Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17i08
(887 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0582 + 26369537-26369914,26371598-26371887,26371985-263721... 47 2e-05
10_08_0489 + 18269824-18270270,18271659-18271948,18272341-182725... 45 9e-05
07_01_1182 + 11207282-11207330,11208015-11208094,11208181-112086... 44 2e-04
05_03_0017 - 7392742-7393110,7393212-7393319,7393522-7394079,739... 43 3e-04
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635... 38 0.008
09_02_0067 - 3812508-3813158,3813944-3814030,3814124-3814312,381... 38 0.011
01_06_0556 + 30207124-30207581,30207692-30207901,30208016-302081... 33 0.23
12_02_0031 - 12477787-12478413,12480182-12480268,12480371-124805... 33 0.40
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606... 32 0.53
02_02_0654 - 12662931-12663200,12663296-12663550,12664097-126642... 32 0.70
02_02_0620 + 12210812-12210997,12212397-12212474,12212744-122128... 31 0.93
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 31 1.2
06_03_0437 - 20765682-20765951,20766040-20766294,20766374-207665... 31 1.2
01_05_0703 - 24404580-24406373 31 1.2
06_03_0179 - 17604561-17606435 31 1.6
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 30 2.8
12_01_0833 - 7730761-7731030,7731171-7731425,7731565-7731736,773... 29 3.7
07_03_0635 + 20151861-20152249,20152589-20152709,20154914-201549... 29 3.7
11_06_0223 - 21419128-21419397,21419493-21419747,21420243-214204... 29 4.9
07_01_0663 + 4975950-4977688,4978183-4978528 28 8.6
02_05_0408 + 28720508-28721052,28721346-28721430,28721520-287216... 28 8.6
>04_04_0582 +
26369537-26369914,26371598-26371887,26371985-26372156,
26372271-26372393,26372499-26372627,26372785-26372979,
26373128-26373214,26373296-26373568,26374166-26374273,
26374363-26374686
Length = 692
Score = 46.8 bits (106), Expect = 2e-05
Identities = 33/102 (32%), Positives = 47/102 (46%)
Frame = -1
Query: 815 YYEESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYPILADISESLDYIHFSLVLWS 636
+ E GHY A+ ++S I +LPF + F S I Y ++ YI F L L++
Sbjct: 460 FQRERLNGHYGVAAFVISNTISALPFLVLICFLSGTICYFMVRLHPGFSHYIFFVLNLYA 519
Query: 635 SYIYAEQQAIAIMVFVKNGLNAAIVNLYITCIYVMLASGVLR 510
S E +AI + N L I+ I I+ ML SG R
Sbjct: 520 SVTVVESLMMAIASVIPNFLMGIIIGAGIQGIF-MLVSGYFR 560
>10_08_0489 +
18269824-18270270,18271659-18271948,18272341-18272512,
18272608-18272730,18272832-18272960,18273061-18273255,
18273384-18273470,18273563-18273835,18274047-18274154,
18274769-18275116
Length = 723
Score = 44.8 bits (101), Expect = 9e-05
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Frame = -1
Query: 815 YYEESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYPILADISESLDYIHFSLVLWS 636
+ E GHY + ++S I ++PF + +F S + Y ++ Y+ F L L++
Sbjct: 483 FQRERLNGHYGVLAFVISNTISAMPFLILITFISGTMCYFMVRLHPGFTHYLFFVLCLYA 542
