Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17k19
(854 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457186-1|CAG33467.1| 185|Homo sapiens Pfs2 protein. 120 5e-27
BC062444-1|AAH62444.1| 185|Homo sapiens GINS complex subunit 2 ... 120 5e-27
BC010164-1|AAH10164.1| 185|Homo sapiens GINS complex subunit 2 ... 120 5e-27
BC003186-1|AAH03186.1| 185|Homo sapiens GINS complex subunit 2 ... 120 5e-27
AK223123-1|BAD96843.1| 185|Homo sapiens DNA replication complex... 120 5e-27
AK001275-1|BAA91595.1| 185|Homo sapiens protein ( Homo sapiens ... 120 5e-27
AF201939-1|AAF86875.1| 185|Homo sapiens DC5 protein. 120 5e-27
AF151880-1|AAD34117.1| 185|Homo sapiens CGI-122 protein protein. 120 5e-27
DQ106402-1|AAZ99231.1| 334|Homo sapiens G-protein-coupled recep... 33 1.3
DQ106401-1|AAZ99230.1| 381|Homo sapiens G-protein-coupled recep... 33 1.3
DQ106400-1|AAZ99229.1| 349|Homo sapiens G-protein-coupled recep... 33 1.3
DQ106399-1|AAZ99228.1| 349|Homo sapiens G-protein-coupled recep... 33 1.3
DQ106398-1|AAZ99227.1| 381|Homo sapiens G-protein-coupled recep... 33 1.3
BC020678-1|AAH20678.1| 381|Homo sapiens G protein-coupled recep... 33 1.3
AL627402-7|CAH71242.1| 381|Homo sapiens G protein-coupled recep... 33 1.3
AK027780-1|BAB55362.1| 381|Homo sapiens protein ( Homo sapiens ... 33 1.3
AF118670-1|AAD17248.1| 381|Homo sapiens orphan G protein-couple... 33 1.3
AF039686-1|AAD50531.1| 381|Homo sapiens G-protein coupled recep... 33 1.3
Y14946-1|CAA75163.1| 957|Homo sapiens SPIN protein protein. 32 3.1
U77948-1|AAB48826.1| 957|Homo sapiens Bruton's tyrosine kinase-... 32 3.1
BC099907-1|AAH99907.1| 976|Homo sapiens general transcription f... 32 3.1
BC070484-1|AAH70484.1| 957|Homo sapiens general transcription f... 32 3.1
AF038969-1|AAC08315.1| 957|Homo sapiens general transcription f... 32 3.1
AF038968-1|AAC08314.1| 977|Homo sapiens general transcription f... 32 3.1
AF038967-1|AAC08313.1| 978|Homo sapiens general transcription f... 32 3.1
AF035737-1|AAC08312.1| 998|Homo sapiens general transcription f... 32 3.1
AF015553-1|AAB70791.1| 957|Homo sapiens TFII-I protein protein. 32 3.1
AC083884-4|AAS07464.1| 957|Homo sapiens unknown protein. 32 3.1
AC083884-3|AAS07462.1| 978|Homo sapiens unknown protein. 32 3.1
AC083884-2|AAS07463.1| 977|Homo sapiens unknown protein. 32 3.1
AC083884-1|AAS07461.1| 998|Homo sapiens unknown protein. 32 3.1
AC004883-1|AAL93085.1| 998|Homo sapiens general transcription f... 32 3.1
>CR457186-1|CAG33467.1| 185|Homo sapiens Pfs2 protein.
Length = 185
Score = 120 bits (290), Expect = 5e-27
Identities = 48/116 (41%), Positives = 84/116 (72%)
Frame = -2
Query: 523 QKCHVIPPDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKT 344
QKC ++PP+WMDVE LE +++ E++ FT MP+ +YM KL+L A++++P A EI+T
Sbjct: 56 QKCRLLPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRT 115
Query: 343 IIKDIWDIRMSKLRTSMDALMKTGGGYGRLDHLTMMEINSVKPLLPAAMDNLLRMQ 176
++KD+WD R++KLR S D+ ++ + +LD+LT+MEIN+ L A++++ +++
Sbjct: 116 LVKDMWDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171
>BC062444-1|AAH62444.1| 185|Homo sapiens GINS complex subunit 2
(Psf2 homolog) protein.
