Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17k08
(846 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 73 4e-13
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 72 1e-12
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 56 5e-08
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 47 4e-05
AY058686-1|AAL13915.1| 547|Drosophila melanogaster LD40728p pro... 36 0.070
AE014134-1900|AAF52961.2| 547|Drosophila melanogaster CG6187-PA... 36 0.070
L25314-1|AAA17685.1| 398|Drosophila melanogaster actin-related ... 31 1.5
AY058726-1|AAL13955.1| 398|Drosophila melanogaster LD47054p pro... 31 1.5
AE014298-2201|AAF48499.1| 398|Drosophila melanogaster CG11678-P... 31 1.5
AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA ... 30 3.5
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro... 30 4.6
AE014296-3533|AAS65088.1| 1094|Drosophila melanogaster CG33288-P... 30 4.6
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC... 30 4.6
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 29 8.0
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 73.3 bits (172), Expect = 4e-13
Identities = 35/101 (34%), Positives = 65/101 (64%), Gaps = 5/101 (4%)
Frame = +1
Query: 553 QHVDALSRN---ILFVDVELHARVKKAQADDESLKVIRKILEENEYEDYFLENGVIYKGI 723
+HVD LSR+ + + EL AR+KK+Q +D+S++ I +IL++ ++ Y L+ G++Y +
Sbjct: 590 RHVDFLSRHPQACMMITSELTARIKKSQQNDDSIRAILEILKDRLFQPYKLKGGLLYSMV 649
Query: 724 --EKKLVLPKILDMEIIKKAHRTGHFGKKKIRDIIEKDYFI 840
+ LV+P +++ E+I+ AH GH +K I++ +FI
Sbjct: 650 NGNELLVVPALMEREVIQSAHEVGHLSLQKTMHSIQQQFFI 690
Score = 50.4 bits (115), Expect = 3e-06
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +1
Query: 28 KSVKVGNYVTNCLIDTGSDLNLITFDLFTKLK-CEYIPEKMLLTGLGSSKVYSIGKFDTD 204
K V + + NCL+DTGSD+ +I +F K+K + +L GLG++ IG F
Sbjct: 11 KPVIINGIIINCLVDTGSDVTIIKEAIFKKMKDVDLNRTATVLRGLGNASTQPIGCFRAL 70
Query: 205 LTIDSHRYSINLYIVPTGGIPYDVILGQQFL 297
+ D S N+ +V D I+G F+
Sbjct: 71 IKTDQVEASHNVLVVHDSKFSCDGIVGHDFI 101
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 71.7 bits (168), Expect = 1e-12
Identities = 34/100 (34%), Positives = 64/100 (64%), Gaps = 5/100 (5%)
Frame = +1
Query: 553 QHVDALSRN---ILFVDVELHARVKKAQADDESLKVIRKILEENEYEDYFLENGVIYKGI 723
+HVD LSR+ + + EL AR+KK+Q +D+S++ I +IL++ ++ Y L+ G++Y +
Sbjct: 896 RHVDFLSRHPQACMMITSELTARIKKSQQNDDSIRAILEILKDRLFQPYKLKGGLLYSMV 955
Query: 724 --EKKLVLPKILDMEIIKKAHRTGHFGKKKIRDIIEKDYF 837
+ LV+P +++ E+I+ AH GH +K I++ +F
Sbjct: 956 NGNELLVVPALMEREVIQSAHEVGHLSLQKTMHSIQQQFF 995
Score = 50.4 bits (115), Expect = 3e-06
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +1
Query: 28 KSVKVGNYVTNCLIDTGSDLNLITFDLFTKLK-CEYIPEKMLLTGLGSSKVYSIGKFDTD 204
K V + + NCL+DTGSD+ +I +F K+K + +L GLG++ IG F
Sbjct: 317 KPVIINGIIINCLVDTGSDVTIIKEAIFKKMKDVDLNRTATVLRGLGNASTQPIGCFRAL 376
Query: 205 LTIDSHRYSINLYIVPTGGIPYDVILGQQFL 297
+ D S N+ +V D I+G F+
Sbjct: 377 IKTDQVEASHNVLVVHDSKFSCDGIVGHDFI 407
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 56.4 bits (130), Expect = 5e-08
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 7/102 (6%)
