Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17k18
(738 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-839|AAF52195.1| 222|Drosophila melanogaster CG33113-PA... 177 1e-44
AE014134-838|AAS64638.1| 224|Drosophila melanogaster CG33113-PG... 167 1e-41
AE014134-837|AAF52198.2| 224|Drosophila melanogaster CG33113-PD... 167 1e-41
AE014134-834|AAF52199.2| 595|Drosophila melanogaster CG33113-PF... 167 1e-41
BT011111-1|AAR82778.1| 458|Drosophila melanogaster LD43688p pro... 166 2e-41
AY069432-1|AAL39577.1| 234|Drosophila melanogaster LD14068p pro... 166 2e-41
AE014134-836|AAF52194.1| 234|Drosophila melanogaster CG33113-PE... 166 2e-41
AE014134-835|AAF52197.2| 234|Drosophila melanogaster CG33113-PB... 166 2e-41
AE014134-840|AAF52196.1| 202|Drosophila melanogaster CG33113-PC... 165 6e-41
U51048-1|AAB01147.1| 158|Drosophila melanogaster tropomyosin-li... 43 5e-04
AE014297-625|AAF54008.1| 154|Drosophila melanogaster CG1279-PA ... 43 5e-04
AE014296-2343|AAF49771.3| 2294|Drosophila melanogaster CG32133-P... 29 5.0
AF184227-1|AAD55738.1| 970|Drosophila melanogaster LD23194p pro... 29 8.7
AF017777-1|AAC28400.1| 836|Drosophila melanogaster tweety protein. 29 8.7
AE014298-3117|AAN09675.3| 836|Drosophila melanogaster CG1693-PB... 29 8.7
AE014298-3116|AAF50831.4| 970|Drosophila melanogaster CG1693-PA... 29 8.7
>AE014134-839|AAF52195.1| 222|Drosophila melanogaster CG33113-PA,
isoform A protein.
Length = 222
Score = 177 bits (432), Expect = 1e-44
Identities = 92/203 (45%), Positives = 120/203 (59%), Gaps = 5/203 (2%)
Frame = -1
Query: 681 LPPRGPVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRLYK 502
LP RGPVESLIYWR+ AFR+YK
Sbjct: 20 LPERGPVESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRIYK 79
Query: 501 NVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXLYELRRLFLVEDLVDS 322
+V QAVQKTN+GHPFK LE ++++S + ELRRLFLVED++DS
Sbjct: 80 SVTQAVQKTNEGHPFKDYLELDLTLSHEKVQNIAGVAVAHINGFISELRRLFLVEDIIDS 139
Query: 321 LKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITA 142
+KFGV+LW TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EIT
Sbjct: 140 IKFGVILWVFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITD 199
Query: 141 KVRAAVPLGRR-----AEGDKDK 88
K+R A+P+G + AE +KDK
Sbjct: 200 KIRVAIPIGNKKPEAAAESEKDK 222
>AE014134-838|AAS64638.1| 224|Drosophila melanogaster CG33113-PG,
isoform G protein.
Length = 224
Score = 167 bits (407), Expect = 1e-41
Identities = 90/205 (43%), Positives = 119/205 (58%), Gaps = 6/205 (2%)
Frame = -1
Query: 684 DLP-PRGPVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRL 508
DLP R +ESLIYWR+ AFR+
Sbjct: 20 DLPLNRESLESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRI 79
Query: 507 YKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXLYELRRLFLVEDLV 328
YK+V QAVQKTN+GHPFK LE ++++S + ELRRLFLVED++
Sbjct: 80 YKSVTQAVQKTNEGHPFKDYLELDLTLSHEKVQNIAGVAVAHINGFISELRRLFLVEDII 139
Query: 327 DSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEI 148
DS+KFGV+LW TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EI
Sbjct: 140 DSIKFGVILWVFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEI 199
Query: 147 TAKVRAAVPLGRR-----AEGDKDK 88
T K+R A+P+G + AE +KDK
Sbjct: 200 TDKIRVAIPIGNKKPEAAAESEKDK 224
>AE014134-837|AAF52198.2| 224|Drosophila melanogaster CG33113-PD,
isoform D protein.
Length = 224
Score = 167 bits (407), Expect = 1e-41
Identities = 90/205 (43%), Positives = 119/205 (58%), Gaps = 6/205 (2%)
Frame = -1
Query: 684 DLP-PRGPVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRL 508
DLP R +ESLIYWR+ AFR+
Sbjct: 20 DLPLNRESLESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRI 79
Query: 507 YKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXLYELRRLFLVEDLV 328
YK+V QAVQKTN+GHPFK LE ++++S + ELRRLFLVED++
Sbjct: 80 YKSVTQAVQKTNEGHPFKDYLELDLTLSHEKVQNIAGVAVAHINGFISELRRLFLVEDII 139
Query: 327 DSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEI 148
DS+KFGV+LW TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EI
Sbjct: 140 DSIKFGVILWVFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEI 199
Query: 147 TAKVRAAVPLGRR-----AEGDKDK 88
T K+R A+P+G + AE +KDK
Sbjct: 200 TDKIRVAIPIGNKKPEAAAESEKDK 224
>AE014134-834|AAF52199.2| 595|Drosophila melanogaster CG33113-PF,
isoform F protein.