Query: 635 SYIYAEQQAIAIMVFVKNGLNAAIVNLYITCIYVMLASGVLRSYKGFED--WLHYLTYIT 462
S E +AI + N L I+ I I+ ML SG R W + ++YI+
Sbjct: 543 SVTVVESLMMAIASVIPNFLMGIIIGAGIQGIF-MLVSGYFRLPHDIPKPFWRYPMSYIS 601
Query: 461 HTRYA 447
+A
Sbjct: 602 FHYWA 606
>07_01_1182 +
11207282-11207330,11208015-11208094,11208181-11208645,
11213485-11213568,11213925-11214113,11214191-11214277,
11214343-11214969
Length = 526
Score = 44.0 bits (99), Expect = 2e-04
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Frame = -1
Query: 815 YYEESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYPILADISESLD-YIHFSLVLW 639
+ +E GHY ++S + S+P+ + S AI Y L + +D +I+F+ VLW
Sbjct: 320 FRKERMSGHYGATEFVISNTLSSIPYLGLISIIPGAIAY-YLTGLQRGIDHFIYFAAVLW 378
Query: 638 SSYIYAEQQAIAIMVFVKNGLNAAIVNLYITCIYVMLASGVLRSYKGFED--WLHYLTYI 465
+ + E + + V + L I + + +ML +G R W + +I
Sbjct: 379 ACTMLVEGLMMIVAAVVPDFLLGIITGSGVQGV-LMLNAGFFRLPSDLPKPVWKYPTYFI 437
Query: 464 THTRYASIFLHR 429
++ +YA+ L++
Sbjct: 438 SYHKYATQGLYK 449
>05_03_0017 -
7392742-7393110,7393212-7393319,7393522-7394079,
7394186-7394311,7394396-7394521,7394673-7395137,
7396822-7396901,7397394-7397664
Length = 700
Score = 43.2 bits (97), Expect = 3e-04
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Frame = -1
Query: 806 ESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYPILADISESLDYIHFSLVLWSSYI 627
E Q GHY A+ ++S + S+PF S+ASA+I Y ++ + F+L L+
Sbjct: 456 ERQNGHYGVAAYIISNFLSSMPFLLAVSWASASITYWMVKFRPGFSYFAFFALNLYGGVS 515
Query: 626 YAEQQAIAIMVFVKNGLNAAIVNLYITCIYVMLASGVLRSYKGFED--WLHYLTYITH 459
E + I V N L I+ + I +ML SG R W + ++YI +
Sbjct: 516 VIESLMMIISALVPNFLMGLILGAGVIGI-MMLTSGFFRLLPELPKIFWRYPVSYIVY 572
>08_02_1457 + 27260841-27260965,27261126-27261246,27263455-27263543,
27263776-27263860,27263970-27264074,27264446-27264527,
27264573-27264686,27265029-27265330,27265519-27266114,
27266216-27266376,27266489-27266592,27266697-27266856,
27266942-27267105,27267213-27267545,27267640-27267930,
27268276-27268359,27268430-27268563,27268665-27268892,
27268993-27269164,27269263-27269517,27269778-27270047
Length = 1324
Score = 38.3 bits (85), Expect = 0.008
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = -1
Query: 866 FVSIMNTICLY---GPYRTRYYEESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYP 696
F+ MN L G R Y E G YS + ++ V LP+ + F +AI+YP
Sbjct: 1112 FLGFMNCSILQPVVGMERVVLYREKAAGMYSTMAYAIAQVAVELPYMFVQVFIFSAIVYP 1171
Query: 695 ILADISESLDYIHFSLVLWSSYIY 624
++ + + F+L + S++Y
Sbjct: 1172 MIGFQMTATKFFWFALYMVLSFLY 1195
>09_02_0067 -
3812508-3813158,3813944-3814030,3814124-3814312,
3814475-3814603,3814917-3815003,3815126-3815563
Length = 526
Score = 37.9 bits (84), Expect = 0.011
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Frame = -1
Query: 806 ESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYPILADISESLD-YIHFSLVLWSSY 630
E GHY + ++S + S P+ + + AI Y L + + +D +I+F+LVL S