Length = 185
Score = 120 bits (290), Expect = 5e-27
Identities = 48/116 (41%), Positives = 84/116 (72%)
Frame = -2
Query: 523 QKCHVIPPDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKT 344
QKC ++PP+WMDVE LE +++ E++ FT MP+ +YM KL+L A++++P A EI+T
Sbjct: 56 QKCRLLPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRT 115
Query: 343 IIKDIWDIRMSKLRTSMDALMKTGGGYGRLDHLTMMEINSVKPLLPAAMDNLLRMQ 176
++KD+WD R++KLR S D+ ++ + +LD+LT+MEIN+ L A++++ +++
Sbjct: 116 LVKDMWDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171
>BC010164-1|AAH10164.1| 185|Homo sapiens GINS complex subunit 2
(Psf2 homolog) protein.
Length = 185
Score = 120 bits (290), Expect = 5e-27
Identities = 48/116 (41%), Positives = 84/116 (72%)
Frame = -2
Query: 523 QKCHVIPPDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKT 344
QKC ++PP+WMDVE LE +++ E++ FT MP+ +YM KL+L A++++P A EI+T
Sbjct: 56 QKCRLLPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRT 115
Query: 343 IIKDIWDIRMSKLRTSMDALMKTGGGYGRLDHLTMMEINSVKPLLPAAMDNLLRMQ 176
++KD+WD R++KLR S D+ ++ + +LD+LT+MEIN+ L A++++ +++
Sbjct: 116 LVKDMWDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171
>BC003186-1|AAH03186.1| 185|Homo sapiens GINS complex subunit 2
(Psf2 homolog) protein.
Length = 185
Score = 120 bits (290), Expect = 5e-27
Identities = 48/116 (41%), Positives = 84/116 (72%)
Frame = -2
Query: 523 QKCHVIPPDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKT 344
QKC ++PP+WMDVE LE +++ E++ FT MP+ +YM KL+L A++++P A EI+T
Sbjct: 56 QKCRLLPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRT 115
Query: 343 IIKDIWDIRMSKLRTSMDALMKTGGGYGRLDHLTMMEINSVKPLLPAAMDNLLRMQ 176
++KD+WD R++KLR S D+ ++ + +LD+LT+MEIN+ L A++++ +++
Sbjct: 116 LVKDMWDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171
>AK223123-1|BAD96843.1| 185|Homo sapiens DNA replication complex
GINS protein PSF2 variant protein.
Length = 185
Score = 120 bits (290), Expect = 5e-27
Identities = 48/116 (41%), Positives = 84/116 (72%)
Frame = -2
Query: 523 QKCHVIPPDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKT 344
QKC ++PP+WMDVE LE +++ E++ FT MP+ +YM KL+L A++++P A EI+T
Sbjct: 56 QKCRLLPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRT 115
Query: 343 IIKDIWDIRMSKLRTSMDALMKTGGGYGRLDHLTMMEINSVKPLLPAAMDNLLRMQ 176
++KD+WD R++KLR S D+ ++ + +LD+LT+MEIN+ L A++++ +++
Sbjct: 116 LVKDMWDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171
>AK001275-1|BAA91595.1| 185|Homo sapiens protein ( Homo sapiens
cDNA FLJ10413 fis, clone NT2RP1000063. ).
Length = 185
Score = 120 bits (290), Expect = 5e-27
Identities = 48/116 (41%), Positives = 84/116 (72%)
Frame = -2
Query: 523 QKCHVIPPDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKT 344
QKC ++PP+WMDVE LE +++ E++ FT MP+ +YM KL+L A++++P A EI+T
Sbjct: 56 QKCRLLPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRT 115
Query: 343 IIKDIWDIRMSKLRTSMDALMKTGGGYGRLDHLTMMEINSVKPLLPAAMDNLLRMQ 176
++KD+WD R++KLR S D+ ++ + +LD+LT+MEIN+ L A++++ +++
Sbjct: 116 LVKDMWDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171
>AF201939-1|AAF86875.1| 185|Homo sapiens DC5 protein.