Length = 595
Score = 167 bits (407), Expect = 1e-41
Identities = 88/199 (44%), Positives = 116/199 (58%), Gaps = 5/199 (2%)
Frame = -1
Query: 669 GPVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRLYKNVLQ 490
G VESLIYWR+ AFR+YK+V Q
Sbjct: 397 GLVESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRIYKSVTQ 456
Query: 489 AVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXLYELRRLFLVEDLVDSLKFG 310
AVQKTN+GHPFK LE ++++S + ELRRLFLVED++DS+KFG
Sbjct: 457 AVQKTNEGHPFKDYLELDLTLSHEKVQNIAGVAVAHINGFISELRRLFLVEDIIDSIKFG 516
Query: 309 VLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITAKVRA 130
V+LW TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EIT K+R
Sbjct: 517 VILWVFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRV 576
Query: 129 AVPLGRR-----AEGDKDK 88
A+P+G + AE +KDK
Sbjct: 577 AIPIGNKKPEAAAESEKDK 595
>BT011111-1|AAR82778.1| 458|Drosophila melanogaster LD43688p
protein.
Length = 458
Score = 166 bits (404), Expect = 2e-41
Identities = 87/197 (44%), Positives = 115/197 (58%), Gaps = 5/197 (2%)
Frame = -1
Query: 663 VESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRLYKNVLQAV 484
VESLIYWR+ AFR+YK+V QAV
Sbjct: 262 VESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRIYKSVTQAV 321
Query: 483 QKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXLYELRRLFLVEDLVDSLKFGVL 304
QKTN+GHPFK LE ++++S + ELRRLFLVED++DS+KFGV+
Sbjct: 322 QKTNEGHPFKDYLELDLTLSHEKVQNIAGVAVAHINGFISELRRLFLVEDIIDSIKFGVI 381
Query: 303 LWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAV 124
LW TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EIT K+R A+
Sbjct: 382 LWVFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAI 441
Query: 123 PLGRR-----AEGDKDK 88
P+G + AE +KDK
Sbjct: 442 PIGNKKPEAAAESEKDK 458
>AY069432-1|AAL39577.1| 234|Drosophila melanogaster LD14068p
protein.
Length = 234
Score = 166 bits (404), Expect = 2e-41
Identities = 87/197 (44%), Positives = 115/197 (58%), Gaps = 5/197 (2%)
Frame = -1
Query: 663 VESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRLYKNVLQAV 484
VESLIYWR+ AFR+YK+V QAV
Sbjct: 38 VESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRIYKSVTQAV 97
Query: 483 QKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXLYELRRLFLVEDLVDSLKFGVL 304
QKTN+GHPFK LE ++++S + ELRRLFLVED++DS+KFGV+
Sbjct: 98 QKTNEGHPFKDYLELDLTLSHEKVQNIAGVAVAHINGFISELRRLFLVEDIIDSIKFGVI 157
Query: 303 LWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAV 124
LW TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EIT K+R A+
Sbjct: 158 LWVFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAI 217
Query: 123 PLGRR-----AEGDKDK 88
P+G + AE +KDK
Sbjct: 218 PIGNKKPEAAAESEKDK 234
>AE014134-836|AAF52194.1| 234|Drosophila melanogaster CG33113-PE,
isoform E protein.
Length = 234
Score = 166 bits (404), Expect = 2e-41
Identities = 87/197 (44%), Positives = 115/197 (58%), Gaps = 5/197 (2%)
Frame = -1
Query: 663 VESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRLYKNVLQAV 484
VESLIYWR+ AFR+YK+V QAV
Sbjct: 38 VESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRIYKSVTQAV 97
Query: 483 QKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXLYELRRLFLVEDLVDSLKFGVL 304
QKTN+GHPFK LE ++++S + ELRRLFLVED++DS+KFGV+
Sbjct: 98 QKTNEGHPFKDYLELDLTLSHEKVQNIAGVAVAHINGFISELRRLFLVEDIIDSIKFGVI 157
Query: 303 LWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAV 124
LW TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EIT K+R A+
Sbjct: 158 LWVFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAI 217
Query: 123 PLGRR-----AEGDKDK 88
P+G + AE +KDK
Sbjct: 218 PIGNKKPEAAAESEKDK 234
>AE014134-835|AAF52197.2| 234|Drosophila melanogaster CG33113-PB,
isoform B protein.
