Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17j18
(262 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07656-2|CAA30503.1| 982|Drosophila melanogaster protein ( Dros... 86 6e-18
AY119276-1|AAM51136.1| 714|Drosophila melanogaster SD26211p pro... 86 6e-18
AF492763-1|AAM11672.1| 415|Drosophila melanogaster polyprotein ... 74 2e-14
X04456-2|CAD27357.1| 1017|Drosophila melanogaster hypothetical p... 60 3e-10
X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical p... 60 3e-10
X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprot... 60 3e-10
BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p pro... 60 3e-10
X02600-2|CAA26446.1| 146|Drosophila melanogaster protein ( Dros... 45 2e-05
AY069850-1|AAL39995.1| 755|Drosophila melanogaster SD09792p pro... 31 0.22
AE014297-3575|AAN14003.1| 755|Drosophila melanogaster CG13624-P... 31 0.22
AE014297-3574|AAN14002.1| 755|Drosophila melanogaster CG13624-P... 31 0.22
AE014297-3573|AAN14001.1| 755|Drosophila melanogaster CG13624-P... 31 0.22
AE014297-3572|AAF56314.2| 755|Drosophila melanogaster CG13624-P... 31 0.22
AE014297-3571|ABI31204.1| 814|Drosophila melanogaster CG13624-P... 31 0.22
AE014297-3570|ABI31203.1| 814|Drosophila melanogaster CG13624-P... 31 0.22
AE014296-390|AAF47594.1| 553|Drosophila melanogaster CG12361-PA... 30 0.51
AY008258-1|AAG16637.1| 2035|Drosophila melanogaster ecdysone rec... 29 1.2
AE014134-1613|AAF52754.2| 2047|Drosophila melanogaster CG13109-P... 29 1.2
AE013599-848|AAF58952.2| 875|Drosophila melanogaster CG13739-PA... 29 1.2
AY119553-1|AAM50207.1| 878|Drosophila melanogaster GH27971p pro... 27 4.8
AY061538-1|AAL29086.1| 196|Drosophila melanogaster LP02106p pro... 27 4.8
AF020349-1|AAC15518.1| 756|Drosophila melanogaster CROL GAMMA p... 27 4.8
AF020348-1|AAC15517.1| 891|Drosophila melanogaster CROL BETA pr... 27 4.8
AF020347-1|AAC15516.1| 962|Drosophila melanogaster CROL ALPHA p... 27 4.8
AE014134-2098|AAF53121.2| 962|Drosophila melanogaster CG14938-P... 27 4.8
AE014134-2097|AAN10786.1| 891|Drosophila melanogaster CG14938-P... 27 4.8
AE014134-2096|AAN10785.1| 878|Drosophila melanogaster CG14938-P... 27 4.8
AE014134-2095|AAN10784.1| 756|Drosophila melanogaster CG14938-P... 27 4.8
Y07662-1|CAA68943.1| 949|Drosophila melanogaster GATA factor pr... 26 8.3
U42403-1|AAB02355.1| 1180|Drosophila melanogaster stripe a prote... 26 8.3
U42402-1|AAB02354.1| 906|Drosophila melanogaster stripe b prote... 26 8.3
AY069823-1|AAL39968.1| 950|Drosophila melanogaster SD07261p pro... 26 8.3
AE014297-2131|AAF55261.2| 1264|Drosophila melanogaster CG3992-PA... 26 8.3
AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB... 26 8.3
AE014296-1126|AAN12084.1| 1943|Drosophila melanogaster CG32397-P... 26 8.3
>X07656-2|CAA30503.1| 982|Drosophila melanogaster protein (
Drosophila melanogasterretrotransposon 1731 sequence. ).
Length = 982
Score = 86.2 bits (204), Expect = 6e-18
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +3
Query: 6 IHYSKGDNILRGFCDSDFAGDPDTRRSTSGFVIWMNGGPIAWSSRKQSVVALSSTEAEYI 185
+HY K GF D+D+ GD R+S +G+V +++GGP++W S KQ VALSSTEAEY+
Sbjct: 864 LHYQKCGQAFTGFVDADWGGDRLDRKSYTGYVFFLSGGPVSWRSEKQQSVALSSTEAEYM 923
Query: 186 AAAECCKELLYIRDLVKEI 242
A CKE + +R L+ EI
Sbjct: 924 ALTTACKEAIALRRLIVEI 942
>AY119276-1|AAM51136.1| 714|Drosophila melanogaster SD26211p
protein.