Length = 185
Score = 120 bits (290), Expect = 5e-27
Identities = 48/116 (41%), Positives = 84/116 (72%)
Frame = -2
Query: 523 QKCHVIPPDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKT 344
QKC ++PP+WMDVE LE +++ E++ FT MP+ +YM KL+L A++++P A EI+T
Sbjct: 56 QKCRLLPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRT 115
Query: 343 IIKDIWDIRMSKLRTSMDALMKTGGGYGRLDHLTMMEINSVKPLLPAAMDNLLRMQ 176
++KD+WD R++KLR S D+ ++ + +LD+LT+MEIN+ L A++++ +++
Sbjct: 116 LVKDMWDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171
>AF151880-1|AAD34117.1| 185|Homo sapiens CGI-122 protein protein.
Length = 185
Score = 120 bits (290), Expect = 5e-27
Identities = 48/116 (41%), Positives = 84/116 (72%)
Frame = -2
Query: 523 QKCHVIPPDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKT 344
QKC ++PP+WMDVE LE +++ E++ FT MP+ +YM KL+L A++++P A EI+T
Sbjct: 56 QKCRLLPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRT 115
Query: 343 IIKDIWDIRMSKLRTSMDALMKTGGGYGRLDHLTMMEINSVKPLLPAAMDNLLRMQ 176
++KD+WD R++KLR S D+ ++ + +LD+LT+MEIN+ L A++++ +++
Sbjct: 116 LVKDMWDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171
>DQ106402-1|AAZ99231.1| 334|Homo sapiens G-protein-coupled receptor
34 splice variant protein.
Length = 334
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = -2
Query: 850 YLXKCKNVGK*NKAAGRHFSGSSKSPTKKSQ*MTTILLRL*FIPYHLISFHLISSQLINV 671
Y+ KN+ + +K + + + T ++ + I+ + F+PYH F ISSQL NV
Sbjct: 191 YIKIGKNLLRISKRRSKFPNSGKYATTARNSFIVLIIFTICFVPYHAFRFIYISSQL-NV 249
Query: 670 SN*LSSFHFIIFHKNKSI 617
S S + I HK I
Sbjct: 250 S---SCYWKEIVHKTNEI 264
>DQ106401-1|AAZ99230.1| 381|Homo sapiens G-protein-coupled receptor
34 protein.
Length = 381
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = -2
Query: 850 YLXKCKNVGK*NKAAGRHFSGSSKSPTKKSQ*MTTILLRL*FIPYHLISFHLISSQLINV 671
Y+ KN+ + +K + + + T ++ + I+ + F+PYH F ISSQL NV
Sbjct: 238 YIKIGKNLLRISKRRSKFPNSGKYATTARNSFIVLIIFTICFVPYHAFRFIYISSQL-NV 296
Query: 670 SN*LSSFHFIIFHKNKSI 617
S S + I HK I
Sbjct: 297 S---SCYWKEIVHKTNEI 311
>DQ106400-1|AAZ99229.1| 349|Homo sapiens G-protein-coupled receptor
34 splice variant protein.
Length = 349
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = -2
Query: 850 YLXKCKNVGK*NKAAGRHFSGSSKSPTKKSQ*MTTILLRL*FIPYHLISFHLISSQLINV 671
Y+ KN+ + +K + + + T ++ + I+ + F+PYH F ISSQL NV
Sbjct: 206 YIKIGKNLLRISKRRSKFPNSGKYATTARNSFIVLIIFTICFVPYHAFRFIYISSQL-NV 264
Query: 670 SN*LSSFHFIIFHKNKSI 617
S S + I HK I
Sbjct: 265 S---SCYWKEIVHKTNEI 279
>DQ106399-1|AAZ99228.1| 349|Homo sapiens G-protein-coupled receptor
34 splice variant protein.
Length = 349
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = -2
Query: 850 YLXKCKNVGK*NKAAGRHFSGSSKSPTKKSQ*MTTILLRL*FIPYHLISFHLISSQLINV 671
Y+ KN+ + +K + + + T ++ + I+ + F+PYH F ISSQL NV
Sbjct: 206 YIKIGKNLLRISKRRSKFPNSGKYATTARNSFIVLIIFTICFVPYHAFRFIYISSQL-NV 264
Query: 670 SN*LSSFHFIIFHKNKSI 617
S S + I HK I
Sbjct: 265 S---SCYWKEIVHKTNEI 279
>DQ106398-1|AAZ99227.1| 381|Homo sapiens G-protein-coupled receptor
34 protein.