Sbjct: 315 ERLNGHYGVVTFVISNTLSSTPYLLLIAVVPGAIAY-YLTGLQKQIDHFIYFALVLCSCT 373
Query: 629 IYAEQQAIAIMVFVKNGLNAAIVNLYITCIYVMLASGVLRSYKGFED--WLHYLTYITHT 456
+ E + + V + L I I I +ML SG + W + + YI+
Sbjct: 374 MLVEGLMMIVATIVPDFLMGIITGAGIQGI-MMLNSGFFQLPNNLPKIVWKYLIYYISFH 432
Query: 455 RYA 447
+ A
Sbjct: 433 KNA 435
>01_06_0556 + 30207124-30207581,30207692-30207901,30208016-30208100,
30208517-30208676,30208768-30208844,30208985-30209032,
30209504-30209594,30209703-30210004,30210214-30210495,
30210695-30211011,30211113-30211273,30211556-30211665,
30211752-30211902,30212438-30212578,30212688-30212857,
30213485-30213817,30213981-30214271,30214356-30214439,
30214620-30214753,30214946-30215173,30215273-30215444,
30215621-30215875,30215963-30216232
Length = 1509
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = -1
Query: 824 RTRYYEESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYPILADISESLDYIHFSLV 645
RT +Y E G YS L+ +V +P+ + + I+YP+++ + F V
Sbjct: 1314 RTVFYRERAAGMYSAIPYALAQVVVEIPYVFVETVIYTLIVYPMMSFQWTPAKFFWFFYV 1373
Query: 644 LWSSYIY 624
+ +++Y
Sbjct: 1374 SFFTFLY 1380
>12_02_0031 -
12477787-12478413,12480182-12480268,12480371-12480562,
12480638-12480766,12480840-12480926,12483076-12483537,
12485088-12485222
Length = 572
Score = 32.7 bits (71), Expect = 0.40
Identities = 27/139 (19%), Positives = 52/139 (37%), Gaps = 2/139 (1%)
Frame = -1
Query: 815 YYEESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYPILADISESLDYIHFSLVLWS 636
+ E GHY ++S + + P+ + AI+Y + + +F + L+
Sbjct: 366 FRRERLSGHYGVTEFVISNTLSATPYLAVMIIIPGAILYYLTGLTRGGSNIAYFVVTLYM 425
Query: 635 SYIYAEQQAIAIMVFVKNGLNAAIVNLYITCIYVMLASGVLRSYKGFED--WLHYLTYIT 462
+ E + I V + L +V + + +M G R W + YI+
Sbjct: 426 CIVLVESIMMVIAAVVPDFLMGIVVGSGVQAL-MMTNGGFFRLPNQLPKPVWKYPCYYIS 484
Query: 461 HTRYASIFLHRTVFKQPTF 405
+YA ++ F TF
Sbjct: 485 FHKYAVQGFYKNEFVGQTF 503
>02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,
6069207-6069291,6069421-6069580,6069667-6069743,
6069848-6069898,6069979-6070069,6070167-6070468,
6070549-6070830,6070911-6071388,6071457-6071560,
6071647-6071809,6071895-6072017,6072099-6072217,
6072304-6072636,6072713-6073003,6073088-6073171,
6073260-6073393,6073478-6073705,6073795-6073966,
6074062-6074316,6074408-6074668
Length = 1444
Score = 32.3 bits (70), Expect = 0.53
Identities = 19/100 (19%), Positives = 41/100 (41%)
Frame = -1
Query: 824 RTRYYEESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYPILADISESLDYIHFSLV 645
RT +Y E G YS + ++ +P + + I+Y ++ + +
Sbjct: 1252 RTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLIGFDWTVEKFFWYMFF 1311
Query: 644 LWSSYIYAEQQAIAIMVFVKNGLNAAIVNLYITCIYVMLA 525
++ +++Y + + N AAIV+ CI+ + A
Sbjct: 1312 MFFTFMYFTFYGMMAVAMTPNSDIAAIVSTAFYCIWNIFA 1351
>02_02_0654 - 12662931-12663200,12663296-12663550,12664097-12664268,