Length = 714
Score = 86.2 bits (204), Expect = 6e-18
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +3
Query: 6 IHYSKGDNILRGFCDSDFAGDPDTRRSTSGFVIWMNGGPIAWSSRKQSVVALSSTEAEYI 185
+HY K GF D+D+ GD R+S +G+V +++GGP++W S KQ VALSSTEAEY+
Sbjct: 552 LHYQKCGQAFTGFVDADWGGDRLDRKSYTGYVFFLSGGPVSWRSEKQQSVALSSTEAEYM 611
Query: 186 AAAECCKELLYIRDLVKEI 242
A CKE + +R L+ EI
Sbjct: 612 ALTTACKEAIALRRLIVEI 630
>AF492763-1|AAM11672.1| 415|Drosophila melanogaster polyprotein
protein.
Length = 415
Score = 74.1 bits (174), Expect = 2e-14
Identities = 35/79 (44%), Positives = 51/79 (64%)
Frame = +3
Query: 6 IHYSKGDNILRGFCDSDFAGDPDTRRSTSGFVIWMNGGPIAWSSRKQSVVALSSTEAEYI 185
I Y K +++ F D+D+A D R+S SG+ M G +W S KQSV+A SSTEAEYI
Sbjct: 255 IIYMKTGELVKEFADADWANDKVDRKSYSGYAFLMAGSAFSWGSSKQSVIAQSSTEAEYI 314
Query: 186 AAAECCKELLYIRDLVKEI 242
A + KE +++R L++E+
Sbjct: 315 ALSTAAKEAVFLRRLLQEM 333
>X04456-2|CAD27357.1| 1017|Drosophila melanogaster hypothetical
protein protein.
Length = 1017
Score = 60.5 bits (140), Expect = 3e-10
Identities = 30/74 (40%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +3
Query: 24 DNILRGFCDSDFAGDPDTRRSTSGFVIWM-NGGPIAWSSRKQSVVALSSTEAEYIAAAEC 200
+N + G+ DSD+AG R+ST+G++ M + I W++++Q+ VA SSTEAEY+A E
Sbjct: 853 ENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEA 912
Query: 201 CKELLYIRDLVKEI 242
+E L+++ L+ I
Sbjct: 913 VREALWLKFLLTSI 926
>X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical
protein protein.
Length = 1409
Score = 60.5 bits (140), Expect = 3e-10
Identities = 30/74 (40%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +3
Query: 24 DNILRGFCDSDFAGDPDTRRSTSGFVIWM-NGGPIAWSSRKQSVVALSSTEAEYIAAAEC 200
+N + G+ DSD+AG R+ST+G++ M + I W++++Q+ VA SSTEAEY+A E
Sbjct: 1245 ENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEA 1304
Query: 201 CKELLYIRDLVKEI 242
+E L+++ L+ I
Sbjct: 1305 VREALWLKFLLTSI 1318
>X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprotein
protein.
Length = 1409
Score = 60.5 bits (140), Expect = 3e-10
Identities = 30/74 (40%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +3
Query: 24 DNILRGFCDSDFAGDPDTRRSTSGFVIWM-NGGPIAWSSRKQSVVALSSTEAEYIAAAEC 200
+N + G+ DSD+AG R+ST+G++ M + I W++++Q+ VA SSTEAEY+A E
Sbjct: 1245 ENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEA 1304
Query: 201 CKELLYIRDLVKEI 242
+E L+++ L+ I
Sbjct: 1305 VREALWLKFLLTSI 1318
>BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p protein.
Length = 1409
Score = 60.5 bits (140), Expect = 3e-10
Identities = 30/74 (40%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +3
Query: 24 DNILRGFCDSDFAGDPDTRRSTSGFVIWM-NGGPIAWSSRKQSVVALSSTEAEYIAAAEC 200
+N + G+ DSD+AG R+ST+G++ M + I W++++Q+ VA SSTEAEY+A E
Sbjct: 1245 ENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEA 1304
Query: 201 CKELLYIRDLVKEI 242
+E L+++ L+ I
Sbjct: 1305 VREALWLKFLLTSI 1318
>X02600-2|CAA26446.1| 146|Drosophila melanogaster protein (
Drosophila melanogastervirus like particle RNA (VLP
H-RNA). ).
Length = 146
Score = 44.8 bits (101), Expect = 2e-05
Identities = 22/55 (40%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +3
Query: 81 RSTSGFVIWM-NGGPIAWSSRKQSVVALSSTEAEYIAAAECCKELLYIRDLVKEI 242
+ST+G++ M + I W++++Q+ VA SSTEAEY+A E +E L+++ L+ I
Sbjct: 1 KSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSI 55
>AY069850-1|AAL39995.1| 755|Drosophila melanogaster SD09792p
protein.