Length = 381
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = -2
Query: 850 YLXKCKNVGK*NKAAGRHFSGSSKSPTKKSQ*MTTILLRL*FIPYHLISFHLISSQLINV 671
Y+ KN+ + +K + + + T ++ + I+ + F+PYH F ISSQL NV
Sbjct: 238 YIKIGKNLLRISKRRSKFPNSGKYATTARNSFIVLIIFTICFVPYHAFRFIYISSQL-NV 296
Query: 670 SN*LSSFHFIIFHKNKSI 617
S S + I HK I
Sbjct: 297 S---SCYWKEIVHKTNEI 311
>BC020678-1|AAH20678.1| 381|Homo sapiens G protein-coupled receptor
34 protein.
Length = 381
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = -2
Query: 850 YLXKCKNVGK*NKAAGRHFSGSSKSPTKKSQ*MTTILLRL*FIPYHLISFHLISSQLINV 671
Y+ KN+ + +K + + + T ++ + I+ + F+PYH F ISSQL NV
Sbjct: 238 YIKIGKNLLRISKRRSKFPNSGKYATTARNSFIVLIIFTICFVPYHAFRFIYISSQL-NV 296
Query: 670 SN*LSSFHFIIFHKNKSI 617
S S + I HK I
Sbjct: 297 S---SCYWKEIVHKTNEI 311
>AL627402-7|CAH71242.1| 381|Homo sapiens G protein-coupled receptor
34 protein.
Length = 381
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = -2
Query: 850 YLXKCKNVGK*NKAAGRHFSGSSKSPTKKSQ*MTTILLRL*FIPYHLISFHLISSQLINV 671
Y+ KN+ + +K + + + T ++ + I+ + F+PYH F ISSQL NV
Sbjct: 238 YIKIGKNLLRISKRRSKFPNSGKYATTARNSFIVLIIFTICFVPYHAFRFIYISSQL-NV 296
Query: 670 SN*LSSFHFIIFHKNKSI 617
S S + I HK I
Sbjct: 297 S---SCYWKEIVHKTNEI 311
>AK027780-1|BAB55362.1| 381|Homo sapiens protein ( Homo sapiens
cDNA FLJ14874 fis, clone PLACE1002722, weakly similar to
PROBABLE G PROTEIN-COUPLED RECEPTOR KIAA0001. ).
Length = 381
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = -2
Query: 850 YLXKCKNVGK*NKAAGRHFSGSSKSPTKKSQ*MTTILLRL*FIPYHLISFHLISSQLINV 671
Y+ KN+ + +K + + + T ++ + I+ + F+PYH F ISSQL NV
Sbjct: 238 YIKIGKNLLRISKRRSKFPNSGKYATTARNSFIVLIIFTICFVPYHAFRFIYISSQL-NV 296
Query: 670 SN*LSSFHFIIFHKNKSI 617
S S + I HK I
Sbjct: 297 S---SCYWKEIVHKTNEI 311
>AF118670-1|AAD17248.1| 381|Homo sapiens orphan G protein-coupled
receptor protein.
Length = 381
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = -2
Query: 850 YLXKCKNVGK*NKAAGRHFSGSSKSPTKKSQ*MTTILLRL*FIPYHLISFHLISSQLINV 671
Y+ KN+ + +K + + + T ++ + I+ + F+PYH F ISSQL NV
Sbjct: 238 YIKIGKNLLRISKRRSKFPNSGKYATTARNSFIVLIIFTICFVPYHAFRFIYISSQL-NV 296
Query: 670 SN*LSSFHFIIFHKNKSI 617
S S + I HK I
Sbjct: 297 S---SCYWKEIVHKTNEI 311
>AF039686-1|AAD50531.1| 381|Homo sapiens G-protein coupled receptor
GPR34 protein.
Length = 381
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = -2
Query: 850 YLXKCKNVGK*NKAAGRHFSGSSKSPTKKSQ*MTTILLRL*FIPYHLISFHLISSQLINV 671
Y+ KN+ + +K + + + T ++ + I+ + F+PYH F ISSQL NV
Sbjct: 238 YIKIGKNLLRISKRRSKFPNSGKYATTARNSFIVLIIFTICFVPYHAFRFIYISSQL-NV 296
Query: 670 SN*LSSFHFIIFHKNKSI 617
S S + I HK I
Sbjct: 297 S---SCYWKEIVHKTNEI 311
>Y14946-1|CAA75163.1| 957|Homo sapiens SPIN protein protein.