12664354-12664581,12664727-12664860,12665018-12665101,
12665332-12665538,12665641-12665973,12666175-12666281,
12666439-12666593,12666778-12666810,12666924-12666972,
12667152-12667312,12667413-12668313,12668391-12668481,
12668558-12668749
Length = 1123
Score = 31.9 bits (69), Expect = 0.70
Identities = 26/113 (23%), Positives = 46/113 (40%)
Frame = -1
Query: 824 RTRYYEESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYPILADISESLDYIHFSLV 645
R YY ES G YS S + V ++ I IIY ++ ++ + +F
Sbjct: 928 RAVYYRESAAGMYSPLSYAFAQASVEFIYNIIQGILYTVIIYAMIGYDWKASKFFYFLFF 987
Query: 644 LWSSYIYAEQQAIAIMVFVKNGLNAAIVNLYITCIYVMLASGVLRSYKGFEDW 486
+ SS+ Y + ++ + L A I+ + ++ + A G L K W
Sbjct: 988 IVSSFNYFTFFGMMLVACTPSALLANILITFALPLWNLFA-GFLIFRKAIPIW 1039
>02_02_0620 +
12210812-12210997,12212397-12212474,12212744-12212848,
12212998-12213022,12213214-12213266,12213523-12213635,
12213777-12213801,12214560-12214601,12214666-12214726,
12216027-12216043,12217143-12217257,12217431-12218659
Length = 682
Score = 31.5 bits (68), Expect = 0.93
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = -1
Query: 788 YSGASLLL--SWNIVSLPFSCITSFASAAIIYPILADISESLDYIHFSLVLWSSYIYAEQ 615
YS +LL ++ S+PFS + + YP D +ES DY+ F L+L S+ Y +
Sbjct: 332 YSRIKVLLRNGESLTSIPFS-VAGHSWTIRFYPN-GDSAESQDYLSFYLILDSANSYDVK 389
Query: 614 QAIAIMVFVKNGLNAAIVNLYITCIYVMLASGVLRSYKGF 495
+ + KNG + + + + T + G L Y F
Sbjct: 390 VIFSFELLGKNGRSVSSYS-FTTDLRTFSYKGSLWGYNKF 428
>08_02_0520 - 18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/140 (18%), Positives = 56/140 (40%), Gaps = 2/140 (1%)
Frame = -1
Query: 824 RTRYYEESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYPILADISESLDYIHFSLV 645
RT +Y E G YS +V LP+ + S I+Y ++ E+ + +
Sbjct: 1315 RTVFYRERAAGMYSALPYAFGQVVVELPYVLVQSAVYGVIVYAMIGFEWEAKKFFWYLYF 1374
Query: 644 LWSSYIYAEQQAIAIMVFVKNGLNAAIVNLYITCIYVMLASGVL--RSYKGFEDWLHYLT 471
++ + +Y + + + A+IV+ + I+ + + V+ S + W +
Sbjct: 1375 MYFTLLYFTFYGMLAVGLTPSYNIASIVSSFFYGIWNLFSGFVIPRPSMPVWWRWYSWAC 1434
Query: 470 YITHTRYASIFLHRTVFKQP 411
++ T Y + K+P
Sbjct: 1435 PVSWTLYGLVASQFGDLKEP 1454
>06_03_0437 - 20765682-20765951,20766040-20766294,20766374-20766545,
20766964-20767097,20767205-20767288,20767369-20767659,
20767867-20768214,20768321-20768496,20768579-20768695,
20768780-20768936,20769110-20769225,20769323-20769483,
20769567-20769883,20769969-20770250,20770347-20770648,
20771977-20772067,20773203-20773256,20773723-20773812
Length = 1138
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/87 (20%), Positives = 38/87 (43%)
Frame = -1
Query: 824 RTRYYEESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYPILADISESLDYIHFSLV 645
RT +Y E G YS ++ ++ +P+ + + I+Y +++ + + F V
Sbjct: 943 RTVFYRERAAGMYSAMPYAIAQVVMEIPYVFVQTAYYTLIVYAMMSFQWTAAKFFWFFFV 1002
Query: 644 LWSSYIYAEQQAIAIMVFVKNGLNAAI 564
+ S++Y + + N AAI