Length = 755
Score = 31.1 bits (67), Expect = 0.22
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = -2
Query: 216 IAVPYSILQQQ---YTQLQCSKVPQL--IVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQ 52
+A P +LQQQ + QLQ +PQL ++ LS Q + SS S + Y + Q Q+ Q
Sbjct: 335 VAPPMELLQQQQQNHQQLQVGSLPQLQTLLTLSQQQQSNSSSTSPYEIYHSTPQKPQQQQ 394
>AE014297-3575|AAN14003.1| 755|Drosophila melanogaster CG13624-PD,
isoform D protein.
Length = 755
Score = 31.1 bits (67), Expect = 0.22
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = -2
Query: 216 IAVPYSILQQQ---YTQLQCSKVPQL--IVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQ 52
+A P +LQQQ + QLQ +PQL ++ LS Q + SS S + Y + Q Q+ Q
Sbjct: 335 VAPPMELLQQQQQNHQQLQVGSLPQLQTLLTLSQQQQSNSSSTSPYEIYHSTPQKPQQQQ 394
>AE014297-3574|AAN14002.1| 755|Drosophila melanogaster CG13624-PC,
isoform C protein.
Length = 755
Score = 31.1 bits (67), Expect = 0.22
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = -2
Query: 216 IAVPYSILQQQ---YTQLQCSKVPQL--IVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQ 52
+A P +LQQQ + QLQ +PQL ++ LS Q + SS S + Y + Q Q+ Q
Sbjct: 335 VAPPMELLQQQQQNHQQLQVGSLPQLQTLLTLSQQQQSNSSSTSPYEIYHSTPQKPQQQQ 394
>AE014297-3573|AAN14001.1| 755|Drosophila melanogaster CG13624-PB,
isoform B protein.
Length = 755
Score = 31.1 bits (67), Expect = 0.22
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = -2
Query: 216 IAVPYSILQQQ---YTQLQCSKVPQL--IVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQ 52
+A P +LQQQ + QLQ +PQL ++ LS Q + SS S + Y + Q Q+ Q
Sbjct: 335 VAPPMELLQQQQQNHQQLQVGSLPQLQTLLTLSQQQQSNSSSTSPYEIYHSTPQKPQQQQ 394
>AE014297-3572|AAF56314.2| 755|Drosophila melanogaster CG13624-PA,
isoform A protein.
Length = 755
Score = 31.1 bits (67), Expect = 0.22
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = -2
Query: 216 IAVPYSILQQQ---YTQLQCSKVPQL--IVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQ 52
+A P +LQQQ + QLQ +PQL ++ LS Q + SS S + Y + Q Q+ Q
Sbjct: 335 VAPPMELLQQQQQNHQQLQVGSLPQLQTLLTLSQQQQSNSSSTSPYEIYHSTPQKPQQQQ 394
>AE014297-3571|ABI31204.1| 814|Drosophila melanogaster CG13624-PF,
isoform F protein.
Length = 814
Score = 31.1 bits (67), Expect = 0.22
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = -2
Query: 216 IAVPYSILQQQ---YTQLQCSKVPQL--IVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQ 52
+A P +LQQQ + QLQ +PQL ++ LS Q + SS S + Y + Q Q+ Q
Sbjct: 335 VAPPMELLQQQQQNHQQLQVGSLPQLQTLLTLSQQQQSNSSSTSPYEIYHSTPQKPQQQQ 394
>AE014297-3570|ABI31203.1| 814|Drosophila melanogaster CG13624-PE,
isoform E protein.
Length = 814
Score = 31.1 bits (67), Expect = 0.22
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = -2
Query: 216 IAVPYSILQQQ---YTQLQCSKVPQL--IVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQ 52
+A P +LQQQ + QLQ +PQL ++ LS Q + SS S + Y + Q Q+ Q
Sbjct: 335 VAPPMELLQQQQQNHQQLQVGSLPQLQTLLTLSQQQQSNSSSTSPYEIYHSTPQKPQQQQ 394
>AE014296-390|AAF47594.1| 553|Drosophila melanogaster CG12361-PA
protein.
Length = 553
Score = 29.9 bits (64), Expect = 0.51
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -2
Query: 153 QLIVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQNHKNLSIYCHLYCNEY 4
+L ++ QL HH + Q Q+ Q Q H+ S + LY ++Y
Sbjct: 490 ELAAAAAAAQLHHHHQQQQQQQQQQHAQQQHAQQQHQGGSEFMKLYYDDY 539
>AY008258-1|AAG16637.1| 2035|Drosophila melanogaster ecdysone receptor
co-activatorTaiman protein.
