Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17k07
         (803 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM492791-1|CAM34545.1|  712|Homo sapiens autogenous vein graft r...    31   3.7  
BC000322-1|AAH00322.1| 1193|Homo sapiens sperm associated antige...    31   6.4  
AL137585-1|CAB70827.1| 1027|Homo sapiens hypothetical protein pr...    31   6.4  
AF399910-1|AAK91712.1| 1193|Homo sapiens mitotic spindle associa...    31   6.4  

>AM492791-1|CAM34545.1|  712|Homo sapiens autogenous vein graft
           remodeling associated protein 8 protein.
          Length = 712

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 23/85 (27%), Positives = 39/85 (45%)
 Frame = -1

Query: 542 TGPYTLSWQKFETCKGPKQTDCGKFGVENTQNMSDLVFLLDFPKDCPATAAKITVSTIQN 363
           TG  ++SW+  + C+  + TDC K  V   Q +  ++     P       ++IT S  Q+
Sbjct: 300 TGRDSISWKDIQHCRKQRATDCLKVDVGQAQWLMPVI-----PALLGGQGSQITRSGDQS 354

Query: 362 GKTSKKLWNYAINKPCQHFVLGPII 288
           GK S+      I K  + +   P+I
Sbjct: 355 GKHSETPSLLKIQKISRVWQCAPVI 379


>BC000322-1|AAH00322.1| 1193|Homo sapiens sperm associated antigen 5
            protein.
          Length = 1193

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 18/70 (25%), Positives = 31/70 (44%)
 Frame = -2

Query: 517  KSLKHARAQNRQIAVNLELKTHKICQTLCFSWIFQKTALQPQPKSLSVQFKTERHQKNYG 338
            +SL+ A  + + +   L  +    CQ +  +WI +K  L  +   L V F   +++K   
Sbjct: 1077 RSLRRAETETKVLQEALAGQLDSNCQPMATNWIQEKVWLSQEVDKLRVMFLEMKNEKEKL 1136

Query: 337  TTLSTSHVNI 308
                 SH NI
Sbjct: 1137 MIKFQSHRNI 1146


>AL137585-1|CAB70827.1| 1027|Homo sapiens hypothetical protein
            protein.
          Length = 1027

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 18/70 (25%), Positives = 31/70 (44%)
 Frame = -2

Query: 517  KSLKHARAQNRQIAVNLELKTHKICQTLCFSWIFQKTALQPQPKSLSVQFKTERHQKNYG 338
            +SL+ A  + + +   L  +    CQ +  +WI +K  L  +   L V F   +++K   
Sbjct: 911  RSLRRAETETKVLQEALAGQLDSNCQPMATNWIQEKVWLSQEVDKLRVMFLEMKNEKEKL 970

Query: 337  TTLSTSHVNI 308
                 SH NI
Sbjct: 971  MIKFQSHRNI 980


>AF399910-1|AAK91712.1| 1193|Homo sapiens mitotic spindle associated
            protein protein.
          Length = 1193

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 18/70 (25%), Positives = 31/70 (44%)
 Frame = -2

Query: 517  KSLKHARAQNRQIAVNLELKTHKICQTLCFSWIFQKTALQPQPKSLSVQFKTERHQKNYG 338
            +SL+ A  + + +   L  +    CQ +  +WI +K  L  +   L V F   +++K   
Sbjct: 1077 RSLRRAETETKVLQEALAGQLDSNCQPMATNWIQEKVWLSQEVDKLRVMFLEMKNEKEKL 1136

Query: 337  TTLSTSHVNI 308
                 SH NI
Sbjct: 1137 MIKFQSHRNI 1146


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,968,356
Number of Sequences: 237096
Number of extensions: 2725807
Number of successful extensions: 4907
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4907
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)