Sbjct: 1003 SYFSFLYFTYYGMMTVAISPNHEVAAI 1029
>01_05_0703 - 24404580-24406373
Length = 597
Score = 31.1 bits (67), Expect = 1.2
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Frame = -1
Query: 806 ESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYPILADISESLDYIHFSLVLWSSYI 627
E+ G + AS + S V LP ++ AA +Y + E + +FSLV+W +
Sbjct: 403 ETSRGAHRVASYVASNAAVFLPLLLASALLYAAPVYWLAGLAREPGRFAYFSLVVWLVML 462
Query: 626 YAEQ-----QAIAIMVFVKNGLNAAIVNLYITCIYVMLASGVLRSYKGFEDWLHY 477
A A+A V N L A ++ + +AS + Y F +HY
Sbjct: 463 TANSFVACFSALAPSYIVANSLIAGLIGCFFLFSGYFVASKNIPRYWVF---MHY 514
>06_03_0179 - 17604561-17606435
Length = 624
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/120 (18%), Positives = 53/120 (44%)
Frame = -1
Query: 806 ESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYPILADISESLDYIHFSLVLWSSYI 627
E+ G Y +S + +V LP+ + +A +Y ++ + + + F +V+W+ +
Sbjct: 430 ETASGLYRLSSHAAAATLVFLPYLLAVALLYSACVYFLVGLCASAAAFAAFVMVVWAVVL 489
Query: 626 YAEQQAIAIMVFVKNGLNAAIVNLYITCIYVMLASGVLRSYKGFEDWLHYLTYITHTRYA 447
A + + F + + A + + ++ L SG S + ++ Y++ +YA
Sbjct: 490 TANSFVLFVSSFAPDYI-AGMSLVSVSLAGFFLFSGYFLSRGSMPPYWVFMHYVSPYKYA 548
>01_03_0179 + 13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/106 (18%), Positives = 43/106 (40%), Gaps = 3/106 (2%)
Frame = -1
Query: 866 FVSIMNTICLYGPY---RTRYYEESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYP 696
++ I N+ C+ RT +Y E G YSG + LP+ + + ++Y
Sbjct: 1209 YIGIQNSGCVQPVVVVERTVFYRERAAGMYSGFPYAFGQVAIELPYILVQTLVYGVLVYS 1268
Query: 695 ILADISESLDYIHFSLVLWSSYIYAEQQAIAIMVFVKNGLNAAIVN 558
++ +I + ++ + +Y + + N AAI++
Sbjct: 1269 MIGFEWTVAKFIWYLFFMYFTLLYFTFFGMMAVGLTPNESIAAIIS 1314
>12_01_0833 - 7730761-7731030,7731171-7731425,7731565-7731736,
7731873-7732106,7732362-7732495,7734116-7734199,
7735086-7735376,7735566-7735898,7736351-7736424,
7736558-7736653,7736876-7737029,7737118-7737221,
7737325-7737485,7737774-7738087,7738950-7739231,
7739909-7740210,7740513-7740713,7740924-7741014,
7741424-7741500,7741595-7741754,7742026-7742110,
7742194-7742288
Length = 1322
Score = 29.5 bits (63), Expect = 3.7
Identities = 30/150 (20%), Positives = 58/150 (38%), Gaps = 3/150 (2%)
Frame = -1
Query: 824 RTRYYEESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYPILADISESLDYIHFSLV 645
R+ Y E G YS + + + +P+ + + I YP + + + F
Sbjct: 1127 RSVMYRERFAGMYSPWAYSFAQVAMEIPYVLMLALLFMLIAYPTIGYAWTAAKFCWFFYT 1186
Query: 644 LWSSYIYAEQQAIAIMVFVKNGLNAAIVNLYITCIYVM--LASGVLRSYKGFEDWLHYLT 471
++ + +Y M+ V N + ++Y + Y+ L SG + W +L
Sbjct: 1187 MFCTLLYFVYFG---MLIVSITPNLQVASIYASSFYMTQHLLSGFVMPPSQIPKWWIWLY 1243
Query: 470 YITHTRYASIFLHRTVFK-QPTFNILPYSD 384
YI+ + L T F + NIL + +
Sbjct: 1244 YISPMSWTLNLLFTTQFGFEDNSNILVFGE 1273
>07_03_0635 + 20151861-20152249,20152589-20152709,20154914-20154996,
20155819-20155903,20155987-20156277,20156555-20156645,