Frame = +1
Query: 553 QHVDALSR--NILFVDVE-LHARVKKAQADDESLKVIRKILEENEYEDYFLENGVIYKGI 723
QHVDALSR NI+ + + Q D LK IR++LE E + Y + NG++YK
Sbjct: 1125 QHVDALSRCTNIMVIQTNSFEDNLVICQGKDTKLKEIRQLLENTENKLYEMRNGIVYKKT 1184
Query: 724 -EKKLV--LPKILDMEIIKKAH-RTGHFGKKKIRDIIEKDYF 837
E +L+ +P ++ +++ K H GH G+ K+ + I K+Y+
Sbjct: 1185 NENRLLFYVPIEMEEQVLYKYHNELGHVGRDKMIEAIMKNYW 1226
Score = 30.7 bits (66), Expect = 2.6
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 52 VTNCLIDTGSDLNLITFDLFTK-LKCEYIPEKMLLTGLGSSKVYSIGKFDTDLTIDSHRY 228
++ CLID+GS +++I L + +K + GL + + + G+ + S +
Sbjct: 420 ISECLIDSGSPISIIKKSLINETMKLALV--NTCYFGLNNCILKTHGQTTCYVLKGSIKI 477
Query: 229 SINLYIVPTGGIPYDVILGQQFL 297
L IV + Y+VILG+ FL
Sbjct: 478 YFRLIIVCDQSMRYNVILGRDFL 500
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 46.8 bits (106), Expect = 4e-05
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Frame = +1
Query: 70 DTGSDLNLITFDLFTKLKCEYIPEKMLLTGLGSSKVYSIGKFDTDLTIDSHRYSINLYIV 249
D+G++ +LI D+ +KL + I +++ G+G V S + +++TI+ + I ++V
Sbjct: 299 DSGAECSLIKDDISSKLSGKRINNTVMIKGIGGGSVCSTLQILSEVTINENIMEILFHVV 358
Query: 250 PTGGIPYDVILGQQFLVNTITVI---DRGLVEVRPTCYDISY-QNAICLSSSS----NDQ 405
P + D+++G++ L VI D V T + S + + LS +++
Sbjct: 359 PNEEMRNDILIGREILKQGFYVILTSDNFKVVKSKTVNNCSVTERSFTLSDIDTELVDNE 418
Query: 406 CTAVREIIDSYTPLKTKDAPI------RLKIVLKDDV-PVSQRPRRLAITEEQLVKQHVD 564
+ E+++ ++ T P +KI L D V +RP RL+ E ++V+ V
Sbjct: 419 KAQLIELLEKHSTSFTNGIPHTRVNTGEMKIRLIDPTKTVQRRPYRLSPEEREVVRMQVS 478
Query: 565 ALSR 576
L R
Sbjct: 479 ELIR 482
>AY058686-1|AAL13915.1| 547|Drosophila melanogaster LD40728p
protein.
Length = 547
Score = 35.9 bits (79), Expect = 0.070
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 487 KDDVPVSQRPRRLAITEEQLVKQHVDALSRNILFVDVELHARVKKAQADDESLKVIRKIL 666
KD P + ++I+EE+ Q + LS + VKK + + SLK R
Sbjct: 58 KDGSPAESKDPPISISEEKSETQSKEVLSEKRKASSTDDEGHVKKVKLEANSLKTKRPGF 117
Query: 667 EENEYED--YFLENGV 708
+ Y++ Y+ ENG+
Sbjct: 118 SDERYDETSYYFENGL 133
>AE014134-1900|AAF52961.2| 547|Drosophila melanogaster CG6187-PA
protein.
Length = 547
Score = 35.9 bits (79), Expect = 0.070
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 487 KDDVPVSQRPRRLAITEEQLVKQHVDALSRNILFVDVELHARVKKAQADDESLKVIRKIL 666
KD P + ++I+EE+ Q + LS + VKK + + SLK R
Sbjct: 58 KDGSPAESKDPPISISEEKSETQSKEVLSEKRKASSTDDEGHVKKVKLEANSLKTKRPGF 117
Query: 667 EENEYED--YFLENGV 708
+ Y++ Y+ ENG+
Sbjct: 118 SDERYDETSYYFENGL 133
>L25314-1|AAA17685.1| 398|Drosophila melanogaster actin-related
protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 1.5
Identities = 27/108 (25%), Positives = 43/108 (39%)
Frame = +1
Query: 478 IVLKDDVPVSQRPRRLAITEEQLVKQHVDALSRNILFVDVELHARVKKAQADDESLKVIR 657
I KD + S R + ITE Q+ Q + + ILF + ++ K AD + +
Sbjct: 81 IFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAADLAAFNYVA 140
Query: 658 KILEENEYEDYFLENGVIYKGIEKKLVLPKILDMEIIKKAHRTGHFGK 801
E E L +I G V+P +L +++ R GK
Sbjct: 141 DSEERTTMES--LNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGK 186
>AY058726-1|AAL13955.1| 398|Drosophila melanogaster LD47054p
protein.
