQKLPDCDVLIRKMQFSKALTVVLRPYISVKYPEKTTAVIQELLRREVLRVAI 346
+E+ + + KL + L + K VL+ ++ K E+ A++Q + + LR+ +
Sbjct: 461 SEL-LALQTKL---ETLSNQNSDCKQHIEVLKESLTAK--EQRAAILQTEV--DALRLRL 512
Query: 345 ENLEEKFIGLLLKFLISKLGETRFTRTIVDATNVFIDIFEGKINMFSP--ENL 193
E +E F+ K L E + +++ E KIN+ ENL
Sbjct: 513 EE-KESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENL 564
>BC150248-1|AAI50249.1| 992|Homo sapiens ELKS/RAB6-interacting/CAST
family member 1 protein.
Length = 992
Score = 31.5 bits (68), Expect = 4.1
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Frame = -2
Query: 648 DGIISIRKREEPVRQSEKRKNLLKFIPDHTSQTKADTVEVANEVKINKKQKLPDCDVLIR 469
+G +S +REE ++Q E ++ KF+ + Q K + E+ + + KL + L
Sbjct: 411 NGALSTEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTEL-LALQTKL---ETLTN 466
Query: 468 KMQFSKALTVVLRPYISVKYPEKTTAVIQELLRREVLRVAIENLEEKFIGLLLKFLISKL 289
+ SK VL+ ++ K E+ A++Q + + LR+ +E +E + K I +
Sbjct: 467 QFSDSKQHIEVLKESLTAK--EQRAAILQTEV--DALRLRLEE-KETMLNKKTK-QIQDM 520
Query: 288 GETRFTRT--IVDATNVFIDIFEGKINMFSP--ENL 193
E + T+ I D ++ +D+ E K+N+ ENL
Sbjct: 521 AEEKGTQAGEIHDLKDM-LDVKERKVNVLQKKIENL 555
>BC068006-1|AAH68006.1| 627|Homo sapiens ERC1 protein protein.
Length = 627
Score = 31.5 bits (68), Expect = 4.1
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Frame = -2
Query: 648 DGIISIRKREEPVRQSEKRKNLLKFIPDHTSQTKADTVEVANEVKINKKQKLPDCDVLIR 469
+G +S +REE ++Q E ++ KF+ + Q K + E+ + + KL + L
Sbjct: 411 NGALSTEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTEL-LALQTKL---ETLTN 466
Query: 468 KMQFSKALTVVLRPYISVKYPEKTTAVIQELLRREVLRVAIENLEEKFIGLLLKFLISKL 289
+ SK VL+ ++ K E+ A++Q + + LR+ +E +E + K I +
Sbjct: 467 QFSDSKQHIEVLKESLTAK--EQRAAILQTEV--DALRLRLEE-KETMLNKKTK-QIQDM 520
Query: 288 GETRFTRT--IVDATNVFIDIFEGKINMFSP--ENL 193
E + T+ I D ++ +D+ E K+N+ ENL
Sbjct: 521 AEEKGTQAGEIHDLKDM-LDVKERKVNVLQKKIENL 555
>AB053470-1|BAC54109.1| 1088|Homo sapiens ELKS delta protein.
Length = 1088
Score = 31.5 bits (68), Expect = 4.1
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Frame = -2
Query: 648 DGIISIRKREEPVRQSEKRKNLLKFIPDHTSQTKADTVEVANEVKINKKQKLPDCDVLIR 469
+G +S +REE ++Q E ++ KF+ + Q K + E+ + + KL + L
Sbjct: 411 NGALSTEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTEL-LALQTKL---ETLTN 466
Query: 468 KMQFSKALTVVLRPYISVKYPEKTTAVIQELLRREVLRVAIENLEEKFIGLLLKFLISKL 289
+ SK VL+ ++ K E+ A++Q + + LR+ +E +E + K I +
Sbjct: 467 QFSDSKQHIEVLKESLTAK--EQRAAILQTEV--DALRLRLEE-KETMLNKKTK-QIQDM 520
Query: 288 GETRFTRT--IVDATNVFIDIFEGKINMFSP--ENL 193
E + T+ I D ++ +D+ E K+N+ ENL
Sbjct: 521 AEEKGTQAGEIHDLKDM-LDVKERKVNVLQKKIENL 555
>AB053468-1|BAC54107.1| 992|Homo sapiens ELKS beta protein.