20157380-20158280,20158401-20158561,20158759-20158862,
20159040-20159205,20159283-20159378,20159694-20159800,
20160443-20160775,20161393-20161599,20161774-20161857,
20162887-20163020,20163166-20163393,20163541-20163712,
20164301-20164555,20164647-20164919
Length = 1426
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/92 (17%), Positives = 41/92 (44%)
Frame = -1
Query: 824 RTRYYEESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYPILADISESLDYIHFSLV 645
RT +Y E G YS S + V +S + +IY ++ ++ + +F
Sbjct: 1230 RTVFYREKAAGMYSPLSYAFAQGFVEFCYSAVQGVLYTILIYSMIGYEWKADKFFYFLFF 1289
Query: 644 LWSSYIYAEQQAIAIMVFVKNGLNAAIVNLYI 549
+ +++ Y ++ ++ + + AA++ ++
Sbjct: 1290 MIAAFAYFTLFSMMLVACTASEMLAAVLVSFV 1321
>11_06_0223 - 21419128-21419397,21419493-21419747,21420243-21420414,
21420530-21420757,21420916-21421049,21421309-21421392,
21421554-21421760,21421871-21422203,21422343-21422449,
21422823-21422988,21423127-21423230,21423347-21423507,
21423595-21424495,21424642-21424732,21424837-21425127,
21425491-21425575,21425665-21425747,21427653-21427773,
21427785-21428260
Length = 1422
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/119 (18%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Frame = -1
Query: 872 TYFVSIMNTICLYGPY---RTRYYEESQEGHYSGASLLLSWNIVSLPFSCITSFASAAII 702
T+F+ N I + RT +Y E G YS S + V + ++ + II
Sbjct: 1208 TFFLGAANCITVQPVVSIERTVFYRERAAGMYSSLSYAFAQACVEVIYNILQGILYTIII 1267
Query: 701 YPILADISESLDYIHFSLVLWSSYIYAEQQAIAIMVFVKNGLNAAIVNLYITCIYVMLA 525
Y ++ ++ + +F + +S+ Y + ++ + + A I+ ++ ++ + A
Sbjct: 1268 YAMIGYDWKADKFFYFMFFIVASFNYFTLFGMMLVACTPSAMLANILISFVLPLWNLFA 1326
>07_01_0663 + 4975950-4977688,4978183-4978528
Length = 694
Score = 28.3 bits (60), Expect = 8.6
Identities = 25/139 (17%), Positives = 60/139 (43%)
Frame = -1
Query: 866 FVSIMNTICLYGPYRTRYYEESQEGHYSGASLLLSWNIVSLPFSCITSFASAAIIYPILA 687
F S + + + R + E+ Y ++ +++ + LPF + S A AAI++ L
Sbjct: 485 FFSSNDAVPAFIQERFIFIRETSHNAYRASAYVVAGVVTYLPFLLLQSAAYAAIVWFALR 544
Query: 686 DISESLDYIHFSLVLWSSYIYAEQQAIAIMVFVKNGLNAAIVNLYITCIYVMLASGVLRS 507
+ +++F +++++S + + I V N + + T ++ + L S
Sbjct: 545 LHGQ---FLYFLVMVYASLLSTNSFVVFISSVVPNFILGYAAVIAFTALFFLFCGYFLDS 601
Query: 506 YKGFEDWLHYLTYITHTRY 450
+ W ++ I+ +Y
Sbjct: 602 HSIPVGW-KWMNTISTMKY 619
>02_05_0408 +
28720508-28721052,28721346-28721430,28721520-28721604,
28721775-28722019,28722250-28722501
Length = 403
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 175 IIPTENANDTPRLKFKLKSPAKLMSPVKLFDVNRSV 282
+IP +N R+K +K K +PV LFD S+
Sbjct: 256 LIPDDNEGKVLRVKLIMKEGVKNFNPVYLFDEGSSI 291
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,978,814
Number of Sequences: 37544
Number of extensions: 415348
Number of successful extensions: 1067
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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