Length = 957
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -2
Query: 502 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 323
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 475 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 524
Query: 322 IRMSKLRTSMDAL 284
+R++KLR ++ +
Sbjct: 525 VRITKLRKQVEEI 537
>U77948-1|AAB48826.1| 957|Homo sapiens Bruton's tyrosine
kinase-associated protein-135 protein.
Length = 957
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -2
Query: 502 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 323
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 475 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 524
Query: 322 IRMSKLRTSMDAL 284
+R++KLR ++ +
Sbjct: 525 VRITKLRKQVEEI 537
>BC099907-1|AAH99907.1| 976|Homo sapiens general transcription
factor II, i protein.
Length = 976
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -2
Query: 502 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 323
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 494 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 543
Query: 322 IRMSKLRTSMDAL 284
+R++KLR ++ +
Sbjct: 544 VRITKLRKQVEEI 556
>BC070484-1|AAH70484.1| 957|Homo sapiens general transcription
factor II, i protein.
Length = 957
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -2
Query: 502 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 323
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 475 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 524
Query: 322 IRMSKLRTSMDAL 284
+R++KLR ++ +
Sbjct: 525 VRITKLRKQVEEI 537
>AF038969-1|AAC08315.1| 957|Homo sapiens general transcription
factor 2-I protein.
Length = 957
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -2
Query: 502 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 323
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 475 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 524
Query: 322 IRMSKLRTSMDAL 284
+R++KLR ++ +
Sbjct: 525 VRITKLRKQVEEI 537
>AF038968-1|AAC08314.1| 977|Homo sapiens general transcription
factor 2-I protein.
Length = 977
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -2
Query: 502 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 323
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 495 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 544
Query: 322 IRMSKLRTSMDAL 284
+R++KLR ++ +
Sbjct: 545 VRITKLRKQVEEI 557
>AF038967-1|AAC08313.1| 978|Homo sapiens general transcription
factor 2-I protein.
Length = 978
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -2
Query: 502 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 323
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 496 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 545
Query: 322 IRMSKLRTSMDAL 284
+R++KLR ++ +
Sbjct: 546 VRITKLRKQVEEI 558
>AF035737-1|AAC08312.1| 998|Homo sapiens general transcription
factor 2-I; alternative splice product protein.
Length = 998
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -2
Query: 502 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 323
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 516 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 565
Query: 322 IRMSKLRTSMDAL 284
+R++KLR ++ +
Sbjct: 566 VRITKLRKQVEEI 578
>AF015553-1|AAB70791.1| 957|Homo sapiens TFII-I protein protein.
Length = 957
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -2
Query: 502 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 323
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 475 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 524
Query: 322 IRMSKLRTSMDAL 284
+R++KLR ++ +
Sbjct: 525 VRITKLRKQVEEI 537
>AC083884-4|AAS07464.1| 957|Homo sapiens unknown protein.
Length = 957
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -2
Query: 502 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 323
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 475 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 524
Query: 322 IRMSKLRTSMDAL 284
+R++KLR ++ +
Sbjct: 525 VRITKLRKQVEEI 537
>AC083884-3|AAS07462.1| 978|Homo sapiens unknown protein.
Length = 978
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -2
Query: 502 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 323
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 496 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 545
Query: 322 IRMSKLRTSMDAL 284
+R++KLR ++ +
Sbjct: 546 VRITKLRKQVEEI 558
>AC083884-2|AAS07463.1| 977|Homo sapiens unknown protein.
Length = 977
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -2
Query: 502 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 323
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 495 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 544
Query: 322 IRMSKLRTSMDAL 284
+R++KLR ++ +
Sbjct: 545 VRITKLRKQVEEI 557
>AC083884-1|AAS07461.1| 998|Homo sapiens unknown protein.
Length = 998
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -2
Query: 502 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 323
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 516 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 565
Query: 322 IRMSKLRTSMDAL 284
+R++KLR ++ +
Sbjct: 566 VRITKLRKQVEEI 578
>AC004883-1|AAL93085.1| 998|Homo sapiens general transcription
factor 2I protein.
Length = 998
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -2
Query: 502 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 323
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 516 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 565
Query: 322 IRMSKLRTSMDAL 284
+R++KLR ++ +
Sbjct: 566 VRITKLRKQVEEI 578
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,292,076
Number of Sequences: 237096
Number of extensions: 2220815
Number of successful extensions: 8783
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 8605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8782
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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