Length = 2035
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -2
Query: 216 IAVPYSILQQQYTQLQCSKVPQLIVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQNHK 43
+A+ + QQQ Q + P L+ Q H + QNQ++ + + RNQ ++
Sbjct: 1413 LALQLAQQQQQQRQQHLQQPPAYPGMLNMQQQQHQQQQQQNQQHIMQRLEAMRNQGNQ 1470
>AE014134-1613|AAF52754.2| 2047|Drosophila melanogaster CG13109-PA
protein.
Length = 2047
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -2
Query: 216 IAVPYSILQQQYTQLQCSKVPQLIVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQNHK 43
+A+ + QQQ Q + P L+ Q H + QNQ++ + + RNQ ++
Sbjct: 1413 LALQLAQQQQQQRQQHLQQPPAYPGMLNMQQQQHQQQQQQNQQHIMQRLEAMRNQGNQ 1470
>AE013599-848|AAF58952.2| 875|Drosophila melanogaster CG13739-PA
protein.
Length = 875
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 138 LSSMQLVHHSSRSQNQKYFVSCQDHQRNQNHKNLSIYCHLY 16
LS+ Q HH + Q Q + Q HQ+ Q + ++ H +
Sbjct: 193 LSARQQHHHLLQQQQQHHHQQQQQHQQQQQQQQHQLHLHTF 233
>AY119553-1|AAM50207.1| 878|Drosophila melanogaster GH27971p
protein.
Length = 878
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 192 QQQYTQLQCSKVPQLIVFLSSMQLVHHSSRSQN-QKYFVSCQDHQRNQNHK 43
QQQ QLQ Q ++ LS Q HH + Q+ Q+ Q Q+ Q+H+
Sbjct: 780 QQQQQQLQQQ---QQLLQLSIQQAAHHHQQEQHRQQQQQQHQQQQQQQHHQ 827
>AY061538-1|AAL29086.1| 196|Drosophila melanogaster LP02106p
protein.
Length = 196
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 192 QQQYTQLQCSKVPQLIVFLSSMQLVHHSSRSQN-QKYFVSCQDHQRNQNHK 43
QQQ QLQ Q ++ LS Q HH + Q+ Q+ Q Q+ Q+H+
Sbjct: 98 QQQQQQLQQQ---QQLLQLSIQQAAHHHQQEQHRQQQQQQHQQQQQQQHHQ 145
>AF020349-1|AAC15518.1| 756|Drosophila melanogaster CROL GAMMA
protein.
Length = 756
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 192 QQQYTQLQCSKVPQLIVFLSSMQLVHHSSRSQN-QKYFVSCQDHQRNQNHK 43
QQQ QLQ Q ++ LS Q HH + Q+ Q+ Q Q+ Q+H+
Sbjct: 658 QQQQQQLQQQ---QQLLQLSIQQAAHHHQQEQHRQQQQQQHQQQQQQQHHQ 705
>AF020348-1|AAC15517.1| 891|Drosophila melanogaster CROL BETA
protein.
Length = 891
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 192 QQQYTQLQCSKVPQLIVFLSSMQLVHHSSRSQN-QKYFVSCQDHQRNQNHK 43
QQQ QLQ Q ++ LS Q HH + Q+ Q+ Q Q+ Q+H+
Sbjct: 793 QQQQQQLQQQ---QQLLQLSIQQAAHHHQQEQHRQQQQQQHQQQQQQQHHQ 840
>AF020347-1|AAC15516.1| 962|Drosophila melanogaster CROL ALPHA
protein.
Length = 962
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 192 QQQYTQLQCSKVPQLIVFLSSMQLVHHSSRSQN-QKYFVSCQDHQRNQNHK 43
QQQ QLQ Q ++ LS Q HH + Q+ Q+ Q Q+ Q+H+
Sbjct: 864 QQQQQQLQQQ---QQLLQLSIQQAAHHHQQEQHRQQQQQQHQQQQQQQHHQ 911
>AE014134-2098|AAF53121.2| 962|Drosophila melanogaster CG14938-PA,
isoform A protein.
Length = 962
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 192 QQQYTQLQCSKVPQLIVFLSSMQLVHHSSRSQN-QKYFVSCQDHQRNQNHK 43
QQQ QLQ Q ++ LS Q HH + Q+ Q+ Q Q+ Q+H+
Sbjct: 864 QQQQQQLQQQ---QQLLQLSIQQAAHHHQQEQHRQQQQQQHQQQQQQQHHQ 911
>AE014134-2097|AAN10786.1| 891|Drosophila melanogaster CG14938-PB,
isoform B protein.