Length = 398
Score = 31.5 bits (68), Expect = 1.5
Identities = 27/108 (25%), Positives = 43/108 (39%)
Frame = +1
Query: 478 IVLKDDVPVSQRPRRLAITEEQLVKQHVDALSRNILFVDVELHARVKKAQADDESLKVIR 657
I KD + S R + ITE Q+ Q + + ILF + ++ K AD + +
Sbjct: 81 IFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAADLAAFNYVA 140
Query: 658 KILEENEYEDYFLENGVIYKGIEKKLVLPKILDMEIIKKAHRTGHFGK 801
E E L +I G V+P +L +++ R GK
Sbjct: 141 DSEERTTMES--LNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGK 186
>AE014298-2201|AAF48499.1| 398|Drosophila melanogaster CG11678-PA
protein.
Length = 398
Score = 31.5 bits (68), Expect = 1.5
Identities = 27/108 (25%), Positives = 43/108 (39%)
Frame = +1
Query: 478 IVLKDDVPVSQRPRRLAITEEQLVKQHVDALSRNILFVDVELHARVKKAQADDESLKVIR 657
I KD + S R + ITE Q+ Q + + ILF + ++ K AD + +
Sbjct: 81 IFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAADLAAFNYVA 140
Query: 658 KILEENEYEDYFLENGVIYKGIEKKLVLPKILDMEIIKKAHRTGHFGK 801
E E L +I G V+P +L +++ R GK
Sbjct: 141 DSEERTTMES--LNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGK 186
>AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA
protein.
Length = 4671
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 529 ITEEQLVKQ-HVDALSRNILFVDVELHARVKKAQADDESLKVIRKILEEN 675
+ EEQL KQ H D RNIL V L A ++ D ES V+R + + N
Sbjct: 2136 LCEEQLTKQVHYDFGLRNILSVLRTLGAAKRRNSKDTESTIVMRVLRDMN 2185
>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
Length = 16215
Score = 29.9 bits (64), Expect = 4.6
Identities = 18/74 (24%), Positives = 43/74 (58%)
Frame = +1
Query: 490 DDVPVSQRPRRLAITEEQLVKQHVDALSRNILFVDVELHARVKKAQADDESLKVIRKILE 669
++VPV + P +A EE+L+++ + + ++ + E +VKKA+ ++++ +E
Sbjct: 5830 EEVPVEEVPEDVA-PEEELIEEQEEIVDQDEI---QEQKRKVKKAKKPKKTIEKTEIEIE 5885
Query: 670 ENEYEDYFLENGVI 711
E++ E+ L+ +I
Sbjct: 5886 EDQPEEEVLQEEII 5899
>AE014296-3533|AAS65088.1| 1094|Drosophila melanogaster CG33288-PB
protein.
Length = 1094
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 574 RNILFVDVELHARVKKAQADDESLKVIRKILEENEYEDYFLEN 702
RNI D + AQ D + +IRK E++DY +N
Sbjct: 126 RNIFPEDTHVAQHFTSAQVDQQPCAIIRKPFRLEEFDDYLSKN 168
>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
isoform C protein.
Length = 18074
Score = 29.9 bits (64), Expect = 4.6
Identities = 18/74 (24%), Positives = 43/74 (58%)
Frame = +1
Query: 490 DDVPVSQRPRRLAITEEQLVKQHVDALSRNILFVDVELHARVKKAQADDESLKVIRKILE 669
++VPV + P +A EE+L+++ + + ++ + E +VKKA+ ++++ +E
Sbjct: 5830 EEVPVEEVPEDVA-PEEELIEEQEEIVDQDEI---QEQKRKVKKAKKPKKTIEKTEIEIE 5885
Query: 670 ENEYEDYFLENGVI 711
E++ E+ L+ +I
Sbjct: 5886 EDQPEEEVLQEEII 5899
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +1
Query: 760 EIIKKAHRTGHFGKKKIR-DIIEKDYF 837
EII+K HR H G +IR ++EK YF
Sbjct: 695 EIIEKEHRRAHRGPTEIRLQLLEKYYF 721
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,194,995
Number of Sequences: 53049
Number of extensions: 710430
Number of successful extensions: 1480
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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