Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17l04
(155 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z21673-1|CAA79771.1| 130|Drosophila melanogaster ribosomal prot... 105 1e-23
AY084182-1|AAL89920.1| 130|Drosophila melanogaster RE54483p pro... 105 1e-23
AE014298-1889|AAN09323.1| 130|Drosophila melanogaster CG2033-PE... 105 1e-23
AE014298-1888|AAF48257.1| 130|Drosophila melanogaster CG2033-PD... 105 1e-23
AE014298-1887|AAN09322.1| 130|Drosophila melanogaster CG2033-PC... 105 1e-23
AE014298-1886|AAF48256.1| 130|Drosophila melanogaster CG2033-PA... 105 1e-23
AY150728-1|AAN78378.1| 130|Drosophila melanogaster CG12324 prot... 103 3e-23
AY150727-1|AAN78377.1| 130|Drosophila melanogaster CG12324 prot... 103 3e-23
AY150726-1|AAN78376.1| 130|Drosophila melanogaster CG12324 prot... 103 3e-23
AY150725-1|AAN78375.1| 130|Drosophila melanogaster CG12324 prot... 103 3e-23
AY150724-1|AAN78374.1| 130|Drosophila melanogaster CG12324 prot... 103 3e-23
AY150723-1|AAN78373.1| 130|Drosophila melanogaster CG12324 prot... 103 3e-23
AY150722-1|AAN78372.1| 130|Drosophila melanogaster CG12324 prot... 103 3e-23
AY150721-1|AAN78371.1| 130|Drosophila melanogaster CG12324 prot... 103 3e-23
AY150720-1|AAN78370.1| 130|Drosophila melanogaster CG12324 prot... 103 3e-23
AY150719-1|AAN78369.1| 130|Drosophila melanogaster CG12324 prot... 103 3e-23
AY150718-1|AAN78368.1| 130|Drosophila melanogaster CG12324 prot... 103 3e-23
AY150717-1|AAN78367.1| 130|Drosophila melanogaster CG12324 prot... 103 3e-23
AY150716-1|AAN78366.1| 130|Drosophila melanogaster CG12324 prot... 103 3e-23
AY150715-1|AAN78365.1| 130|Drosophila melanogaster CG12324 prot... 103 3e-23
AY150714-1|AAN78364.1| 130|Drosophila melanogaster CG12324 prot... 103 3e-23
AY150713-1|AAN78363.1| 130|Drosophila melanogaster CG12324 prot... 103 3e-23
AY061830-1|AAL27641.1| 130|Drosophila melanogaster LD11847p pro... 103 3e-23
AE013599-1180|AAM68752.1| 130|Drosophila melanogaster CG12324-P... 103 3e-23
AE013599-961|AAF58878.3| 779|Drosophila melanogaster CG1513-PA ... 28 1.5
BT009928-1|AAQ22397.1| 1089|Drosophila melanogaster SD10882p pro... 26 6.2
AE013599-3181|AAM70867.2| 1604|Drosophila melanogaster CG30387-P... 26 6.2
AE013599-3179|AAF46710.4| 1626|Drosophila melanogaster CG30387-P... 26 6.2
AE013599-3178|AAF46711.4| 1678|Drosophila melanogaster CG30387-P... 26 6.2
>Z21673-1|CAA79771.1| 130|Drosophila melanogaster ribosomal protein
15a (40S subunit)protein.
Length = 130
Score = 105 bits (251), Expect = 1e-23
Identities = 48/51 (94%), Positives = 50/51 (98%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFDVPINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDVPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY084182-1|AAL89920.1| 130|Drosophila melanogaster RE54483p
protein.
Length = 130
Score = 105 bits (251), Expect = 1e-23
Identities = 48/51 (94%), Positives = 50/51 (98%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFDVPINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDVPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AE014298-1889|AAN09323.1| 130|Drosophila melanogaster CG2033-PE,
isoform E protein.
Length = 130
Score = 105 bits (251), Expect = 1e-23
Identities = 48/51 (94%), Positives = 50/51 (98%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFDVPINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDVPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AE014298-1888|AAF48257.1| 130|Drosophila melanogaster CG2033-PD,
isoform D protein.
Length = 130
Score = 105 bits (251), Expect = 1e-23
Identities = 48/51 (94%), Positives = 50/51 (98%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFDVPINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDVPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AE014298-1887|AAN09322.1| 130|Drosophila melanogaster CG2033-PC,
isoform C protein.
Length = 130
Score = 105 bits (251), Expect = 1e-23
Identities = 48/51 (94%), Positives = 50/51 (98%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFDVPINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDVPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AE014298-1886|AAF48256.1| 130|Drosophila melanogaster CG2033-PA,
isoform A protein.