Length = 992
Score = 31.5 bits (68), Expect = 4.1
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Frame = -2
Query: 648 DGIISIRKREEPVRQSEKRKNLLKFIPDHTSQTKADTVEVANEVKINKKQKLPDCDVLIR 469
+G +S +REE ++Q E ++ KF+ + Q K + E+ + + KL + L
Sbjct: 411 NGALSTEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTEL-LALQTKL---ETLTN 466
Query: 468 KMQFSKALTVVLRPYISVKYPEKTTAVIQELLRREVLRVAIENLEEKFIGLLLKFLISKL 289
+ SK VL+ ++ K E+ A++Q + + LR+ +E +E + K I +
Sbjct: 467 QFSDSKQHIEVLKESLTAK--EQRAAILQTEV--DALRLRLEE-KETMLNKKTK-QIQDM 520
Query: 288 GETRFTRT--IVDATNVFIDIFEGKINMFSP--ENL 193
E + T+ I D ++ +D+ E K+N+ ENL
Sbjct: 521 AEEKGTQAGEIHDLKDM-LDVKERKVNVLQKKIENL 555
>AB029004-1|BAA83033.2| 1003|Homo sapiens KIAA1081 protein protein.
Length = 1003
Score = 31.5 bits (68), Expect = 4.1
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Frame = -2
Query: 648 DGIISIRKREEPVRQSEKRKNLLKFIPDHTSQTKADTVEVANEVKINKKQKLPDCDVLIR 469
+G +S +REE ++Q E ++ KF+ + Q K + E+ + + KL + L
Sbjct: 422 NGALSTEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTEL-LALQTKL---ETLTN 477
Query: 468 KMQFSKALTVVLRPYISVKYPEKTTAVIQELLRREVLRVAIENLEEKFIGLLLKFLISKL 289
+ SK VL+ ++ K E+ A++Q + + LR+ +E +E + K I +
Sbjct: 478 QFSDSKQHIEVLKESLTAK--EQRAAILQTEV--DALRLRLEE-KETMLNKKTK-QIQDM 531
Query: 288 GETRFTRT--IVDATNVFIDIFEGKINMFSP--ENL 193
E + T+ I D ++ +D+ E K+N+ ENL
Sbjct: 532 AEEKGTQAGEIHDLKDM-LDVKERKVNVLQKKIENL 566
>AB015617-1|BAA88763.1| 948|Homo sapiens ELKS protein.
Length = 948
Score = 31.5 bits (68), Expect = 4.1
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Frame = -2
Query: 648 DGIISIRKREEPVRQSEKRKNLLKFIPDHTSQTKADTVEVANEVKINKKQKLPDCDVLIR 469
+G +S +REE ++Q E ++ KF+ + Q K + E+ + + KL + L
Sbjct: 411 NGALSTEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTEL-LALQTKL---ETLTN 466
Query: 468 KMQFSKALTVVLRPYISVKYPEKTTAVIQELLRREVLRVAIENLEEKFIGLLLKFLISKL 289
+ SK VL+ ++ K E+ A++Q + + LR+ +E +E + K I +
Sbjct: 467 QFSDSKQHIEVLKESLTAK--EQRAAILQTEV--DALRLRLEE-KETMLNKKTK-QIQDM 520
Query: 288 GETRFTRT--IVDATNVFIDIFEGKINMFSP--ENL 193
E + T+ I D ++ +D+ E K+N+ ENL
Sbjct: 521 AEEKGTQAGEIHDLKDM-LDVKERKVNVLQKKIENL 555
>BT006912-1|AAP35558.1| 546|Homo sapiens achalasia, adrenocortical
insufficiency, alacrimia (Allgrove, triple-A) protein.
Length = 546
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -1
Query: 829 PVTTLRLASNNSRLMSAS-LDRHVKIYDVST 740
PVT+L A + RL+SAS +D ++++DVST
Sbjct: 246 PVTSLAWAPSGGRLLSASPVDAAIRVWDVST 276
>BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence
similarity 98, member A protein.
Length = 518
Score = 31.1 bits (67), Expect = 5.4
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Frame = -2
Query: 570 PDHTSQTKADTVEVANEVKINKKQKLPDCDVLIRKMQFS-------KALTVVLRPYISVK 412
P H + +A +ANE ++ +K + DV ++ +S + L V +P SV
Sbjct: 198 PAHWEKIEAINQAIANEYEVRRKLLIKRLDVTVQSFGWSDRAKSQTEKLAKVYQPKRSVL 257
Query: 411 YPEKTTAVIQELLRRE----VLRVAIENLEEKFIGLLLKFLISKL 289
P+ T +V L R+ +LR + ++ EK + K L+ ++
Sbjct: 258 SPKTTISVAHLLAARQDLSKILRTSSGSIREKTACAINKVLMGRV 302
>BC000659-1|AAH00659.1| 546|Homo sapiens achalasia, adrenocortical
insufficiency, alacrimia (Allgrove, triple-A) protein.