Length = 234
Score = 166 bits (404), Expect = 2e-41
Identities = 87/197 (44%), Positives = 115/197 (58%), Gaps = 5/197 (2%)
Frame = -1
Query: 663 VESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRLYKNVLQAV 484
VESLIYWR+ AFR+YK+V QAV
Sbjct: 38 VESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRIYKSVTQAV 97
Query: 483 QKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXLYELRRLFLVEDLVDSLKFGVL 304
QKTN+GHPFK LE ++++S + ELRRLFLVED++DS+KFGV+
Sbjct: 98 QKTNEGHPFKDYLELDLTLSHEKVQNIAGVAVAHINGFISELRRLFLVEDIIDSIKFGVI 157
Query: 303 LWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAV 124
LW TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EIT K+R A+
Sbjct: 158 LWVFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAI 217
Query: 123 PLGRR-----AEGDKDK 88
P+G + AE +KDK
Sbjct: 218 PIGNKKPEAAAESEKDK 234
>AE014134-840|AAF52196.1| 202|Drosophila melanogaster CG33113-PC,
isoform C protein.
Length = 202
Score = 165 bits (401), Expect = 6e-41
Identities = 86/197 (43%), Positives = 115/197 (58%), Gaps = 5/197 (2%)
Frame = -1
Query: 663 VESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRLYKNVLQAV 484
+ESLIYWR+ AFR+YK+V QAV
Sbjct: 6 LESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRIYKSVTQAV 65
Query: 483 QKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXLYELRRLFLVEDLVDSLKFGVL 304
QKTN+GHPFK LE ++++S + ELRRLFLVED++DS+KFGV+
Sbjct: 66 QKTNEGHPFKDYLELDLTLSHEKVQNIAGVAVAHINGFISELRRLFLVEDIIDSIKFGVI 125
Query: 303 LWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAV 124
LW TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EIT K+R A+
Sbjct: 126 LWVFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAI 185
Query: 123 PLGRR-----AEGDKDK 88
P+G + AE +KDK
Sbjct: 186 PIGNKKPEAAAESEKDK 202
>U51048-1|AAB01147.1| 158|Drosophila melanogaster tropomyosin-like
protein protein.
Length = 158
Score = 42.7 bits (96), Expect = 5e-04
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = -1
Query: 351 LFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILG 244
L LVE DSLKF VLL + +G CFNG+TL+I G
Sbjct: 112 LLLVEKWEDSLKFLVLLCGINLLGDCFNGLTLLIFG 147
>AE014297-625|AAF54008.1| 154|Drosophila melanogaster CG1279-PA
protein.
Length = 154
Score = 42.7 bits (96), Expect = 5e-04
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = -1
Query: 351 LFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILG 244
L LVE DSLKF VLL + +G CFNG+TL+I G
Sbjct: 108 LLLVEKWEDSLKFLVLLCGINLLGDCFNGLTLLIFG 143
>AE014296-2343|AAF49771.3| 2294|Drosophila melanogaster CG32133-PA
protein.
Length = 2294
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 265 PVEARPHVREAPQQHAELQRVHQVLHQEQSAQL 363
P + +P +PQQ ++Q Q +HQ+Q QL
Sbjct: 684 PQQPQPQSMMSPQQQQQMQPFQQPVHQQQRMQL 716
>AF184227-1|AAD55738.1| 970|Drosophila melanogaster LD23194p
protein.
Length = 970
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 223 QREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 360
Q++Q + + ++ + + H ++ QQH + Q+ HQ HQ+Q Q
Sbjct: 708 QQQQLHQLKSPQQHQQQLQQHQQQQQQQHHQ-QQHHQQQHQQQQQQ 752
>AF017777-1|AAC28400.1| 836|Drosophila melanogaster tweety protein.
Length = 836
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 223 QREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 360
Q++Q + + ++ + + H ++ QQH + Q+ HQ HQ+Q Q
Sbjct: 708 QQQQLHQLKSPQQHQQQLQQHQQQQQQQHHQ-QQHHQQQHQQQQQQ 752
>AE014298-3117|AAN09675.3| 836|Drosophila melanogaster CG1693-PB,
isoform B protein.
Length = 836
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 223 QREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 360
Q++Q + + ++ + + H ++ QQH + Q+ HQ HQ+Q Q
Sbjct: 708 QQQQLHQLKSPQQHQQQLQQHQQQQQQQHHQ-QQHHQQQHQQQQQQ 752
>AE014298-3116|AAF50831.4| 970|Drosophila melanogaster CG1693-PA,
isoform A protein.
Length = 970
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 223 QREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 360
Q++Q + + ++ + + H ++ QQH + Q+ HQ HQ+Q Q
Sbjct: 708 QQQQLHQLKSPQQHQQQLQQHQQQQQQQHHQ-QQHHQQQHQQQQQQ 752
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,055,124
Number of Sequences: 53049
Number of extensions: 268410
Number of successful extensions: 1856
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1830
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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