Length = 891
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 192 QQQYTQLQCSKVPQLIVFLSSMQLVHHSSRSQN-QKYFVSCQDHQRNQNHK 43
QQQ QLQ Q ++ LS Q HH + Q+ Q+ Q Q+ Q+H+
Sbjct: 793 QQQQQQLQQQ---QQLLQLSIQQAAHHHQQEQHRQQQQQQHQQQQQQQHHQ 840
>AE014134-2096|AAN10785.1| 878|Drosophila melanogaster CG14938-PD,
isoform D protein.
Length = 878
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 192 QQQYTQLQCSKVPQLIVFLSSMQLVHHSSRSQN-QKYFVSCQDHQRNQNHK 43
QQQ QLQ Q ++ LS Q HH + Q+ Q+ Q Q+ Q+H+
Sbjct: 780 QQQQQQLQQQ---QQLLQLSIQQAAHHHQQEQHRQQQQQQHQQQQQQQHHQ 827
>AE014134-2095|AAN10784.1| 756|Drosophila melanogaster CG14938-PC,
isoform C protein.
Length = 756
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 192 QQQYTQLQCSKVPQLIVFLSSMQLVHHSSRSQN-QKYFVSCQDHQRNQNHK 43
QQQ QLQ Q ++ LS Q HH + Q+ Q+ Q Q+ Q+H+
Sbjct: 658 QQQQQQLQQQ---QQLLQLSIQQAAHHHQQEQHRQQQQQQHQQQQQQQHHQ 705
>Y07662-1|CAA68943.1| 949|Drosophila melanogaster GATA factor
protein.
Length = 949
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 126 QLVHHSSRSQNQKYFVSCQDHQRNQNH 46
Q +HH + Q Q Y Q Q+ Q+H
Sbjct: 101 QQLHHHQQQQQQLYHQQQQQQQQQQHH 127
>U42403-1|AAB02355.1| 1180|Drosophila melanogaster stripe a protein
protein.
Length = 1180
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = -2
Query: 192 QQQYTQLQCSKVPQLIVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQNHKNLSIY 28
QQQY Q Q Q + HH SQ Q+ Q Q+ Q H+ ++
Sbjct: 621 QQQYQQHQILHQQQQFGYHHHHHHHHHHHHSQLQQLQQQQQQQQQQQQHQQQPLH 675
>U42402-1|AAB02354.1| 906|Drosophila melanogaster stripe b protein
protein.
Length = 906
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = -2
Query: 192 QQQYTQLQCSKVPQLIVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQNHKNLSIY 28
QQQY Q Q Q + HH SQ Q+ Q Q+ Q H+ ++
Sbjct: 347 QQQYQQHQILHQQQQFGYHHHHHHHHHHHHSQLQQLQQQQQQQQQQQQHQQQPLH 401
>AY069823-1|AAL39968.1| 950|Drosophila melanogaster SD07261p
protein.
Length = 950
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 126 QLVHHSSRSQNQKYFVSCQDHQRNQNH 46
Q +HH + Q Q Y Q Q+ Q+H
Sbjct: 101 QQLHHHQQQQQQLYHQQQQQQQQQQHH 127
>AE014297-2131|AAF55261.2| 1264|Drosophila melanogaster CG3992-PA,
isoform A protein.
Length = 1264
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 126 QLVHHSSRSQNQKYFVSCQDHQRNQNH 46
Q +HH + Q Q Y Q Q+ Q+H
Sbjct: 415 QQLHHHQQQQQQLYHQQQQQQQQQQHH 441
>AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB,
isoform B protein.
Length = 1249
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 126 QLVHHSSRSQNQKYFVSCQDHQRNQNH 46
Q +HH + Q Q Y Q Q+ Q+H
Sbjct: 415 QQLHHHQQQQQQLYHQQQQQQQQQQHH 441
>AE014296-1126|AAN12084.1| 1943|Drosophila melanogaster CG32397-PA
protein.
Length = 1943
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 132 SMQLVHHSSRSQNQKYFVSCQDHQRNQNHKNL 37
S QL HH S NQ + Q H Q H NL
Sbjct: 147 SQQLHHHHSNQVNQHHHQQQQSHHHLQ-HANL 177
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,649,558
Number of Sequences: 53049
Number of extensions: 219822
Number of successful extensions: 1053
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 24,988,368
effective HSP length: 65
effective length of database: 21,540,183
effective search space used: 452343843
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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