Length = 546
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -1
Query: 829 PVTTLRLASNNSRLMSAS-LDRHVKIYDVST 740
PVT+L A + RL+SAS +D ++++DVST
Sbjct: 246 PVTSLAWAPSGGRLLSASPVDAAIRVWDVST 276
>AY237818-1|AAP69911.1| 513|Homo sapiens achalasia variant protein.
Length = 513
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -1
Query: 829 PVTTLRLASNNSRLMSAS-LDRHVKIYDVST 740
PVT+L A + RL+SAS +D ++++DVST
Sbjct: 213 PVTSLAWAPSGGRLLSASPVDAAIRVWDVST 243
>AK222509-1|BAD96229.1| 546|Homo sapiens achalasia, adrenocortical
insufficiency, alacrimia (Allgrove, triple-A) variant
protein.
Length = 546
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -1
Query: 829 PVTTLRLASNNSRLMSAS-LDRHVKIYDVST 740
PVT+L A + RL+SAS +D ++++DVST
Sbjct: 246 PVTSLAWAPSGGRLLSASPVDAAIRVWDVST 276
>AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ90386 fis, clone NT2RP2005378, weakly similar to
GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8 PRECURSOR.
).
Length = 519
Score = 31.1 bits (67), Expect = 5.4
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Frame = -2
Query: 570 PDHTSQTKADTVEVANEVKINKKQKLPDCDVLIRKMQFS-------KALTVVLRPYISVK 412
P H + +A +ANE ++ +K + DV ++ +S + L V +P SV
Sbjct: 199 PAHWEKIEAINQAIANEYEVRRKLLIKRLDVTVQSFGWSDRAKSQTEKLAKVYQPKRSVL 258
Query: 411 YPEKTTAVIQELLRRE----VLRVAIENLEEKFIGLLLKFLISKL 289
P+ T +V L R+ +LR + ++ EK + K L+ ++
Sbjct: 259 SPKTTISVAHLLAARQDLSKILRTSSGSIREKTACAINKVLMGRV 303
>AK000833-1|BAA91394.1| 546|Homo sapiens protein ( Homo sapiens
cDNA FLJ20826 fis, clone ADSE00129. ).
Length = 546
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -1
Query: 829 PVTTLRLASNNSRLMSAS-LDRHVKIYDVST 740
PVT+L A + RL+SAS +D ++++DVST
Sbjct: 246 PVTSLAWAPSGGRLLSASPVDAAIRVWDVST 276
>AJ297977-1|CAC17465.1| 546|Homo sapiens AAAS protein protein.
Length = 546
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -1
Query: 829 PVTTLRLASNNSRLMSAS-LDRHVKIYDVST 740
PVT+L A + RL+SAS +D ++++DVST
Sbjct: 246 PVTSLAWAPSGGRLLSASPVDAAIRVWDVST 276
>AJ289857-1|CAC19017.1| 546|Homo sapiens adracalin protein.
Length = 546
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -1
Query: 829 PVTTLRLASNNSRLMSAS-LDRHVKIYDVST 740
PVT+L A + RL+SAS +D ++++DVST
Sbjct: 246 PVTSLAWAPSGGRLLSASPVDAAIRVWDVST 276
>AJ289841-1|CAC19038.1| 546|Homo sapiens adracalin protein.
Length = 546
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -1
Query: 829 PVTTLRLASNNSRLMSAS-LDRHVKIYDVST 740
PVT+L A + RL+SAS +D ++++DVST
Sbjct: 246 PVTSLAWAPSGGRLLSASPVDAAIRVWDVST 276
>AF226048-1|AAF86948.1| 546|Homo sapiens GL003 protein.
Length = 546
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -1
Query: 829 PVTTLRLASNNSRLMSAS-LDRHVKIYDVST 740
PVT+L A + RL+SAS +D ++++DVST
Sbjct: 246 PVTSLAWAPSGGRLLSASPVDAAIRVWDVST 276
>AM295155-1|CAL26601.1| 488|Homo sapiens chaperonin subunit 6A
protein.
Length = 488
Score = 30.3 bits (65), Expect = 9.4
Identities = 10/36 (27%), Positives = 25/36 (69%)
Frame = -2
Query: 717 ISPNAILSMAISEHDDILTVGMIDGIISIRKREEPV 610
++ ++ + +E D+LT ++D I++I+K++EP+
Sbjct: 108 VARTSLRTKVYAELADVLTEAVVDSILAIKKQDEPI 143
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,710,445
Number of Sequences: 237096
Number of extensions: 2136895
Number of successful extensions: 4961
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4950
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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