Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17i07
         (575 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052067-1|AAK93491.1|  360|Drosophila melanogaster LP12301p pro...    28   7.9  
AF002212-1|AAD00902.1|  360|Drosophila melanogaster sorbitol deh...    28   7.9  
AE014297-536|AAF54080.1|  360|Drosophila melanogaster CG1982-PA ...    28   7.9  
AE014296-3097|AAF49199.1|  530|Drosophila melanogaster CG18136-P...    28   7.9  
AE001572-2|AAD19792.1|  360|Drosophila melanogaster sorbitol deh...    28   7.9  

>AY052067-1|AAK93491.1|  360|Drosophila melanogaster LP12301p
           protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 334 VMVPKTIGGKPYPAVDLCG 390
           V+V KT+GG+P  ++D CG
Sbjct: 231 VLVQKTMGGQPDKSIDCCG 249


>AF002212-1|AAD00902.1|  360|Drosophila melanogaster sorbitol
           dehydrogenase protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 334 VMVPKTIGGKPYPAVDLCG 390
           V+V KT+GG+P  ++D CG
Sbjct: 231 VLVQKTMGGQPDKSIDCCG 249


>AE014297-536|AAF54080.1|  360|Drosophila melanogaster CG1982-PA
           protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 334 VMVPKTIGGKPYPAVDLCG 390
           V+V KT+GG+P  ++D CG
Sbjct: 231 VLVQKTMGGQPDKSIDCCG 249


>AE014296-3097|AAF49199.1|  530|Drosophila melanogaster CG18136-PA
           protein.
          Length = 530

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -1

Query: 566 ILHPSQVAGSLRTCLGC-RQLLAAAKVR*GYHVAK*CS 456
           +L P   +  L  CLGC R LLA  K R  YH    CS
Sbjct: 80  VLGPKVASAPL--CLGCHRNLLAPGKPRGNYHKCSSCS 115


>AE001572-2|AAD19792.1|  360|Drosophila melanogaster sorbitol
           dehydrogenase protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 334 VMVPKTIGGKPYPAVDLCG 390
           V+V KT+GG+P  ++D CG
Sbjct: 231 VLVQKTMGGQPDKSIDCCG 249


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,368,030
Number of Sequences: 53049
Number of extensions: 436245
Number of successful extensions: 900
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)