Length = 130
Score = 105 bits (251), Expect = 1e-23
Identities = 48/51 (94%), Positives = 50/51 (98%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFDVPINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDVPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY150728-1|AAN78378.1| 130|Drosophila melanogaster CG12324 protein
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY150727-1|AAN78377.1| 130|Drosophila melanogaster CG12324 protein
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY150726-1|AAN78376.1| 130|Drosophila melanogaster CG12324 protein
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY150725-1|AAN78375.1| 130|Drosophila melanogaster CG12324 protein
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY150724-1|AAN78374.1| 130|Drosophila melanogaster CG12324 protein
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY150723-1|AAN78373.1| 130|Drosophila melanogaster CG12324 protein
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY150722-1|AAN78372.1| 130|Drosophila melanogaster CG12324 protein
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY150721-1|AAN78371.1| 130|Drosophila melanogaster CG12324 protein
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY150720-1|AAN78370.1| 130|Drosophila melanogaster CG12324 protein
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY150719-1|AAN78369.1| 130|Drosophila melanogaster CG12324 protein
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY150718-1|AAN78368.1| 130|Drosophila melanogaster CG12324 protein
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY150717-1|AAN78367.1| 130|Drosophila melanogaster CG12324 protein
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY150716-1|AAN78366.1| 130|Drosophila melanogaster CG12324 protein
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY150715-1|AAN78365.1| 130|Drosophila melanogaster CG12324 protein
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY150714-1|AAN78364.1| 130|Drosophila melanogaster CG12324 protein
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY150713-1|AAN78363.1| 130|Drosophila melanogaster CG12324 protein
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AY061830-1|AAL27641.1| 130|Drosophila melanogaster LD11847p
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AE013599-1180|AAM68752.1| 130|Drosophila melanogaster CG12324-PA
protein.
Length = 130
Score = 103 bits (247), Expect = 3e-23
Identities = 47/51 (92%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = -2
Query: 154 PRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 5
PRFD PINDIE+WTN LLPSRQFGY+VLTTSGGIMDHEEARRKHLGGKILG
Sbjct: 77 PRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILG 127
>AE013599-961|AAF58878.3| 779|Drosophila melanogaster CG1513-PA
protein.
Length = 779
Score = 28.3 bits (60), Expect = 1.5
Identities = 9/37 (24%), Positives = 22/37 (59%)
Frame = -2
Query: 127 IERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGG 17
+ +WTN++ Q+ + VL + G++ + ++ K + G
Sbjct: 28 LSKWTNVMKGWQYRFFVLDENAGLLSYYTSKDKMIKG 64
>BT009928-1|AAQ22397.1| 1089|Drosophila melanogaster SD10882p
protein.
Length = 1089
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 145 DVPINDIERWTNLLPSRQFGYLVLTTSGGIMDH-EEARRKHLGG 17
DV D++ WT LL + + G+L + ++DH E + +GG
Sbjct: 64 DVQAEDLDNWTALLCASRNGHLDVVQL--LLDHGAEVEHRDMGG 105
>AE013599-3181|AAM70867.2| 1604|Drosophila melanogaster CG30387-PC,
isoform C protein.
Length = 1604
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 145 DVPINDIERWTNLLPSRQFGYLVLTTSGGIMDH-EEARRKHLGG 17
DV D++ WT LL + + G+L + ++DH E + +GG
Sbjct: 64 DVQAEDLDNWTALLCASRNGHLDVVQL--LLDHGAEVEHRDMGG 105
>AE013599-3179|AAF46710.4| 1626|Drosophila melanogaster CG30387-PA,
isoform A protein.
Length = 1626
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 145 DVPINDIERWTNLLPSRQFGYLVLTTSGGIMDH-EEARRKHLGG 17
DV D++ WT LL + + G+L + ++DH E + +GG
Sbjct: 86 DVQAEDLDNWTALLCASRNGHLDVVQL--LLDHGAEVEHRDMGG 127
>AE013599-3178|AAF46711.4| 1678|Drosophila melanogaster CG30387-PB,
isoform B protein.
Length = 1678
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 145 DVPINDIERWTNLLPSRQFGYLVLTTSGGIMDH-EEARRKHLGG 17
DV D++ WT LL + + G+L + ++DH E + +GG
Sbjct: 138 DVQAEDLDNWTALLCASRNGHLDVVQL--LLDHGAEVEHRDMGG 179
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,353,921
Number of Sequences: 53049
Number of extensions: 108231
Number of successful extensions: 363
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of database: 24,988,368
effective HSP length: 32
effective length of database: 23,290,800
effective search space used: 442525200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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